Contig Data
morexGenes
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Map Locations of contig_2553047 (3057 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2553047

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39328 4 1403 bp MLOC_39328.2 Available Available LOC_Os09g30486.1, FRAME:+3, EVALUE:2e-75, 13109.m03058 protein fasciclin domain containing protein, expressed





CDS Structure of MLOC_39328






Contig Sequence (3057 bp)

>contig_2553047 3057 assembly3_WGSMorex_rbca.fasta
GGGGCGGGCCCCGGGGCTCGCCTTCCACCCCCCCCCCCCTCATCAACGGCTCCCCCCCCC
CCCCTGTCTATTAGTATCTCTCATCAACAGCTGCCATCCATTATGACATTATCTTTTACT
CTTCCCCATACAACAACTTTTATATAAACGCACGCCCCCCTCTTATCTCTCGCCCCCCAC
CCCCATTCCCACCTCATCCTGTTCGTGCTGCCTTCACTGCTCCCCCGCCGTGCACTCGCT
CAGGTCAGTCTCGTTAACCTGTCTTTCACACCTCAATCCACCGCCGTGGCGCAAATGCTC
AAATTTCCTTACGCTTTTTCGGGTCTCCATGTGTTTGCAATCTGAGCTTAGGGGCGCTCG
ATTTTCAAAAAAATATATACATGCGCGTACATTGCTGCATTTGGATCTGTTCTCCCAGTT
CTTGGCCCAAGGAAGAACAGATCTTCGCGTTCTGTAATTTCGTGCCTCTTATTTCCAGCC
GAAGCAACGAAATGCAGTGTAATCTTGGCCCCTGCTCTCGGATTCAGGAACGAGCAATTT
GTTTGTTTTCTCTGTTCTTGCCATTGTTTTAGCTTTGGAGCAAATTGTTCCGTCCATGAT
GCTGAGATCTGCAGGACGTAAGAGGACCGTTCAGTTCATGCTGAGTAGCAGTTTTTACCA
CCTTTTAATTTTATTTTGGTTGGTAGCACATGTTCTGTAATGCCGGTCAATTCTGCTAGA
TCGGGTCTGGAATGTTTGTCTCTCTTGGTGATAGGGAAAGGCCCAGCAAATTAGCTCTTG
ATGAAAGATCTGATTGAACCGCAAATCCTTTCAGATCGAGAAGCCGCATGCTTCTTGAAA
TCTCACTAGTTCATAGTACTGTGAAACGCCTTGCAGTTCTCAGAAATTGCAGAAACCGGA
AGGACAGCGTGACACTGTTCCTGCGTAAGCCAGGAACCACATTTTAGATCTCCTGTTGCC
CGGTAAATTAAGTAATTACCACGTTTTTGTTGGTGTAAATTCAGGTCCCTATGAAATACG
CGAAAAAGAAAAACCCAGTGCTTAATTCTTGATTGTTCTTGTGTGACCTCAGGGATTTTG
GGCAAAGCAGGGGACCTTCAAGATGAGGCTCAGAGCAGGCGTTTTTACCGTGGCCATGCT
CGCCATTGCCGTGCTCTCCTCCCCAGCATTCGCGCAGAAGACGAAGAGCCCCCCTGCTCC
GCCGGCGGCCGTCCTCCCGCCGTCCCCAGCGCCGGCTCCGGCGCCGCGCCATGTGGACCT
CGCGGATCTCCTGAGCGTGGCCGGCCCGTTCCACACCTTCCTGGACTACCTCCAGAAGAC
CAGCGTCCTGGAGACGTTCCAGAGCAAGGCGAACGACACCAAGGAGGAGGGGATCACCAT
GTTCGTGCCCAAGGACTCTGCCTTCGCGGCGCTGAGAACGACGACGTTCGCCAACCTCAC
TAGCGACCAGCTCAAGTCGCTGATGCTGTACCACGCGCTGCCCAAGTACTACTCGTTGGC
CGAGTTCAACAAGCTGAGCAGCCTCAACCCGGTGGCCACCTTCGCGGGGTCACAGTACAC
GCTCAACCTCACCGACAACATGGGCAGCATCCGGATCAAGTCCATGTGGTCCAACCCCAA
GATCAGCAGCAGCGTCTACTCCACCCGTCCGGTCGCCGTCTACGAGGTGGACAAAGTGCT
GCTGCCGATGCAGATCTTCAAGAGCGACCCGCCGCTGGCCCCGGCTCCCGCGCCCGCCCC
CGACGACGCCAAGTCCTCTGATGACGCGCCTAGCCCGGCGTCGGGGAAGCCGGCGAGCCA
GAAGGCCAAGGCAGGGTCCAAGAGCGCGTCCCACTGCGCCGGCGTCGGTGTCGCCAGTTA
CCTGGCGGTCGCCGTCTCAGGTGGCCTGATGATGCTCTTATGAGTGCGAGAGGCTAATGA
GAGAGGTCAGTGGCGGGGTTCATCCGTGCTGCCCCGCTGCTTAATTTTTACTACATGGAT
TGTTGCTGAGTTCATTCTTTGGACATAGTAGGCGTTGTGCTAGGATTTGCTAGGAGTATA
TGCTTCTGTGCTTGGTCCTTGTTGATACTACTTAATATACTGCTACTTTATTTGTGCATG
TATGCAGAGAGTATTTCAGTGCTCGTGGCTCTAGAGCTTTTTTCTTTTTCTTTTATTGAA
CAAGGCAGGGCACCAAAAGATGCCAAATTCATTCAGCTCAAAAGTATAGTACATCAGATG
TTACAAAGGCCTTGAAGGAGGAAATAAGAAAGGAAATCACAGCCAATGCCTATGAGGTGA
AGAAAGGATGCAAGAGGTAGGTTGATCAGATGATCAACCAGGTGAACTTCAGATTCAAAT
ATAACTTAGACAAGAGCAGCATTCAGGTACTGGGAGAGAATCATTAAGAGAAAGCACATG
ATAACGTTTTTTTTTAGAAAGGAGGCACACTGCCCGACTTTAACGAACCGAAGCCCTTAG
GCCCTGCTTGGATTCGGTGTAAATATATACACCCAGATTTATTCTATAGATGTATTGAAA
ACGATGGTTGTAGGTTCTGTATTTATTACGGAGGTATTTTAAAGCAAACCGACAATCCAA
ACGGGACCTTACGAGTTCACAACGGAGTTCAAAAGGAAAACAATAAAAGAAAAAGAAAAA
AAAAAGAAGAAACAAGTTCGATACAGACCCCTCGGGCCAAACGGACAAGTCTGATGATCA
TCAGACTCGAAGATCCTAATGAAAACGACGGAGTAGTGTAGCGGTACAGTGCCAAACGCC
ACATGTGCTCGAGGGACGGAGATCACGCGGCATGTCACCGTGTGCCTCCCATCCACCGCC
CAGCCTGCATCCAACCGATCACAACTTTTCAAGGCAAAAACAACATCCAGACACAGAACA
CAGACCAGGTCAGCGGTAAAATCTGGCGGGAAAGGCAGGGAAAAGGCGGGCTTTGGCGCC
GCGATTCGCCGGCGTCTCCTCGTCTCGCGGCCGGCCGCCGCCGCCGTCGCCGCCGCCCAC
CCCGCCGAGAGGCAAGGCCGCACAACGCCACGCCCGGCGGCCGCGGCAGGCCGATAC