Contig Data
morexGenes
Links



Map Locations of contig_2552177 (3140 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2552177

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39065 1 1830 bp MLOC_39065.1 Available Available LOC_Os05g07050.1, FRAME:+2, EVALUE:0.0, 13105.m00763 protein pre-mRNA-processing-splicing factor 8, putative, expressed





CDS Structure of MLOC_39065






Contig Sequence (3140 bp)

>contig_2552177 3140 assembly3_WGSMorex_rbca.fasta
GGTTTGTTCCTTTTCTTTTGCTTTTACCTCTAGTTTTGTTGCAATTATTGCATAACTGCG
CAGCATCACAACTTTTGGAAGACTTAAATGAAAATGGATTATAATATGCAGGTCATCCAC
ACAAGTGTATGGGCAGGACAAAAGCGTCTAGGGCAGCTGGCCAAGTGGAAAACTGCCGAG
GAGGTTGCTGCATTAGTTCGGTCTCTTCCTGTAGAAGAGCAGCCAAAGCAAATTATTGTG
ACAAGGAAGGGTATGTTGGATCCATTGGAAGTCCATCTGCTTGATTTCCCTAACATTGTT
ATCAAGGGTAGTGAGTTGCAGCTGCCATTCCAAGCTTGCTTGAAGATTGAGAAGTTTGGT
GATCTTATTCTCAAGGCTACGGAACCACAGATGGTTCTTTATAACATATACGATGACTGG
CTGAAAAGTATCTCGTCCTACACCGCATTCTCTCGTCTTGTACTTATATTACGAGCATTA
CATGTCAATAATGAGAAGGCTAAGATGTTGCTGAAGCCTGACAAGACAATTGTTACGGAA
CCACATCATATCTGGCCATCTTTGACTGACGAGCAGTGGCTGAAGGTCGAATGCGCGCTC
AGGGATCTCATTCTTTCTGATTATGCGAAGAAAAACAACGTTAATACTTCTGCACTTACG
CAATCTGAGATTCGTGATATAATACTGGGTGCTGAAATAGCTCCACCGTCACAGCAGAGG
CAACAGATAGCTGAGATTGAGAAACAGGTAAAACTTTCTATACCAGCCTTTGTGTAGTTT
CTATGCATAGTAATTGCATCAGTTTTCCTCATTCTTGGATTTGCTTGAATTTGCAGTCCC
GAGAGACAAATCAGGTAACTGCACAGACAACAAGGACAGTTAATGTGCATGGAGATGAGC
TCATTGTCACAACAACCAGTCCGTATGAGCAAGCAGCATTTGCATCGAAGACAGATTGGC
GTGTCAGGGCCATCTCTGCTACGAACCTGTATCTCCGTGTCAACCACATTTATGTTAACT
CAGATGATATAAAGGTCAGTACTGCAATTCCTTTTCTTCGATTTACCCATAAAACCACCT
AATAACAATTGCCCAATGGTTACTTACTGCTTGTATTATGTGTACAGGAGACTGGCTATA
CTTACATCATGCCAAAGAATATATTGAAGAAGTTCATATGCATAGCAGATCTACGGACAC
AGGTTGCAGGTTTCCTGTATGGGCTGAGTCCACAGGATAATCCCCAAGTCAAGGAGATCA
GATGCATATCCATTCCGCCACAGCATGGAACTCACCAGATGGTCACTTTGCCAGCGAATC
TCCCAGAGCATGAGTTCCTTGCTGACCTGGAGCCGTTGGGATGGATGCATACCCAGCCGA
ATGAAGCTCCTCAGCTATCACCTCAGGTTTGTATCTTCAAACCCAACCTTATGATCCTTA
TCCAAAATTTAAACTAAGTAGCTGAATTTCAGCGCACAATTCTATAATGTCTGATCAAGC
AGATTTATGTCTTCTCCATGAGCGGCTAATTGTCTCCCTTGGGACATTTGAATTCTGAAT
GTGAATATTAAAATGCATGTTTTACACAATTTAATCTTTCCAACTCACAATGCACTATAC
ATGAAATTTGTTGCTGTTGATTCTTTTGATTCTTGCACCTTTTGTAATAGCGTTCTTTTT
GCCTGTGACAGTTTCAGTGCTGAATTGTTGGTTCTTTTGTTTTTGTCTCATTCTGTAGTA
TAGTCCTTTTTTGCCTGTGAGCCAGTGTCTCGCTACTGAACTTCTGTTGTTTCTTGCACA
TTTCAATTGCTATGCAAGTCTCATATACTGAACTGTTTGTTCTGCTGTGCTTTGCAGGAT
TTGACATCACATGCTAAAATTTTGGAGAACAACAAACAGTGGGATGGTGAGAAGTGCATC
ATTTTGACCTGCAGCTTCACCCCAGGATCGTGCTCGTTGACTGCATACAAATTGACACCA
AGTGGTTATGAGTGGGCCCGTGGCAACAAGGACAACGGGAGCAACCCACAAGGTTATCTT
CCAACTCACTACGAGAAGGTCCAGATGCTTCTCAGCGACCGCTTCCTTGGATTCTACATG
GTATGTGTACTCATCTTAATAGGATTGATATTTGTAAAAATTGTTCTTCAGAGCCAACTC
AAATTCGGAATGCTCACTTTCACTTTTGTGTCTCCCACCAGGTTCCGGACAACGCTCCGT
GGAACTACAACTTCATGGGAGTCAAGCACGACCCGCTGATGAAGTACAGCATGAAGCTGG
GCACACCCCGCGACTTCTACCACGAGGACCACAGGCCAACACACTTCCTGGAGTTCAGCA
ACATTGAGGAGGGCGAGGTTGCTGAGGGGGACAGGGAGGACACCTTCTCGTAGTCGTAGC
CACCTTAGCACGCCCACTCCGCCCTATGTTAGCGTATCGAAACCTGCAATGAGCTCTGCT
CAGTTTTGAATAGAGAGCTCTGTGACGTGTGTAACTTTGACGTGACATGTTGTATGATGT
TTTCCGTCTCTTGAGACTAATACCTTGTGTTGTAAGCCTGCCCTTCAAGCACGGTGCTGT
ACAAGTGCATCATGATAACAGTTGAAACATTTTGCTTGGTGGCCTGTAGATGCCATCATG
TAACTTTGTCCCCAGTTTTTTCCTTGGCCTTGACCAATTTCATGCTCTTGTGCACATAGG
GGTGAACTGACCTCTGCCGCTGCCATGTTGCTCCCTAGTCGATGACCGACGACCCCCCTT
TTGACAGTCGGTAAGTGCGGTATGGTTTTTGCGGTGGAGCGACAGCCGATGACTGCTAGT
GTAGATTTGTTGATGCCCTCCTTGCTGCCGCCGTTTTTGGGGTTTTTTCACTGTTTTGAT
CCGAGGGGGTAAGTTAATCACGGAACGAACTCGTTTGGAAACAATTTCACGTTTTGACCC
TTTTTCTTGAAACGCCATAGACTCTGGTGTTGCAGCCCTATGGAGAAACACCACTCTACT
GTGATGTTGCAGCCCTTCTGTGAAACACCTGTGTACTGTGGCGTTTCTGGCCTGAGGTGA
AACGCCAGGTACCATGGCGTTTCTTGGCTTTATATTCTGCCACCCCGACCCCCTCGCCGA
CCAACCACCATTTCTCCTCT