| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_2553810
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_39546 |
1 |
1084 bp |
AK248344.1 |
Not available |
Available |
None |
CDS Structure of MLOC_39546
Contig Sequence (4651 bp)
>contig_2553810 4651 assembly3_WGSMorex_rbca.fasta
GAGGAGAGTATCATCTGCATATTGTAGGCTAATTACCCCACCAGGAATAGCATAATCAAG
CAACCCAGAGATCAGTCCCTGACCAGCAGCTTTGTATAACATCTTAGAAAAGACATCGGC
AACTAAATTAAAAAGAACAGGAGATATTGGATCCCCTTGCTTAAGCCCCTTACCACTCAT
AAAGTAAGGGCATGTAGTATCATTCAATCTAACACTAAAAGTATTTTGAAATAAGAGACA
CTTGATCCAAGAAATTCACTTAGGGCAGAAACCCCTAGAGTGAAGCATTTCAAAAATAAA
TCCCCAACTAACTCTATCATATGCCTTTTCATAATCTAATTTGAGCACAAGTCCAGGTCT
ATTAGATTTTTTTTACCTCATGAATTACTTCATGAGCAAGGACCACACTTTCCAGAATAT
ATCTGTCTTTGATAAAAGCAGTTTGATTTGGGAAATCAGTCTATTACAAATAGGAGATAA
TCTGTTGGTAAGAACTTTTGACAAAATCTTAACCACACAATTGCTAAGACTGATAGGCCT
AAACTTTTTCATGGCATTGGCTTCTGGCTCCTTAGGGAGTAAAATAATTAAAGCAAAGTT
CAGTCTATGTAACTCCAAATTGCCTTCCTCAAAATCTTTCACCAGGGCCATAAGATCAGA
CTTGATCAAAGCCCAAAAGGACTGATAAAAGAGAAAAGAAAGGCCATCAGGACCAGGAGC
ACCTATTTACTGGAGTTATCTTTTTAATCTGCAATAAGTTTTGTCTGAAATCAGACTTGG
TAAAGTTTGATCGATTATTAATGATTACAATATTAATTCTATATTGTTAGATGCTTCACA
TAATTAATTTTCCAATTGTATATCTTTAGTGTCATAGATATTGATATACTTTAGTCTGAA
CTTGGTTCAACTTCGAGTCTTTGACCTAAAGCAAATTAAAAAAAACAAAGAGGTACACAC
AACCCGTGGTTGAATGGTTAAAGAGACTGTGGTATTGAAATCAGAATTTAAGTCTCGATG
CTCGTATTATTTATGTATTTATTTTAAGATTTTTGATGATCTGCATTCAGGTAGGAGACG
TTCTCATCGGCAACGAGACACTTACAATGACTTTGTAAATCATAAAGTGATATGCCGCTT
CAGTCTTTCAAAGATGTTCATATGAATAGGGTGCATGTTGCGTGCATAGGGGTGAGTATT
GTTAAGCTTCATGCACTAGCCAACGCAACCAAAAGTACAAAATGATGGAAATGGCTATTG
CAATCCACATATACTGTAACACATCCTCTCGCGTGTTGCGAGGAAGACAAGTAAAACACG
TGCAACTGGAAAAGAGCGACGACGCACGAAACTCATGTATGATTCAAAGAGGCCTCTACG
TTAATACAAAGGGAGGCTACCAACAAGGCATGACTCTCATGTGTTGCGGAAAAGACAAGT
CAACACGTGCAACCAGAAAAGAGCGACGACATGCGGAACTCACGTATGACTCAACCTCTA
CGTGAACACAAAGGGGGGCTATCAACATTTTTTAATAAATTGTGAAAGTTAGGACTTGAA
CTCAAGATCTTAGTCTGATATCATGTGAAGCTTCATTCACTAACCAACACAACAAAAAAT
CCGAACTAATAAAAAAGACTAGCAATCCACATATACTCCCTCTCACGTGTTACGCAGAAA
GTCAACACATAGACAAACTCAAAGGTATAGCTCAAGAGGCCTATACATAAACAAATAGAG
GGTGACAACATTTTTTGAATAATCCGCGAAAGCCAGGACTAATGTATGCTACATTTATGA
TGTATAGTATATCATATTCCCTTCCTCTAAAAATACTTGTCATAAAAATAAAATATATAT
AGATGTGTTTTAGTTCTAGATAAATTCATTTTCATGTATTATGTGACAAGTAATTCCAAA
CAAAGAAAGTATGATGATACAATATGTGACCTTATTTATCGTCATGTATGATACATAATA
ACATATAACTTACTATGATACAGTATCATAATATGATATTTTTCAATTTTACACAATCAC
AGTTGTCTAGCTAATAAAATAAATAATATCATATGTTGTCTTATTTATTGTCGTACATGA
CACATAGTAACATATAATTTATTATGATACAGTATCATAATGTGATATTTAACCCTCTTT
TCCTTTATTTAATTTTACACAACCACATCTAAATTGTCCGACATCTGAATTGTCTAGTTA
ACATGCATTACAAGCAGCCTAAGCAAAACCCAGGTAGAAAGCACACTTGAACTAAGGAAG
AACATGACGGACCTCAATAAAAGAAAAGACACCAAGTACAAAGTCTGCCAAACTAGTGCA
GCCAATATAACAAGAAGCGCATCAGTAAAACATGACGGCAAGTAATACGGTTTGACTGGA
GCAGTGACTTTGCATGAATTCTGGATGGATACAATGGCAACAAATTTGTCATGCAACGTG
TGACAAAATATTTTGAAGCGGGGAAAGTCAAATTCAAATCAAATAAGAACAAAGACCATC
GAGAATTTCACAATATTATATTTTGGTATGATTCCACAGGGCAAGCAATCTCTCTCAGCA
TTCCATGCCGCAGGCAAGCGATAAAACAGTCGAGCAGTAAAGCATCCAATCACTATTGCT
AGTAAAGTAGGAGCGCAACAATGACCACCAACCAACCAACCAACTCAACAATGACTACAA
AACTACAGCAGCAGCAACACAGGAAATTAGCCCACCCGGACTTTGATGCAAGTCAGAAAA
TAACCAGTACACGGAAAACACAAGTGCAGTGACAACAACCAGCCACAAAATAAGGTAAAT
GGGGGCAAGGGCACCATACCCACACCACGGTGACCACAAACCCCAATATCTGTTTTCAGC
TAAGTCAATAGAATACCATCCATCGGTTTCATTTCAATTCTCACCATATCAACAGGTGAA
TCTATCAGTCCCACGAGCTAGACGCGCCTCCACCATAACCTCCACCACCACCATAACCGC
CACCGCCACCTCCGTAGCCGCCACCTCCTCCACCACCACCGCCCCTTGTGTCACGACGGA
AATCACGTCCACCAAACCGAGCACCGCCACCGCCTGATCTGCGGTTTCTGCCTCCTCCGC
CACCTCCAAACGAGGAACGGGCAGAATAGCGCTCCAGCCACTGAGGAACCTCCTGATTGG
CTTCCTGCATCAGTTCACATAACGGCCTGGCCAGTGACATATTGCCCTCATTGAAAAATG
CAGTTGCCAAACCAGACTTCCCAGCTCTTCCAGTTCTCCCAATGCGGTGAACATAGTCAT
CTATGTCATTTGGCAGATCAAAATTGATGACGTGGGCAACATCTGGTATGTCAAGCCCAC
GAGCAGCAACATCAGTTGCAACAAGGATGGGTGTTGCTCCACTCTTGAAGGATCTAAGGG
CATACTCCCTTTCCTGAATAAGACCAAACAAGCACAAGGAAAAATGAGTTGACCTTGCAA
AACGAAGACAGAAACAACTTATATCATGTAAAAGCATTCAGATATTCAGATGGCAGTCAG
TCGCAATGCATTGTTTCAATAAAAAAAGCATCCCTCATAACTTGGATGTTCAAGATAGAT
ATGAGCTTCCAGAAAGTACTGCAATTCCATATAATGTAAATATACACACAGCTCTGACAT
ACCTGTTGTGTACGATCTCCATGAATACTTGTTGCGGGGAATCCATTTGTATATAACCAG
TTCTCCAAAGCATCAGCGCCCCTCTTTGTCTCCACAAAGACCAAAGTAAGAGAATTCTGC
AAACAAGAAAAGATAAGTTGATGGCCTGTTAAGAATTAATAGCGCCAAATTACACACAAA
AAATAAGAGTTAAATGGTGCCGTTAAAGCATGCTGGTTGTCCTCCTTGAAAATGCAGTTG
CCAAAACTAGACCTCCCCACTAAAAACGCTGTTTAGTGTTTACAAAACATATGGTTTACA
CACAAAGCTTGCAATCACCCTGTTATGCTCTCCAATTTTAAAAGCTGTTGTGAAGAAACT
TGCATGTCTATTATCGGTTTGGTTAATCGGGTAAATTATGTCATACAATAACTTCTCACA
TCAATAAATCATGTCTAACAAAAAAGTAAAAGATGCTGGCCTTGCTCCCAAGCAATTTAA
CCAAACAAGATTACCAGAAAGGTTCAGAATAGTAAACGAACCACTAGTCCAGCAAGAAGT
CCATGAACTAATAGTAGAATCAAAACAACGTAAATCAAAAAAATAGGTAACGAATAGCAC
CTTTCCAGGAACATCATTAGCCTTCTGTGCATGAATAAGGTCCATGAGGTAACTTCTTTT
ATCAGCTTCAAGGACAAACTCTACCCTTTGAGCAATCAAATCGGTACTTGAACCAACTCT
TCCAACAGCAAGGAAGATGTAGTCTGCAAGGAAATCTGACGCCAGACGCTGCAGAAAAAG
AACATTACTGAGAAAACAAAACAGTAGCCAACAAAAAGATAGCATCTCCCTTGCCATGCA
GAAGTAGAAATCTGAAAAAATGCACGTAAGCATCCTCACAATATCATCTCCCTCCGTTCT
TAAATATAAGTCTTTTTAGAGGTTTCACTAGTGGACTACATACAGATGTATATAGACATA
CTTTAGTGTGTAGATTCATTCATTTTGTTCC
