Contig Data
morexGenes
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Map Locations of contig_2553743 (4243 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2553743

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39521 2 1087 bp AK364669 Available Available None
MLOC_39522 1 417 bp AK248623.1 Not available Available None





CDS Structure of MLOC_39521






CDS Structure of MLOC_39522






Contig Sequence (4243 bp)

>contig_2553743 4243 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCAACACCCCTTGGCTTCTCTCTAAGATAGAGAGTGGGGATGGTTCT
TCTCAAGAGAGGTTGTTTGTTCTACGGCGCCATGAAGGAAGGAAGAAGTGATTGACGCAA
CAAAATAGTTAAGATACCTGAAAAGTAGCAAAACAGACTTTTGGGCATGTAAAGTACTCC
CTCCATTCCTAAATATAAGTTTTTTAAGCGATTTCACTAGCAGTCTACATACGGAGCAAA
ATGAGTAAATCTATACTCTAAAATATGTNTATATACATCCGTATATAGTCTACTAGTGGA
ATCTCTAGAAAGACTTATATTGAGGAACGGAGGAAGTATATGGTATAATAGAGTCTACAG
CCAAATTAAACCAAAGAAGTCTTGAGTTCGATCTTACCATAATCAGGGAACCGATAATTT
TTACGTTGAGAGGCGTGTGGAGACTACCATCATTCTGGATCCTCAGTAGCACGTCCACGA
GGTCTTCTTCCTCCTCGCCGCCGCCGGCCAGCCTCCTCGTGCGATGCTTCTCAATGATCC
GGCCGATGAGCTCGCTTATCTCATGGTTTAACGCCTTCATCCGGCGAATTGAGCTACCGA
GCGCACGTGCAAGCCGGGACGATGGAAACAGGTCAGCAAGGCCGAACCCCGAGGCCAGCT
TGATGCCCTCGCGCATGCACCCCAGGAACTCTCCACGGAGGTCCCCGTTCTGGTCGCCCA
TCAACGCCTGCATCACCAAGTCGGTGAGGTGGGTGGTGAGGAGGGAGCTCACGTTCACGG
GCTCCGACGAGGTTGATAGCGATGAGACGATGGAGGAGACTAGGGCGGCGGCATTGGCCT
CGCGGCATCCCCGGAGGGACCGGACTTGCCGCGCTGTGAGTAGCTCGGTGACGCATAGCT
TCTTGAGGCGGCGCCACTGCTCGCCGTGCGGCGCAAGGGAGATGGCGAGGTCGTCTGCCG
TGATGGCGCTGAGGGTGGCGGTGCGTGGCCGCGTCGCGAATGTGGCGTCGTGGGTCTTCA
TGATCTCCTTGGCCGCGCTGGCTGACGAGGCCACGACCACACTGAGCTCCCCTAGGCGGA
GCAACATGAGTGGAGCATTGTACCGGCGAGCGAGGTCACGCATGGCGTGGTGCGGGAGTG
CGCCGACGAGGTGGTGCATGCTGCCGATGACCGGCAGCCACCATGGCCCTGGAGGAAGGT
TCTCGCCCCTGTGCTTGCGCGGCGGTCTGAACATGGCGATGAGGAGGATCGGGGGTAGCA
GGAGGGTGGCCATGAAGAGGTAATTGTAGTAGCACACGACATCTTGATCTTGTTCTGCCA
TGGCCGGGCAGTGCGTCTTCTCTTCTCTGCGCCGGCACACAAAAGAATAGATGCTTTATA
TACGTCAATAAGGACCGGGTCACTCTCTATGCTTAATTCAGATCTCCATTAGCAGCAATC
CGCGCCACTGTTAGGCCTACCCATAATAATGGTTCGACATGAAACGTGTACATTGCATAG
CAGTACAGAATTTAGATGCTTTATATACGTCAATAAAGACTGGGTCACTCTTTATGCTTA
TGTCGACTGATAATTCAGATCTCCATTAACAGCAATCCGCAACGCCGTTGGAGTTGTTGA
GTGGGCCTGCCCATAATAATGGCTCTACATAAAACGTGTACATTGCAATTATGAGTTACA
AGAATTTAGTTGCTGAATTTTGCAGGATATATATATGAGCAATGTTATAGTTAGAGAAAA
GATAACATCATGCGTTTGCAAACCGCCCACACGCATGGATCTACGTCCGTTTGTTGTCTG
CACTAATCTTGACATTTTTGATAATTTTTTTAGAAAGAGACTGGTGTGGGCGTTAAGGAG
TTCGCCCACACGCCTGTTCCGCGCACGCCCACACGTGGCTGCCAACCGGACGTGTGGTGG
AATTGACGTCGCGCCCACGCGTTCGCATGCCTGTCAATTGTCATGTCTTCACAGTGTTAC
ACGGTAACTGAGTCGAACTGTCGTGCACGCATGTCTGTCAGTTGCCATGTCTTTCCGATG
TTACATCGCAACTGAGTAGAACTGTCGTGCCCGCATGTATGTCAGTTGTCATCTCTTCCC
AGTGTTTACATGACAACTGAGTGGAACTGGCGTGTCCGCGTGCCTGTCAGTTGTCATGTC
TTCCCAATATTTACATGGCAACTGAGTGGAACTCGCGTGCCTGCATGCCTGTCAGTTGTC
ATGTATTTCCAGTGTTACATGTCAACTGAGTGGAACTAGTTGTGCCCGTATGCCTATCAG
TTGGCATGTCTTCGCAATAGTACATGGCAACTGGGTGAAACTGTCACGCGGGGGCACGCG
GGGACCGCGAAGTGGCAGGCCGGATGTACGGATCGTGAGCCAGGAGGCCGGACGTATGGC
TGTTAGTTGTTTTATCCACACGCACGCGTGTAGGCTGTTTCTCTTACACACCATACATGA
CGTGTGGGCAACATCCCTTAACATCCATACGTATGGGCGTTATCAGGACCCTATAGTTAG
AGATGATTTGTTACAGACATAACCCAAACACCAAAAAATGGAGAACCGACAACATCGCAA
AAACTCTAAGGAGATCCTACCGAGCACCATTGGCGACTTGATAGCACTTGATTGGCATAC
CACGTCTTAAAACTGAGATACCTCGGTTTAAATAGTATGTGAAAGGTGCGGCTTGTACAT
TTTCACCTACTCGGTAGAGGAGTACATTTCCTCCTTTAATGAAGTGTCGTTTCTAAGTTC
TAACCAATCCCTAAATTTAACCGCATAAAAAAATGTCAAATCTTTCTAATTTTAATTTAC
ATAGTACATTTTAACTACATATTTGCACATATATTAAATCCAACATAATAATTAAGGTTC
ACACAATTCATGAATATTACAAATTCATGGTTCACAAACCAAATTACTTAAATTTAAAGA
TACAAAAGGGCTCAGATGAAGTAAATAGCATGAAAAAAGCAGAGAGCGAAGTTTGTGTAC
CCGGGCACCTTGGTGCCCTTTTTTTGAAAAAAAAAACGAAGAACATAATTAAAAGTTTCA
AAAAAAATTCTTTATTTGGGTCGGCAACCTCGGCCCAAACCCTCTTTTTCTGTTTTTTTT
TTATTTTGTTCTTGTTAGGCACACATGTAAGTGAGACAAAGAGATGTGTGTGAGACAGAT
AGATAGTTTTTTCCATAGGGATGAATGGGCCCATATGTAAGTGACGTACGCAACAAGGAT
AAAAATGTCCAGGAAAAGTCCCTTAGACGGTCAAAGGCCTTTCACCGAAACGACGTGGAG
GGGTATTTTCATAGGCGCACCTGACGTAAGAGGGACAGGTGCATCGGTCAAGTTGTTGAC
TTGTGACCATGAGTTCCCAAAAATGAAAATGAAAATGTTCCGAGAAAAGCCTATTTCATG
GCAGGCTGTTTTTTTACCTTTCTCCTTTTTATAATGGTAGGAAGGAAAGCCCTATGAGGT
CACGGGTTTGAGTCCTGCAAACATTACCTTGTAAACATATAGACAAAGGTTGCTATGCGG
AGCTACATGTACCAGACTGCCATTTGCCTCCTTTCTGTAATGATGATGGATTAGTGATAA
CTCCTGTTGTGTAATGGTGTTTACTGTTTATTGACGCCCAGAAATTGCTCTGTTATTTCT
TCCCTCGAGGCTGTAGCAATGGTAGCACACTAGGATTAATTTAGGGTATTAACATCAGGG
TGTATTACTGGACCATTTATTTACCCGTGTGCTATAACCAACCCGTGTGCTATATGCTGA
AGACTGAAGGCGACGTATACCAAAATGCCGGCGCAGCTGAATCCTACGTATGGCAAAATG
TTTATTTTTTACCCTTGAACTGAGTCAGGTAGTTTTCTGTCCTGCCTGGGTAATTGTAAA
TTCAAAAACACCCCATTACACAACTTATCCTTAACAGTTTACATTTCGCTGCAGCTTCGC
ACAAAACCGGTTCTGATCGTGATCAGAGACACTCAACACTGCTCCAGGTACAACATTGTT
TCAAGTCATCGTTCATGTCAGTTTCCATATTCGCCGCAAAATAACCAACATATGAATTCT
ACAGATTATCATGAGAAAGACAGGCAAAATTATCTAAAGTATCATCGACACCAAGCATGT
TACTGAAGCCGTGCCTGGAGAATCACATTCGCGTCCTTTGCCTGCTACCCCTGTCCTCGT
CTTCTTCCACCTGTTGCGGAAAGGTGAGGAACAAATTATGCTC