morexGenes - Barley RNA-seq Database

Contig contig_2553807

Source Contig contig_2553807

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_2553807 (2183 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location

Predicted Genes from contig_2553807

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_39545	1	682 bp	AK355128	Available	Available	None

CDS Structure of MLOC_39545

Contig Sequence (2183 bp)

>contig_2553807 2183 assembly3_WGSMorex_rbca.fasta
GGGCATATTTCCAACACCTAGATGGGGGGCTTCACGATGGGCTTTCCGGCACGCGTCGTG
GTGGCGGTGGTGCCTACACCTCTTGGCTGTGCGGGCGGCAATGATGTTGGGATGGGAGGC
TCTAGCATGCTCTAGTGGTCCCGGATCTCGGTTGGTTGGCATGCCTCTCGCTATGGTGTC
TCCTGGTGGTAATGGCGGGTTCCCGAGTGATAGCTCAGCGCTTGGCTCCGGCGACAGCTG
TGCTCGTGGGTGCCGTTTTCTTCATGAAGGAGTAGCTTTGGGTTCCGTTTATGTTCGAGG
GCTCCGGGTGAAAACCCTAATATGATCTCAGGCTCGGCAGCGGTGACGTGTTGCGTCGTC
ACCCTCCTAGGGTCGTTGCTAATGGAGTTGTGCCGTGGCCGGTCGGTCCTTTGCGAGGTG
GTAGGCTAGCTATATGATTTTTGTTGTATCTTTTGATCCGTTGTTTGAGAGTGTGCTTTC
CACTTTGTATCGTTCGGTCGTGTATTGTTCGGTATTGTTGTTTTATCTATAAAGTGATAC
GAAAGCCTTTTTCAAGAATTCTGAAATTGTACGAGAATATCTTAAAGGCATCAAACTGAA
TTTACATTCCAAGTGAGGTGGATTTCTCTGTCTTCTCTATACATGAGGAAATTAACATAC
ATTATACCTGTACTCCTTCTATAAACTAATATAAAAACGTTTAGATTATTAAAGTAGTGT
TTTAAATGCTCTTATGTTAGTTTACGGAGGAAGTACTTCCTTTGTGTGAAAATATTGATC
AAAGAGAATAAATATATCTTGACGTACATTAATTCTAAATACAACTATATGTATCCATGT
ATCCCACAATAGTTTTTGAACGAAGGAAGGGATCATGTAACATCAGAAAATGATTTTCAA
ATAACGGTGACAACGACACATGCATTGTAAGTACGATTCGTGAAAAAGAAAAGTGAGCGT
AGAAGCCATTGATGAGCTTAGGGCATCTTCAATAGTTGTAAGATAGTTGTTGATAAACTT
TGCCACCTAGGATATATGATGATGTGGCAACAAATAAATGAGGAGAGAGAGGAAAGTTGT
ATGTAGATTAACCAATAGCTCTTGCATAAGCTCCGAGGTTAAATAGAGAGCGATTGTATT
TATTCTCTCTTCTCCTATTGGATATTTTAGATGTAATCATTGGGGTAGTTGTATAATTCC
TTTGTTCGTTGATGACATGAATAATTTTACCAACAATACTACATGAACGTTTTTATCAAC
AATTAATATCTAAACAAATTTAAAATAAGAATTTTGGGAGGGAGAGAGTACAAACTACGA
GTAGTTGAGATGGAGAAGCCGACCGGCTGGCGGCGATTCAAAAGCGGCCGTCGGCCCGGA
TACCAGCCGACGACGGACAGGGTGCGCGTACACGAGACCGCCACGTCACCGATCCGCGCC
CCTTCGCTCCTCCACCAAGCAGCGCCGATCTCGCGGATCGCGTGCTTCCTCGACACCACC
CCCAGCCGTCAGATCTGGACGCAGTCCCAAATCCTTTTCCCCAACGGTAACAAGAAACCG
CCTCGGCCCACCCCCACTTATAAATTCCCCACCCACCTCCCGATCTCTTCTCCCACTACC
AAATTCGATTTCACCGCCCGCAGCAGCCGCCCAAGCCGACTTCACCAAGCAGCAGCCGCC
GACGAGCAGCAGAAGCAGGCGCGATGGCCCGTACCAAGCAGACCGCCCGCAAGTCCACCG
GCGGCAAGGCCCCCCGCAAGCAGCTCGCCACCAAGGTCCGTCCCCTCCCCTCCCCTCGCC
AGTCCCCTTCTCCCCCATCCTCCTCTTCTTCACCCTTGTCCCGATCTGTTCGATGTTGTT
TCGCTGACGTTCGGATTTGAAACGCCGTGTTCCCATCAGGCGGCGAGGAAGTCGGCGCCG
ACCACCGGTGGCGTGAAGAAGCCTCACCGCTACAGGCCCGGGACCGTGGCGCTCCGCGAG
ATCCGCAAGTACCAGAAGAGCACCGAGCTGCTGATCCGCAAGCTCCCGTTCCAGCGCCTG
GTGAGGGAGATCGCGCAGGACTTCAAGACCGACCTCAGGTTCCAGTCCCACGCCGTGCTG
GCCCTCCAGGAGGCCGCCGAGGCGTACCTCGTCGGGCTGTTCGAGGACACCAACCTGTGC
GCCATCCACGCCAAGCGCGTCAC