Contig Data
morexGenes
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Map Locations of contig_2553346 (3358 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2553346

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39421 1 1661 bp MLOC_39421.1 Available Available LOC_Os10g40810.1, FRAME:-3, EVALUE:3e-108, 13110.m03788 protein GATA zinc finger domain containing protein, expressed
MLOC_39420 1 128 bp None Available Available None





CDS Structure of MLOC_39421






CDS Structure of MLOC_39420






Contig Sequence (3358 bp)

>contig_2553346 3358 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCCCACCCGTTCGTCGCTCCAGCGGCGGTGCATGCTTGGGGAGCCC
TGGTTCATTTTGGTTCCTGTCTAGGTGTAGGCTTAGTTTGTTCAGACGACGTTGCTCGGT
TGATGTCGGTGTCTTTGCCAGGAATAAAAGTTTTCGGACCACCACTTTGGCGGTGTCCTA
CGATGGTGTTGAGGAGTCGCGGATTTTTATCCAAATAAGGCCTTCAAAACGGCGGTGGAG
ATCTTACCGAGGGCCATGTTTCTTCGTCTTGGTCATGTCGCGTCAGCGGTTCCTCCAACG
TTGGCGCGAAGCCGAAAGTGTTGGTGCTGGAGGTGGTCAGTGCTCGGTCGACAATCTTGT
TCAAGGTATGATGCACCTAGAGTGTCTTCAAAGGTGGAAAATGGTAGCCGCTTATGGAGC
CCCTCGGCGGCATTGCCGCATGAAGTCTTCAGAATCGTCATCCAAGAGGAGTGGACATTT
GCTCCGGCCGACAATCCACGCGACGTTGTTCGCGGCAGCGCCTCTTCAGAGGCTTTTGCT
GCTATGACTTTCTCTTGGATATCGACTTAGTGAAGGTCGTTTCTTCTCCTTCTCGATGAA
TGCTTCGGCGACGGCGGTGGCTGAAGATTGTGGTCGTTTTGTTGGTGGTTGCAAGGGCCA
AGAAGTTTTTTCTATTGCTTCTTGTAATTTCGCTTGGTGTGCTGTCTCTTTGGATTTCCC
CTCCAATTTGCCACGTATGTTGCAATCTGCTGATATTATTAATATAAACGTGGCACTTGT
ACAAGAAAAAAAAAGGTGGTCGCAGCATGCGGACGTGCGCCCAAAGGAAGACGCACATGG
AAGTCGGCAGGTTGCATTGCGCACATCTGCACTCCATGGCCGCAACGGGGCTCCGCCCCA
ACCCATCTTTACTTGTCCTGCCTTCCTGCCCAGCCCCACGGAGAAGCTAAACGGCAAAGG
CAAAAAAGTAAGTAACACTCCTGCCACTCCCGCTAATAAGTGAAGAGAGAAGAGAAGCGT
AATGAAGGGGGGCACCATCACGTGACCAGAACGTTGCCCACTCTTTCCCCTGCCGGAAAG
CTCCACGATGGGCCCCAACTCACGTGCTGACCCACCCACCATTCCCGGCTCTCACACTCG
TCTTTCTTTTTCTCGCCATTAAAAAGCTTGACCTACCGGTGAGAAATAAAGTCCGTGGAG
TAGTAGGGCAGTTACCACGGAGAAAAGCTGCAGCAACCCAATGACGCGAACATACTGCCG
CTAACGAGAACGAGCAGACCGAACGCGCAGCACTGCTCTCAACAGTCATATACTCATATT
GGAGTAGTACAGTTTAGTGGCACTTGAGCTTCTTGCTTCCTCAAGTTTTACCAAGCAAAA
TACAACCAGTTTGATTGTTCTTGTAGGAAGCCGAGAAAAATCATAACAATCAAACAATAA
TCCGTGAAACTATGGTAGATTTTGGGCGTCCTTCGTTAGATTAATAATCTTAGCGTGATT
TTATGAAGTTTTTGTGGAATGGTGGATTTGGATTGGCCACGATGGCAATTGTACCAACAG
AACTTGATATTCATCACTCGTAGTCGAACAAATTAATTAACAAAAAGATGCAAGATATCT
GGAGGGAAAAAGAAAAAGGAGAAAAAAGTGAAGAAAAAGAGGCTTGAGGATTTTGCAAAG
GGATCTAGCTAGCTAGCTACGCTGCGTGCAGGCGCGCGATGATGCACGGCTAACCAGCTC
CATCCGTACGACCAGCTCAAGCGATCAACATATGCCGTAGTCATGGAACATGAGCTCCGG
CTTCACGGTCACCCCGGGGCCGGGGCCAGCCGCCGCCGCGTCGAGACGGTGGCTGCCGCG
GATGAGAACGAGCTCCTTCTGGCGGCGCAGCTCCATGACCTTGCGGTGAGAGTTGGAGTG
TTGTGTGAGCAGGAAGGTGGGGCTTGCCGCCGGCCGGTACTCCGGCACCAGCCGCCCTGA
CTTGAACCTCACGCCGCACGCGTTGCACAGCGTCTTGGGCCCCAGCGGGCCCGTTCGCCA
TTGCGGCGTCTTCTCCGACGCGCAGTGCGTGCAGCGCCGCACGCCGCCTTCCACCAGGCC
CACCTCCCCGCAGGCAACGGGTCCCTGCTTCTTACCGCGGCCGCCACAGTTGGAGCCGCT
GGGTCGTGCCGTCGTCGAGGACGGCAAGTCGGACGACGAACACGAGGACGACGGCGATGG
CTGCGAGGGCGGGCGCGGCATGAGGGAGTGCCATGCTGCGGCCGCCGCGGCGCTCGCCCG
CGACCGCTTGCTTCGTGCTCCGCGGCCTGGCAGCGCTGTGACGCAGCTGTCTGGACCAGC
CGCGCTGCCACCGCCGCTGTTGTTCGCCGCGTTTGCCGCCGCCATTGCCGCATGCGCAGC
CGATGAGTAATTCGGCATGTCCGAGTAGGAGTCGTCCACGAACTTGGACAGCCATTCGAG
CTCTGCGGCTTCCTCGCTCTGAAACACACACATATACATTACATGTAAATTCAGGTAAGG
TGAGCAGTTCGATCGATGATCACGAGCGTCAGAATGCACACGATCTAACGATCATGCATG
CATGTATGCACAATTTCTTCATATGCAAGCTAATTAAGGGCCATATATGCGTTGGTTAAT
TATGTGGTGCTTACGGGTATGTAGAACTCGTCGGCGAAAGAGAGCATCGACGTCTGGTGA
TCGGACGACGTGGCGGAAGGGGTGGTGGCCGACAGCTCGCCCACGGCGGCGCCGAGGTGC
TGGTGGTGGTGGAGTCCGTTGTCCGGCGCGGCGGGGAAGAAGTCGTGGGCGCCCGCGCTG
GGGAAGTGATCCATAAGCTCATCCACGCGCATGTTGGCGTCGCGCATGGGCTGCATCCCG
TAGAAATGGTGAGCAGCCGCGGAGGCGGAGTAGCCGCCGGACTGGTGGCTCATGGGCGCG
GCGTTGACGTTGGCGGCGTTGTGGTACGATCCCATTCCCATGCCGAGCTCCACGCCCATG
GCCATTTCCCACTCCGACGCCATTCCACGCCCCAGAAGAGCGAGCTAGGTTGTGTACCGC
GTACTTAAATGGGACGAGCAGTGGCACTGGCCGTTCCAGTACGAGTACGAGCTAAGCTAG
CAGTGAAGAGTGTGAGTGCGCGAGAAGGTTTATAAAGTGATGCGAGAGAGGGAGAGAGGA
GGAGGTGAGCTGGGTGGAGAAGAAATAGTGCGCGCTGGGCTTTGAAGAGCGAGCTCCAAT
CAGTCGCCAGTAGCAGGAAGGGCAGTTGCGAGATAATTTAATGGAGACAAGGACAGAGCC
CCAGAGGAGGGAGGGAGAGAGAGAGAGAGAGAGTTTAAGGTGGTGCGATTAGGGGGAG