Contig Data
morexGenes
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Map Locations of contig_2553111 (4208 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2553111

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39356 3 3343 bp AK371078 Available Available None





CDS Structure of MLOC_39356






Contig Sequence (4208 bp)

>contig_2553111 4208 assembly3_WGSMorex_rbca.fasta
CGCGGCCCACCGTGGCGCCCCCCCCCCCCCCCCCCCCCCCACCCCCGCCGCCGCGACGAC
GGCAGGAGGTGGCTGATGAGGCGCTGCCACCAGCTCTGGAGCCAGTGCAGGTGGGGGAGA
TCACGGCGGATGAGCTGCGGCAGTACGACGGGTCTGACCCCGAGAAGCCGCTTCTCATGG
CCATCAAGGGGCAGATCTACGACGTCTCCCAGAGCAGGTCGATTTCCTTGAGCCCTGTAT
TCTACGGACCTCCATTTTTGGCTCTGTTGCTTCGAATTCAGACCGTCAGCTATGACCACA
ATTTCAATCATTCAGAATTCTGTTCGAAAAATAAATATCATTCAGAGTTCGGTTGTGATC
AACTGATCAGTGGTATCTCTTGTTGTCTAGTACTCCTACAAGCAAAGTTCTCTAGAAAAT
ACTCTCTCAAGTGAAAACATTCTTCATAGTCTCAAAGAGCTGATAGCCTAAACCTGGAAG
CAAATGAATAGTTCTTCTATGCTCGTACCATGTTTGTCTAGCAACCCAAATGAGAATCGT
AGGAAATTGTGCAAAATAAGTCAAAGGCGGTATTTTGAAGAATCATAGGCAGTTGTGCAA
TAAGACGATTAATACACGCATTGACTTGAGTTCATATTTTGTTCTCATGTATGGGAACTG
CAGTGACTTTTTTGGCAAGCCCAAGTGGTTAGCAAAGAAAGGTGTAAGTGATTTCGGTGT
TAGAAGCTATTGGACCAGTTGTTCATGAAATATTTGACGGACATTCAGACATGCATATAA
AATGTACATGCTGCATATAGACTACTAGAGCTTCTCAATACTGATGCCTGGCATAGACCA
TTTCTGCTGTTGGTATGTTTGGAGCTGATATGGGTTCAGTTGTTCAATGTTAATCTGCAT
GGTGTATTTAGAGATTGTATGTTCAAGTTAACTTATTCGTCACTATTCCATATATATTAT
TATCCTCATACTTAAATGAAAAATCCAGTGACAAGTTAATAAACTTTAATGCTCCTTCGA
TCCAAATTAATACTTGCAGCTTTAGTACAACTTAACTAAAGCTGCGACAACTAATTTGGA
TCGGAGGGAGTACTATCATTTGAGTTGCCTTGAGGCTCATGGGAACTACCATGATAAACT
GATAACAGACAGGGAATTGCATGCCTAATTAACTGTATTATATTTTTGCAGTGCACCAAC
AAGGTTAGAACTTCGTTATATGGACTGTTAACTTTTGGAAACTTACTCCAATTTAAATCG
TATGAAAACATAATTTCTTTTTCTCTTCTGGTGTACAATGAGACAACACATATCCCTTCT
CCAAAGTATTAGTGCTATTTTTCTTCCGATCCGAAGTTTTTAACTCAACCTTTCGCCGTC
AAAGATGAAATTGTTAATTTGCTATTTGTGCCATGACATGGTTTTTGACATTGATCTACA
TCACTATTGGCTGTTGCTGATTTGATTTGTTGCTTTGCAGACTGTTCTATGGGCCTGGTG
GACCATATGCATTGTTTGCTGGTAAAGATGCCAGTAGGGCATTGGCGAAGATGTCCTTTG
AGCCACAAGATCTGACAGGTGATGTATCTGGCCTTGGTTCATTTGAGCTTAGTGCCTTGC
AGGACTGGGAGTACAAGTTCACCAGCAAGTATGTGAAAGTAGGAAGCATCAAAGGAACAG
GACCCATAGAAGAGGGTAATGTTAGCACTACCTCTGAAATACAGGAGGAAGCTGCTGCGG
TGAAACTGAATGGAGAGAAAGCACCATGAGACACTACTGGAAATATAATTGACTCTGAAT
TTCGACGAGAAAGAAAGAAATGGAGGTCACTTCTGATCAAGGATCCAAAGAGAGTCAGAA
GCTGGATGCCTCCTAGCTGCTACAGTGCTGTTACCTACATGCATCTGGAGTGTAATTCAC
AGATATACTGTATAGGTTTGTATTCGATGCACCTAGGTATGAAATCTAGAAGTTCGGGTA
TTCGATGCACTTCGATGAGCCTCCAGGTTACATCGATGATTGCTCGACGAAGAATCAATA
GGGAGCTGTTTTCTGTTATGCTATCTGCCAAGTGCCGAATTTCTGTTAGACAACGTGTGG
CCAGCTAACCTAAAGGGACCTTTCGTTAATCCCAGCCTCATGGCTTATGTCACGCACGAT
TCCTGCGTGTAGCGTAGCTTGTTCCGCTGTTCCGTTGCATAGGAAGTTGATGCCAGATTG
TCTTCTTTGATGAGGTGAGGCATGGCAACTGACATATAAGAGCACATTCTTTTTGTGGTT
CAGTTTGTGATACGTCCAAGCGATAACCCTTTTGGTCTTGAGAGAACATGAAGATAACAA
ATTATGAAGTGTCTGTTTGAGATGCATGAATGGTACCGGAATTTCTCATGATTTCACAGG
AAGGCAGTAAATTTGGAGAAACATTGAGGCTGTTTTTGTTTGAAGTGGTAAATGGCATGC
TAACATCCACGGTCCAACACCGACGGACGATATTACTACGGAAAAGATGTCTGAACCAGT
GGAAGTCAAAGGACTGCAGTAGAATTTAACCATGAGCAGCACTGCAGCAGTACCGGTAAA
AGATAAGCCCCAACCACTGGAAAATGCTTCGTGACGAGGAACGATGTTCTCTTGACTTTT
TTGTGTGTGGTGCGTGATCTCTTACCTGTTTGTTTTTTCACACCGTTTCTACTTTCATAA
ATTAAGTTTGGTCTAACACCACTCTAACACTCTACCTTAAACGCACATGTGGGAGGACTG
ACGGGCATAAAGAAGTTAAAGTCAAACGTGTGGGAGGACTGACGGGCATAAAGAAGTTAA
AGTCAAACGTGTGGGAGGACTGACGGGCATAAAGAAGTTAAAGTCAAACATGTGGGAGGA
CTGACGGACATTTTTCTTCTTATTTTTCTGTGGTTCTGGCTGCAATGGAAGAAATTTCAC
ATCAATACCAGACATGCAGGATTTTTCGGGGTTACGAAACTCCCATGATCAATGAAATGG
CGACGGGACTCGGATTTCGGCATCTAGAAAAATACAACCATAGAAAGATTCAATCTTAAA
GGGGGCTCTTGCCCTTCGGGGGGCATAAACTTCATGAGCGAGAGGGGAAAACCTTCTCCC
ACTTAGGAGGGAGGCCAAGGAAGAAGGAGGGCCCCTCTCTTCCATCTGCGTTGGAATGCC
GACGAGGAAACCATCACCACCGCCATCAGTCTCCATCACCTTCATCAATTTAACCATCAT
CTGCATCACCATCTCGATGGTTGTCCATACATCCATAAGCCTTTGTAACCCCCTACCCAA
ACATGTTGTTCGATGTTATAAATTAGTATCCAATGGTTTATCACATTACTATTATTTCCG
AGCAGATCTTTTTTGTCCTATGGTGATTGTGATATAGTATGATTGACTTGACTTCTATGT
TATGTTACTGTCCTTTGATGTACATGTAGATCACATTTTAGGGTTAGTAGTATGTTGAGA
TAACCATGATAGGGTGGTGGGAGTGACATATATTACCAAGCCTAAATATAGGAATTGCAC
GATTAAAAATGATAGTGCTAGGATAACTGTTTGCAAGATAATAAATAACAAAATAAATAA
AAATATAAATAAGATAGCAATTGTAGCAAGTTTGTATTAATGAAAAGATAGACCGAGGAC
CATAGGTTCATTAGTGACATATTTTTCAAAAGCATAACAACGAAGGTAAACAAATTATTG
TTGGGAAATTGACAGATTATGATGATCATTGATAGCATAATCTAATATAGGCATTACAAT
CGTGACACGTAGACCGTTAAACTTACTAACACATACTACTATTATTATAACGTCCAAGAT
GTGATCATATCCTTATTTTGGCTCAAGGGCCTCGACAGGGATAGNNNNNNNNNNNNNNNN
NNNNNNNNNNNGGATATCGTTACAGGTACATGTAAAGAAGATATGAGTATATGGAGTTGG
GTTACACTCGACACAAGCTAATCATAATCATTTCAATACAACATACATTCAATCACCATG
TAGAAGAGCAGGGTCCGACTACAGACAAATCAAACGATAAAAACGACATCCATCCTAGCT
ATCCCAGTTTGTCGACCTGGAACCCATCCTATGATCGATGATGATGATGAAGAAGAANNN
NNNNNNNNAAATCCAAATAGAACAATCATCGCGCTCACGTCAAAGTATCGCTTTACGTGT
ACCTGCAA