Contig Data
morexGenes
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Map Locations of contig_2552388 (4788 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2552388

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39146 1 511 bp None Available Available None
MLOC_39145 6 1475 bp AK372010 Available Available None





CDS Structure of MLOC_39146






CDS Structure of MLOC_39145






Contig Sequence (4788 bp)

>contig_2552388 4788 assembly3_WGSMorex_rbca.fasta
TTAGCACCCCTCGCGTCCTCCCTGTCCCCGAAGCCGTTCCCCCCCCCCGCCCGCCGCCGG
CACCTCGACTCCCGCCTCCGTGGCCCCCGCCGGCTCGCCGCCGACGCTGCCACCCGCCGC
ATCCCCTTCTTCCTCCTTACCGGTACGCCTTTCGCCTTGATCCCCTTCTGGTGGCCGACT
TTATAGGCTCCGCTTTTCGAAAAAGGGAATCGATTTCCCGGTACGAGAAATGTACTGTAA
CCGTTTAATAACGTTTCGCTGACAGGTGGGCCCACTGAGATACCAGCGCTGGTGTGGCGG
CTCGGGGCGTCGGCGCTGGTCGCCGACTTCTCACCGCTCCGGCCGGTTCGCGAGGCGCTG
GACGCAGTGGTCGGCACGCTGGGGCGGGATGCTGCCAGTGTGGCTGTTCACCAGGTAGAA
TTCGAATCGGAATCACAAGGGAAGTTGCAGTCGTTTTCAGCGGAATTCGACTGAGAGACA
TGCGGGCTTTGTGGCATTGGCACACAGGTAGACGCGCACAACGTGGTGCCGGTATGGGCG
GCATCGGGGAAGCTGGAGTACTCTGCCAAGACCTTCAGAAGCAAGATGAACAAGGTCTTG
GACGAGTACCTGGTCGAGTTCCCCGAGTTAGCACAGGTGGTGCCATGGGACAGGGAGCAG
CCAAAGGACATTGATTGGGATATGCTGATTGACACGGTTTGCAGGTCCGGATGCGTTGCG
ACAAATTTACTGCATATGTGATTTGGACTGAAGAAATTTGTTATGAGTGGTGTTTGATTC
TTTGCTGATGTTGCAGCCAGGCAGAGGACGTGCCTGAGATTGACTGGTGTGAGCCGGGCG
AGGCGGCGGCAATGGAGGCACTTCTGGGTACCAAGGATGGGTTCCTAACGAAAAGGATTA
AGAGCTATGATTCGGACCGGAATTATCCCACAAAGCCAACGGCATTGTCTGGCCTCTCTC
CCTACCTGCATTTTGGGCATATTTCAGCACAAAGATGTGCTCTCGAGGCAAAAAAGCGTC
GCCATCTTAGTCCCAAGGTGCCATTGTTTTCTTTGTCAAGCTTTTGGTTTGAGACCCATG
CAATAAAATAATATATCATTAGATGTCAGAATATATTTCTTCTTAATAGTACCAAACTGC
AAATCTGAAATATCAATTGTTTGGGAACAGTCAGTGGATGCTTTCTTGGAGGAGCTGATA
ATAAGGAGGGAGCTAGCCGACAATTTCTGCTACTATCAGCCTCACTATGATTCGGTAGCA
GGTGCTTGGGAGTGGGCGAGGAAGACACTGAAGGATCATGCTGCCGACAAAAGAGAACAC
ATTTACACGTAAGATACTATTTGGGCTATATATGTATATCTGCTTGTCAGCAGTGAGGCA
AAAGGCTCCTTAACTAGAATTTACCTTGGCTTGCAGGAGGGAGCAGCTTGAGAATGCAAA
AACAGCTGATCCTGTATGTTTTAAAAAACACGTTCTACTACTGGAGATAACTCTCATTTA
CTAATCGAGTTATGTGTTCTCTTCCTTGATTCTTCATCAGCTCTGGAATGCATCACAGTT
GGAGATGGTCCACCATGGAAAAATGCATGGATTCATGCGGTAAAATAAATTATGCCTAGT
TGCCTACTTTAGATATCATATTTTTAATGCATTTTATTTGATATTTCATTATTTTGATGT
CATTTGGGCTGGTATGAATTGCGTGAGATTATTCTTGTTGCTAAAAATATGAAAAACTAA
ACTAATTATGCCCTATAAATACTCACTCCCTTCCTAAATATAAGTCNNNNNNNNNATTCC
ACTATGAACTACATACGGATGTATGTAGACATACTTTAGAGTGTGGATTCATTCATTTTG
CTCCGTATGTAGTCCGTAGTGAAATCTCTAAAAAAAAACTTATATTTAGGAACGTAGGAA
GTATAATCCAGGAACGGTGGCAAATCTGTGCGATTTAGCCCATGAAGATCTTGCAGGTCC
AAGTAGGTGGCAAATCTGAGCGATTTAGAAAAAGAACATTTGAGCACCTATGCTCCACTT
TCATCTTGGGGTCACAAGCCGTGTAGTTTACTTCTGCAGTTAAGTTCATTGTAAAGCATA
CTGCTCTGCCCTGATATGGTGGTTTTCTGCAGAATGTATTGGGCCAAAAAAATTCTAGAA
TGGACCAGTGGACCTGAAGAAGCACTTTCAATAGCAATATATTTGAATGACAAGGTAATT
TTGAGATGTTTGGCAACATTGTAGAGTTTATTATTTTACATTTCTCGGTGCTGGCAAATA
GCTTCAATTCATAAAACACATGAAGCACATCATACAGTCATAATGAGTGAGAAACTAAAC
TTGCCAAATTTTAGTGTAAGATCCTATGCATTTACAGATCTCCTGAAAACACCGAACCAT
CAGTTGCAAGAGCCTACATTTGATTAAATTTGTTTATAGTACTAATTATGGGACAACAGA
AATCGTGTTGATATGTGGCATAACAAGTGAAGTTGACGCCGGGTTGAAATCAGCTGATCA
CTGCAAACTCTGGCGAAACAAGTCCAGCAGCCATGGGTATCACCTGGACAATCCAAAGGG
ATCACATAGCAATTAGAAGCATCACAGCCCGATCCAACGCACTTTAGTTACCAACTAGTG
TGCACGCAGATATTGTCTCCCTCCAGTCATGGCAATTTTCTGCTTTTCTAGACTCTGAAA
AATAACCTGCCCCCTTGTATGACCAGCTAGGCCTTTATTTATAGTGCATCCAGGCACAAT
GCTATACTGTCTAGGACTCTGTTTCCATGCCCAACAGGAGCATCAGACTAGGACTAATAT
TTTTAGAACAGACATGAGGACAAAACTGCTTCAGCTACCATTTTGGTAATGTAGTGCACA
ACTAGATTACCAACTAATACTCGTATTTTACGAAAACCTATGAACCGACTAACTCAACGG
CCAGCCTTAAAGAAACTTCCCTGATTCCATGCCCATCACGAGCATCGGGAGAGGCTTCAG
CTACCATTTTGAGCAAAGGGTTGAAGTTTTGAAACGGTGTGTGCTATTTTCAGAAGGTTT
TCTTGCCTGACTTTGTTCAGCTTAGAATTGTACTTTGTCTAATTTGTTCGATGGCATTTA
GCTTGTCAATACCACCAAAGATGTTGTCATGAGTTTATGACCTACAAGTATTTCTGTCGC
CTATGCTGGAGAGAAGAACATCGTTTAATGTTCTTTGTGAATGGTGATTGTTCTGAAGAT
GTTTTTGTAACTCTTCAGTAATTTCCTTTTAGTCACAAGTGGCAAATAGATGTCCAAGTT
ACGTCTAATAATCAAGAGAAATTTTGCTTGGTTGGTTCTTTTACAACAAGTTAGATGTAA
GATGTCCATTACAAGGGGAAAAAGATCCCCAGGTGATAGCTTGAAACTATATCGTAACCA
CCATTTTATGTTTCCTAGTTCATGTTATTGGCTGTTCACTTTTAAGTACTTGGAATGATT
GGTAAGTCTTTTTAGAAAGCTAAAAAGTTCTGCTTCTCATTGCATTGCTACAAATAAAAT
GGTTACAAAGCTAAGACTAGGCATAGCAACTGAACACAACCACGGAGGACGACAACTAAC
AACCGTTAGACAGTCGTTAGTTGTTACAACAGACAAACCATCAACAAACCATCAACCGGC
ACCGGCCGTAATCTGTTGCAGTATGTGTTTGAACTAAATCTTTGGAATTAATCTGTTGCA
GTATCACATAGACGGCAGGGACCCCAATGGCTATGTTGGTTGCATGTGGTCTATATGTGG
CCTCCATGATCAGGTTTGTAAGATCCTTTTTTGCATTTGAACCCTTGAAATCCTATTTGG
AAGCGCATTTATTAATCACAGTTTGGAGGCTTGCGAGCAGTTTTTACAACCATACTATTT
TCTTAGGGTTGGAAGGAGCGTCCGGTATTTGGAAAGATACGTTACATGAATTATGCTGGT
TGCAAGAGAAAATTAGACGTTGATGCCTACATTTCTTACGTCAAAAGATTGGTTGCTCAA
CGCAAGAAAAGGAAATTGGAGGAATCTCTGAATTCAGCAGCCAAGTACTCAAAGTCTGAG
GACTAGTCCAACTACTAACTGTACTTCCGCATTGATTTTGATTCTGGTCTATAGTGGTAA
TTGGCAGTTAATGACTAACTTAAATATTGTAATTAATTGTTTGTTCATTTTAACTTGTGG
GTCACATAGGCATTTGATCACCTAACACTCCAACAATAAGAATGTAGAGGCATGCTCTTT
CGCTCCATGATGCACTTTTGAGAAACCTTCGATGTATCTTCGTACCCACGTTGTCGCATC
CTCTTACCATGCTTCTCCATGAGAAACTAGACCATCGCCCCCTCTTGCTCCCTCAATGAT
GATAGCATCTCAGAACTCTGAGGTGCAATGACATGTGACAGCCCGAGACCGACNNNNNNN
AAGATTCCCCCTTTATTCCGTTGCCGCCGTGCGGTTGGATTGTCTATCACATTCATCATC
GCATCATCCGCATTGTATTGGTGTTCTGTTGCCACCAGTTTTCAAAACTTGCATCCGTTA
GTAGCCTTCGGTTCTCTTCGTTTTCGTCGTTGACCGTTTTGAGACCAACCACGCACACAC
GTGTCTGTGGTGTCGTTTAAATCTTGTTTTTAGAAGTGTGTTTAAAATATTCTCGGANNN
NNNNNNNNCTTAGCGTGCGGTCTTATTTTAACGTAGGTACGCCGCCTGCCAAATTTCATC
GCAATCGGAGTCCGTTTGATAGCCGAACGGTCGACTGTAGCGGCACCG