Contig Data
morexGenes
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Map Locations of contig_2553208 (4413 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2553208

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39391 1 976 bp MLOC_39391.1 Available Available LOC_Os03g38260.1, FRAME:-2, EVALUE:7e-87, 13103.m04154 protein 60S ribosomal protein L19-3, putative, expressed





CDS Structure of MLOC_39391






Contig Sequence (4413 bp)

>contig_2553208 4413 assembly3_WGSMorex_rbca.fasta
CGAGGGACTCAACGAAGTTGAAAAGCTGTTCCTTGAGCTTAGTGAGAGACTTCCTTGTGC
TTCGTGAGGGAGCTCCGGCGCGGCGGAAGAGAAGAGGGCGCGGCGTAGGGGGAGCTGTGG
CATGGCAACGCCGAGGCACAGCATGGGGGAGCTGTGTGGCTTTGCCAGGGATGTGCACGG
GACCACAGGTTCGGTCGGGAAAAGTAAAGGTTTTTTTGTCAAATCTACATGATGACAATT
TTTACCGGACGGAAGGAGTATAATTCAAACATAGTTTGAAAAACAATCAACGGATGGGTA
GTTGTGATGGATCTTGAAATAAGCAGGGTAGGATTGACTCTTAACTCCATAAATACCTCC
AGAGGAAGTGAGAACGAACCCAGTCAATCACTAACATGGGAGGTACAGAATGGCCACAAC
AAATTAATCATCACATCAAGAAAATTTGCACAAACAGAACGTGCAGGTAGGTTCAAAAGC
ATAATATAATACCGTGAACCCAAATGTTTTAACAAACTCTGCTTAAGCATCTCTGAAACA
TCCAGCAGAACAAACACGATATGATATTTAAGGTATCTGACAAGTTGACACAAACACGAT
ATTGCACAGGAAACAGTTCTGAACTTCTGATGTTCCAAAATTAGGCTAACCCTTGATGAT
ACCAGAAAGCTAAAGCTTCAAGTCAGACCTTCACTTCTTGGCCTTCTTTGGTGCCCTGTA
AACAATGCAAATCGGAGAAGGTAAGATAACAGGAACGAAACAAAAGAACTATGTGAAAAT
AGATTCTGGATGCAAATGCTTACGCTGCTGCCGGAGCTGGAGCTGCAGCCGCTGGTGCCG
GTGCATGATCTCTGGGGCCCTGTTTGCCAAATAGTACAAGTCAACCAAATTGTTCTAACA
TCAATTCTAAGAACACTATGTTATCTAAGAACAACAGACAAATATCACCCTGTATAGTAA
GCCCAACTATGATAAGAGTAAGAGATGAAGATACTATCAAATGCCCATTTCTCATTTGAC
ATGCGTAATCATTATGCATTTCAGTAGAAATATATTGCAGCACCTAACCTAACTAACAAA
GAAATAGCATGGCTCGAATGAAAACATCATCTTACCTGGGCCAATCTCTCCTCCCTCCTG
GCAATCTTCCTCTCCCTGCTTGCCTTGCTCTTGGCACGCTTGGCCTCAAACTGGTCAGAT
AGGGTCTTCTCTCTTGCCTTCTCAGCCTTGGACTTGTGGATACTCTCCATGAGGACCCTC
TTGTTCTTGAACATGTTACCCTTGACCTTCAGGTACATGTCATGGTACATGTGCTTGTCG
ATCTTCTTTGCCTCACGGTACTTGCGCAGAAGACGCCTCAGCACACGCATCCTCCGCATC
CACAGGATCTTGGTGGGGAGCCTAGCCTCCCTGGTACCCCTACGCTTACCTGTGCATAGA
GCAGAATCACAGGTTACAACACATATAACTCCAAAAAAGAATACTATCATAGCAATTAAA
GTTGCAGCTACAAACCATATCCAGAGTGACGGCCCTTCTGCTTGGCCTCATGTGCCCTCC
TTGCACGAGACCTGGAGTGGATCTTCTGAGGCTTCCTGATGATGAAACCATCCTTTACCA
GCTTCCGGATGTTTTGCCCTGCAAGTATTAATCAAACAATGCATCACAGTTATGCTCAGT
TATGAATCAATGGCACAGCATAATGAAGAGTGAAGAGGCTTCAATGGATTGAAACAGAAA
TATGAGTTAAAACCAACACAAAAACTGCCTACTATAAGCAAGCAAACAACATATAGCATA
AGAATGGATGTGATTGCAATAGCCTGACAATCAACTGCATGTTAACTACATATTACCAAT
ACAAACTGAGGAACAGAATTGGGAGCTAGGTCCAGGAGATTAACATTCACAAAAAGAAGG
ACAATTGAACCTTAACAGACAAGACTGCTGGTACATGTGCTACAAAGGTAAAATAATACC
TAAACTCTGTAACTCACTAAGCTAATGGAGCAATCTCTTCAGTATAATCCGACTATGGTC
TGTTGTGTTAGTGCACATGAAGGTAAAGGAACACAAAAACCAGCAACTCCATTAGCTTCA
TCGGTAGAAAGTAAAGGGACATCAGAAGCAGCAACTCTATTAGCTTCATCAGTAGAATAA
CTACGAGGAGTTGCCATGACCAAGCTAATGGAGAAACATGCTCCTCACAACTGAACTATA
TGAATATATTAGTAGGCGATACTAGTGCAAGCAGGATTTCTTAAACTAGGTTCGTAATAT
TGAACAACCAGATTAGGATCGACTGGAGCACTACGGATTCGTAGCATCAAATTCTGGCAG
GCAAGCCGGTAAATTTATAACAATCTAAAACACACTTGCAGATGCATAAACCACGCAAAA
GATAAAATAAGAGCAAGCGTGGATGCTCAGTCTAAGTAACTCGCGTTTTTTACAAGTATA
TCTACATGATTCGACGACTAATCTGCTAGAAAACGACATGAAAGTGGCAACAGCACAGTA
CCAAAGCTATCACGGTACATCGGAACAAAATCAAACCCGTAGAGTGGTCAGCCATAGGAT
GTTTCGGCACCAAAATCAGCCACATGAAGAAGGCTGGTCCTGGAAAGCCGCTGTTCAAGA
TCTACGAGCAGGCGCAGCACAAGCAAGGGTCGCTCTATCGGCCTCGAACAACCTAACCCT
CGGAGATGGCCGCCTAGGCCGCAGATCTACGAAACAAGCGAGATAACCGAGACGCGCAGC
GAGGGACAGGGATTGGAGGAGCTCTTACGTGAGTTGGCCATGGAGATCTCGTTGACCTCA
TTGGGGTCGAGCCAGACCTTGCCCTTGCCGCACTTGAGGACGCTCGAGGCCAGGCGCTTC
TGCAGCTTCAGCGACACCATCTTCGCCGCCGCTCTCCTTCTCCTCCTCCTCCCTTACCTT
CCGTCTGGTTGTGGCGCAAGGGTTTGGAAAATGCGGCGCTGGCGGCGCCTTATAGCTCCT
GGGGGATTAGGGTTTCCCCCCTGGCACCAGAGTTGGGCCGGGCCTTTGCTGTGTGGCTCG
CTTTGCTGTCCCACTTGGGCCTACGGCCGGTTATAGTTAGCTGGCCCGTTCAGTCAGAGA
GGAGGGTATCAGATCCTCAAAAGAAAATGTCGGAGAGGATATCAGCAATGTCTGACTTTT
CTTTCTTATGAAACCACGTGTCTCTAGAGGAACTTGTGACGATAACGTGCAGCAGCTACG
TGGAGACTACTGAAAGTAGTACGAAGTTCTCAACCAAGCAAACTTGGCATGCAAGCGTCC
ATTGGCATGCAAACTCCTATCCTACCTCAAAAGTACCGTGAAGGCGGAAGTGGAGTATCT
GAGAACAGTAAAATCGGTAAATATAGTACAAAAAAATCGAAAAAATCTGAAATCTATGAG
CATAAAACATTGATGTTTTTTCTACATATGTGCAAAATTTTATGATGAAATCACATTTGT
GGAGGTGTGGGCAAAAAAACAAAATCATTGCTTCAAAAATAGTGTTTTTGGAAGCATTTT
GAAGCATCATTTTTGTTTTTTTTTTATCTACGCCTCCAGAAATGTGATTTCGTTATGAAT
TTTTGCATGCATGTAGAAAAAACATCAATGTTTTTTGTTACAAAATTTTAGAATTTTTTG
AGTTGTTTTACTACTTTTCGGATTTTACTATTCATCCGAGAGCATATAAGCTCGAGCTCG
CACTTTCGTGTGAAGGCCAAGTTTTGAGAAGTCAGATAAACTAATTGACTGACAAGTCTA
GCCAGTTGGTGAAACAAATTTTCTTATGCACTGAAAAAATAGCTGGATATATAGATGGTC
TTCTTTGAGGAAAGTTTATTTGCGGGAGAAATTTCCAATCTATTCATAAATCATGGCAGT
ACATAGAACATTAGAGGTAATAAAATTACAACGAGACACATGCACCACCGAGCGACGCGC
TATAGGATCTGAAGATGTGTCGTCGTCATCGCCCCTCCCTCGTCGAAGCCGGACAAACCT
TGTTGTAGTAGACAGTTAGAAAGCCTAGTTTTTAAAACCGGACCCAACCGGCGGTCGGAT
CGAAAAAAACGAAACCGGCAGCCTCATCGGGTTTACGCTAATAAGACCGTTCCGCAATCC
GACCTGAGAAAACCGGTCGAACCGTCCGGTTTTCTGAAAAAACAGTGAAAAATCGGGTCA
GTACACCGGGAAAAACCAAAAAAATGATTAATAGAAATTGGGAGAAGTGGGATTCGATCC
CCACGGTCCCATAACCAACTCAGTTATGGTACTTTGTTGTTCACTATATGAGAATAATTT
TATTTAACCATTGTTTCACACTATATTAATGTTGGGGAACGTCGCATGNNNAACAAAAAA
TTTCCTACCCGCACGCAGACCTATCATGGTGAT