morexGenes - Barley RNA-seq Database

Contig contig_2553415

Source Contig contig_2553415

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_2553415 (2855 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location

Predicted Genes from contig_2553415

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_39431	3	1384 bp	AK358231	Available	Available	None
MLOC_39430	1	1069 bp	MLOC_39430.1	Available	Available	None

CDS Structure of MLOC_39431

CDS Structure of MLOC_39430

Contig Sequence (2855 bp)

>contig_2553415 2855 assembly3_WGSMorex_rbca.fasta
CTGCGGCGCGGCGGCAGGGGCTCGGCGTCGCAGTCGGGCAGCACCAAGGCCATGTTCGCG
GCCGCGGACGCGCTGGAGGCGGACGAGGCGCAGGCGGAGGTGGAGCGCGAGGAGGCGGCG
GCCGAGGCCGCGTCCGAGTTCGAGCGCGAGATCATGGGGTCCCGCCTCTACGGCGCCGGC
TTCTGGCGCTCCAACTCCTCCCGCTCCAGCTCTCGCGCCTCCTCCGCGCGCCGCTAGCCA
ACGTCGACCGCCAACGTCGATCGGCGTACTCTTCTTCTTCTCCGTCGCGTCGAGTGCGTG
TGCTCCCTTCCCTGTGCCCGCTGTCGCGTTGTGCTGCGTCACTGCGTGCGCGTGGAAAGA
TTTGCCCCGTCTCGTCTCGTCTCGTCTCGTCAGGTGTGCGTGTGTTAGTTTAGTTTGGGT
TTAGGTTAGCATCCTGGTACAGCAAGCGATCGCGCACACGTGCGTGCGTGCGATCTTGGC
TGGCTATGTTGTGTCGCTGCTGCCTGAGGATGGATGGATGGATGGACCAGTGGAATTGCT
TGGCTTGGATTTGGAGAGAGGAAATGTGGTCCTCCTCAACTGCTCATCGTCGAGCAGCGT
ATGCTGTTGCTGCTGCCACCTGTGGAGCTCGAATTGCTTGCATTGCATTTGCATGGCGTG
GTCAAACAACCTAGTAGTAGCAGTGATATTAATATATTAGAGCTGGCAAATCTTTTCAAG
GGATTGTATGGGCCTAATGGCCGTCAAAGGTAAGATTACCATTTGCCAATGTGATACGCC
CGTACTTTTTAGACTGCTATAGTGCAGTTATGAATCATGGGAGCTCATGATACGCTCGCT
TTGTTTGCATATATCTGCTTCTGACACTGTTCAGTGCTCCTTTTGATTTCGAGTATTCAT
TCAAAGGAATCTCGTAGAAGGATTTTTCTGGAGGCATCGGTTCCTTGCGAATTTTCCCAT
TCATAGCCTGTTTGACTCGTCGTAGGATTGATATTCTTAGGAATATTCCGTGAGGATGGC
TCTGCACTCTAGATTTTTGAAGAAAAAAAATCCATCCACTCAAACCTCTTCGTACAGTTT
ATTTTCCTTTCCTGTGGCGCCAAACTCTCTTGCCCAAATTCCTACAGTTTTCTAATCCTC
TAAGATTCGAGATGACATGCCACCCCAATCCTGTATTTTTCATGTATTTACGTTTTGAAA
ATCCTGCGAATCAAAGAGGCCCTTACTTTCTGTTCATCCCAGCTCGAATTTCTATCAGAT
TAGCACAAAGGCCATGAGGGTAACCACTTAAGCTACATGTTAAGAGCATAGTCTGAACTT
TTTTTTTTTTTTGAGGGATGCATATTTTTTCAGATAAACAGGGATGCATATTCTGAATTG
GCCAGAAATTGAAACATACTTTATGAGACAAACGAAAATAAGGAACGCACTTAACAAGTA
TAAATTCTGAAAGAGCGAAGCATTCTTCGCTAGTGACCCCAGGGACAAACTAAAATGTCA
GTGAGTTACAGATACTACTACGAAAAGGCTGAAACATCAAGCAACTCTAGGTTGCTTCCA
AGACTAAATTTATTTGGACCAAGCAATGAGTTTCTAACGGCATTCGTGGATTTCGTACCT
TATTACCCAGATTCCTTGGCATAGTCAAAGACGGCAATGAAGGGCATGAGAACGGATCCT
ATCCAAAGCTTGCCATCTTTCTCCTCCACCTCGCTTACGGCTCTCACCACCTGCCCTTTA
GTGTCCTCCAAGATGTCGAGCACCTCGCCCTCGGGGCTGTACTTGATGATCAGCGCGTGC
AGGTTGCCGCCGATCTGCATCAGGTAGTGGTACTTGGCGGGGATCGGGAGGCTGAGCAAG
AACTTCCTCAGCTGCACGCGGTGACTCAAGAGCCGGGCGTATGCGCTGCGCCGGCAATGG
ATTGCTACCCAGAATTCGCCCTTGTCGTTGGTCCTCACGTTGTCCGGGAACCCAGGCAGG
ATGGCGAAGAGATCGACGGTTCCTGCCTTCTCACCTTTCAGCCAGTATCTGCTCAACCTG
TTTCGATAAGGGCAAAATAATCAGTGTCTGAATTGAAGTACATTTAGGACAGTCTGAACC
AAATGGAGAGAATAGTATACAGACCTTCCACGAGATCCTTCACAGAAGACGAAGAATGAA
CCGTCCTTGCTTAAGCTCACTCCATTGGGAAATTGGAGGTTGCGGTGAAGGACTGTTGTT
TCCTTTGTTTGTGGATTGTATTTCAAGAGCCTCCCAGAGGCATCTCCAGAGAAAACCAAC
TGCATGAAATGCCTGCAAATGAATGGACATACTAGTAATTAGTTCCAATTTCCAACACTG
CTGCACCTACATAATCAAGAAGTCTGGCTCGACGCCTGTCAGTCTACCCGGCAATCATCA
CAAAGAAAACGAGAACAGCTCACACGCTTGGTCTGTTCCTCATGTGGAGCAGAGTTTACT
TAGGGTGTGTTTGGTTTGAGAACCAAAAGACATGGCATGTCATGGTCTCGTTCTGAAGGA
ATGGGTTGGTTCCATTGTGTTCGGTTGAAGATAAAAAATGTCATGGGTTCGTTCCATTCT
TGTGTTTGGTTGGTGATATGAAATGAGAAGAATATGACTCAACTCACCTTGTGGGGTTTT
TCTTTTTCTTTTATCAAAATATTATATAAAATCCAGCAACATTTCCATTGTATTTTTTAT
TTTAACAATTACCAGGGATGTTTTCTTTTTTTTCTTCTATCAATAAGAGAAGAATAACCA
GGTGATTCCTTCGATTTGGTGGAATCGCTTGATGAAGCATATATAGGGAATATTCCTTTT
CTGAGGATCACCCGGTTCCGGTTCCATCCTCAACT