Contig Data
morexGenes
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Map Locations of contig_2553017 (2345 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_2553017

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39318 2 1303 bp MLOC_39318.1 Available Available LOC_Os03g45960.1, FRAME:+3, EVALUE:3e-113, 13103.m04938 protein thaumatin, putative, expressed





CDS Structure of MLOC_39318






Contig Sequence (2345 bp)

>contig_2553017 2345 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCAATTCGTCCCTGGATATGGCATGCCCGTCAACTGCGAAGCATTACTTCT
AAAATCTTAGGATCTGCATGCCCAGTCTATCAAAGATGTTCAACTGAATAAGATTTATGA
ACATGCCATTATAGGAGTGACAATGTACATATATATATATGAGTGCGTGCGTATGTAATG
TGTTTCTCAAGAGAAGAAAAGTCCATCCATCAACTTTGAGTCGCGGAATTCCATGGAACG
GGAAAGAATTCCACACACACAAAGAATAACCCACTTGTGAACAAGCTATGTCTCCATCGG
ATCAAGCTGTGCTTCGCCCAAATTCACCAAGCACGCGCAGCTTTTTTTGTCGTATGGCCT
AACCGCTTGCTCGTGAGCTGCCAAGCAACCACATCGAGAAGCTGCAAAAAGTTGAATTCA
ACTCTTCTCGACCCTATAAATATCGACCCAAACGAATGCCATTCTTCCTCACCACAGGAA
CACTTAAGCTCTACTACGTACAGGGGAGAGGAGAGAACACGATGGCATCCCTCCCCACTT
CTTCCGTCCTGCTCCCAATCCTCCTCCTCGTCTTGGTCGCCGCTACAGCGGACGCGGCGA
CCTTCACGGTGATCAACAAGTGCCAGTACACGGTGTGGGCGGCGGCGGTGCCGGCCGGCG
GGGGCCAGAAGCTGGACGCGGGGCAGACGTGGAGCATCAACGTGCCGGCCGGCACGACGA
GCGGGCGCGTGTGGGCGCGCACGGGGTGCAGCTTCGACGGCGCCGGCAACGGGCGGTGCC
AGACGGGTGACTGCGGCGGGAAGCTGCGGTGCACGCAGTACGGGCAGGCGCCCAACACGC
TGGCGGAGTTCGGGCTCAACAAGTACATGGGGCAGGACTTCTTCGACATCTCCCTGATCG
ACGGGTACAACGTGCCCATGTCGTTCGTCCCGGCCCCCGGCTCCCCCGGGTGCCCCAAGG
GCGGGCCGCGGTGCCCGAAGGTGATCACGCCGGCGTGCCCCAACGAGCTGCGGGCGGCGG
GAGGGTGCAACAACGCGTGCACGGTGTTCAAGGAGGACAGGTACTGCTGCACGGGGTCGG
CGGCCAACAGCTGCGGGCCGACCGACTACTCGAGGTTCTTCAAGGGGCAGTGCTCGGACG
CGTACAGTTACCCCAAGGACGACGCCACCAGCATCTTCACTTGCCCCGGCGGCACAAACT
ACCAGGTCATCTTCTGCCCATGAGCGGCCATGCATGGAAGAGGTCTCGAGCACACGGACA
AGAATAAGTCTATGCCTATCCGATGTTATATATCAAAATAAGTGCGTTTGGATGCATACA
TTCGTATGCACATGTAAGCCGGAAATGGATATACTCGATCGACGTGAGCAATAAACTCGT
GCATGAATAAAATGCTCTTGCGTAATAACCACATGCGTGCATGTGCATGTTCTTGTACAG
TACTGTATCAAAATACAAGACGGTTTTGTAGGTTAAATAGCTTTAAAAACATCTTACATT
TTGATATGAAGGTAGATATCTACTAGGTGATCACATTGCCCAATTGTAGATAGCTACGCG
GCCGAAAAACACGTATTGGAACGATCTCCACCCAATACTCAATGCCATTCAATTGGCGTA
GAAAAAATGGCCACACGAGCCAGAAGGCACCGCTAGTTTAGGAGCTGTCCTTGTTTGACC
AAATAAGAGTATCCACGGGCAAGTACTTCCACACACGCGATTGAGTTTCAACATGTTCTT
TTGTTTTGTTTCGAGCTCTACACGCTTCCTACATGTCACATACCTTGGAATTTTGCTTTA
CCTCACTCTCACTCGCACTAGAGGACGGACGGGGACCAGATTATCGCGAGCAAAGATGGA
AAACCCACGCATGCGTTTTAGGAACTACCCGGTACCTGGACATGTTTGTTTTTTCTAGGC
TACTACCCGGGCATGTGTTTTTTAGGGATAAAAACGATCCTCAATCAAATAAGTTCACTG
GAGTCGTTGCAATATCATGTGGTTAAGTAAACCAAACATTGGAAAATTTAGCTAAACCAT
CCGCTTCATGGCGTCTGCTTCTACTCTCACGGATGAAAATGCAACTCTCCAACTCCTATG
ATCTTTCGTTGATTCATTTCTCTAATGATAGCAGCACAACGTGCTCCCTCTCCTGCCTTC
ACCTCCTTGAAGGCCGTGGAACAGTCTGAGGACACCAATACTTGTCGGATTTGAAGATCC
AAAGCAAGTGCTAGCGCCTCTCTACATGCGAGTATCTCCAACATAGGCATATCCAGAATT
CCAGGAAACGTAATCGACGACGATCCCATATAAATTCGTTGATCATCTTTTTTTTTTTTT
TTTTT