Map Locations of contig_2552186 (3541 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2552186

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39069 2 1661 bp MLOC_39069.2 Available Available None
MLOC_39068 1 475 bp AK375921 Not available Available None





CDS Structure of MLOC_39069






CDS Structure of MLOC_39068






Contig Sequence (3541 bp)

>contig_2552186 3541 assembly3_WGSMorex_rbca.fasta
CGTCCCCGCTCGCCGCCCGAAGCCGGGGCCGCCTCCTCCGCGCGCGCTCCGGCCACGCCG
CCGCCGTGGTAAGCCGCCCCCACCCCGCTGCTCGCGCAACAGGTTCGCCGGTCTGCTAGT
TCCTGCGATGGTGCCAATAGCCAACTGCCACTCGGAGCTCGCCTTCGTTGCGGATTGCTT
TCCTTTTTTTTTTTTGGAGCTTTGCCAGCGCACTGTTTGCGCCAATGGTTGTTCGTTCGT
AGATGCGGCCGTGCGCTCTTTCCTTTTTTTGTGCTGGCTGATGCGTGCTTCGTCAAACGG
ATGCAGCTTGATTGTTAGCGTGTAGTAATAATAGTCAGCTTGGTAGAACGAATTTGCTCG
TGGCGGTGTGCTTGAGCGAGGTTCATCTTTGTACATGCAGAGGTGCCAGAGGGTCGATCC
TGTGAGGCTGAGGGCGGTGAATGGATCGCCCCCCTGCGTTCCCCTGTCCGACAGGTCGCC
GTGGATCCCTGTGACGACGCCGATTTTCGGGGACGCAAGCATCAGGAAGGACGACACGAG
GCTGCGCATCTTCTCAGGAACCGCCAACCCCTCGCTCGCCCAGGTCGGTCCAATCATCCT
TGGAGAAATTCACCTTTCATACTTCTGCAGTTCCACATACTGTTATTGTATCCCCGTCCT
GGTTCTAAGAGCACACTCCTTTTTTTGCAAGGGAAATGGTAGGTAAGTTGGTTTAGTTTA
GACAAAAGAATTATGCAAATGTGAACTAAGCTTAAAAGGACATGAACTGTGGAAATTGGA
AAGCTGTTCTTGAAATGGAATACATCAAGTGGCAAGCCACTTGTTGTAAATCCTTCCATG
TCAAACTGAATGATTTGTCACTCAATGTCACTCTAAGCTGTATTTTTCCTTCTTCTTGGA
TCCTTCTTGTGACAGGAAATAGCAAGCTACATGGGTCTAGAACTTGGGAAGATCAACATA
AAAAGGTTTGCTGATGGAGAAATATATGTTCAGTTACAAGAAAGTGTAAGGGGCTGCGAT
GTGTTCCTTGTGCAACCATCATGTCCTCCAGCAAACGAGAATCTCATGGAGCTACTCATC
ATGATTGATGCGTGTAGAAGAGCATCTGCTAAGAATATTACTGCAGTCATCCCTTATTTC
GGTTATGCCAGGGCTGACAGGAAGGTACTATTTTCTAAATATTGGTTTCTCGTTTTAATT
ACAAAACAAAAGCCTACACCATAGACTTGTCAGTTGTCACGGCTTGCACACCTGTCCTTT
TACTATTACTGTGTAACCAAACTTTCTGTGGTAAAATAAAATCACCCCCATATGTAAATG
TTTTTAAACACTAGTTGAATGCCCGTGCATTGCCACGGAGAAAAAAAAGGAAGGCAGCAT
CATTCATGGTGAGACGAGACACTAACCAAATGGATTTGAAAATGACACTTCGGTTTTATT
GGCGGAAACATTTCAGTTTTGCCAATTTTAGTGTAACAAGAATGCTCATGTAATAAAATT
GAGATGAAAGGACTTATGCATTTCTAGAAGAAACATGAACAATTGCAGACATGTGCATAT
TGGGCCATATATGAAAGATAGAAGTAAAAGTACGAATAAAAGAGCTTTGACTGTGGCATT
ACAACAGCGACGATGCACAATCATGACAATTTTCAAAACCATTATCATTCAAATATCTTC
TTTCGTTATTTGCCGGAATTTATTTACTTTTCTACTTTTTTAAGGTCCTAGTCTCAGCTT
CTCCAAACAATAACTTGAATCAATATGTCCTTTGCTGAACAAACAAAGAAAAGGAAAAAA
AAAGAGCCTTACCAGATGTGATGCACAATATAGAGTGGCACACAATCAAGTCCGTATTAC
CAATTAATGATTGCACATGAATATTTTTATGCTTATTTACAATCAATCATCTCATGATGC
ATAAGGAACTCAACACGAGAAGCGCACCATCACAAAGTTACTTAACAAATAGCGTAATCT
TGTTATTAAGCCTAGATGTACAATAATGGGGCAGAAGTAACACGGTATCTCCCCTTGCCA
CAAAGCAGAGTATCTTCCATCTAAAAAAACAGAGTACCTCCCTTGCTATAAAATCTACTC
TACCACTGTAAAAAGGCAGAGTATCTTCCTTTGCTACAAACCAGCTCGTACCCAAGCACA
GGAAATCAGACAAAATTTTGGCATTTGCTTTGCCTTCTTATCGCGCTTGATTTGTCATGT
CCAGCAAGCACTGTTTAATAACAAAATAATCAATGAGCATGTTATACACTCTAAAGCATA
TGCATACATATACTGGTATACAAAGATTATGGATATAGTCCAATATAATGCCATGTTGCT
GCAATTCTTGGCTAATCTGATTGAGGAGGTGACGGAGATAGTTTTGACCATTATGAAAGA
CTGCAACAACAAGCCACCACCACCACCAAAAGACTAGCTGTCATAGTATCTTTCGTGATT
TTATAATATGAGATAATAGGCTGCAAAGTGTTTTATCGCTACTTTAGAGCATTTATCTAT
GTATTCGTTGGTGTCTGGTTATACGATGAAGAGTTGGGATGAGACTTTTCGCATTTTTGT
TATTATATTATAGATGCTGATTTGTGTGAGGTCATGACTACCATAATAAACATGCAAATG
ATCGCCTCAACTTCCAATGGCAAACACTAACAAACTAAACAACCCGATGCTTGGTATGGT
GCATTGGTATTGGGTCGAGTCCAGAGCCTTGCAAGTCTACCAATGCATGGATATTTATGA
AAAATAATTGATGGAACAAATGTCGTGGAATTGGGGGCGGACGACATCGGGGCCGTACTT
GCCAATGTTGGTGGGATGGGGTAGGGGAGGAGGGGAGGAGGGGAGGTGGTGGGCAGAGGG
ATTGCTGCTGCAGAGGAGGCAAAAGAGGCATTGCGGACTTGGGGGGCGGACGATGCTGAC
GGCTTACTGGCCGACGTCGGCATCAAACGAGACAGGCTAGGGGGAGAGGACACAACAGGG
AGGAGGGGGAGGTAGTGAGTGGTGGACTGCTACTATAGAGAGGAGTCGGGAGAGGTGTTC
GGAGCAGCCGACACCGGCAGCGGGTGAGTGTCAGTGGCCACCTGCCTAGTTCGGTTCCAT
TATTTGCTCCCCTTTTCTAGAAGGATTGAATGCCTCTTGTTGGATGAGGTGGGGATAGAT
GGAGCAGGACGTAGAAAATAAGGGTCTATTTGCAAATGTGAAGTGGGGTTGTCTTCCACG
TGTCGGACGCAGATCTGACGATCGAAAATGATGGATGGCAGGCATACCATCATTACCAAC
TCGTTATTTTTATAGGAGTAGAGATTCATAAATGTGGAGAATGGAAAGTCAATGCTGAAT
AGCATATTCTATTACCATGAGGAGCATGTTGTTCTGGCAGGATAATGCATGATCAGAAAC
TCAGTCTTAATATAGAGTTCTGGCACGCCGTCCTAATATTTATAAAAAAAATAAATCGCC
ATATCTTTTTTTCGAGAAAGCGCAAAGGACCTTTGCGTTTCATTATATTGAAAAGATAGA
G