| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_2552097
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_39040 |
1 |
455 bp |
AK360697 |
Not available |
Available |
None |
CDS Structure of MLOC_39040
Contig Sequence (6684 bp)
>contig_2552097 6684 assembly3_WGSMorex_rbca.fasta
AAGTTATGACGATGTATATATAAGTAGAAAAAAGAAGAAGAAAATGTTGCTCTACTGCTC
TATGGTGTGGGTTTGTGGCGAGAAAAAATGATTTGGGGAAAGCAATATGGGGGAGATTCG
CGCGTACGATCGTCCGACACGTCGACACGGGGCGGGCCCGCGGTGGGGCATCGTGTGGCT
GCAGGACCGCGGGGCCCCGCGGCGCGGGCCGGGCCAATGGGTGCTCGACAGCGGACATGC
CCCAGACCAGCCCGGTATTGCATACCGCGCTCGGGGCCAGATCCCTTTAAAACCCCCTCC
CATCGCCCTGCCGGAACCCTCATTTGGCTATCCCCTCTCCCCTCCCACTTCACCCAACCA
CCTGACAGCCATGGCTCCGCCACCTCGCCTCCGCCCGCGCCTCTGGGAGTAGCCGTCGCG
GTCGCTCGCTCGCTCGCTCGCTGCTGCCGGTGTTGGCCCGGTCCTCGAGCGGAGATGGGG
CGCGGGAAGGTGCAGCTGAAGCGGATCGAGAACAAGATCAACCGCCAGGTCACCTTCTCC
AAGCGCCGCTCGGGGCTGCTCAAGAAGGCGCACGAGATCTCCGTGCTCTGCGACGCCGAG
GTCGGCCTCATCATCTTCTCCACCAAGGGAAAGCTCTACGAGTTCTCCACCGAGTCATGG
TAAATTATGTACGCGCTGTCTTAAATTTCTCCCCCCCAATCCGCCCTGGGCTTCGATTTC
CTCCGCGCCGTTCCGGTCCGGCGAGGCGACCCGGCCGGCCCCAGGGCCTTCTCCATTTCC
GCGCTGCTGCTGCTTGGTTCATCCGGTTTGCTCGCTCGCTGTTTCCTTCGGATTCTGCCG
TCGCTGCTTGCTCGTTTTTTCTTAGAATCGATGGCGGAGCTGGCGCTCCCCGCGGCCGCG
ATTTCTTGCTATGGGGGTAGGGCGTGCGACGGGTCGCGCCGCTATTTTATGCTCCGCCAT
CGCCGGGAAGGTTGTTCATCTCGCGTATTTTGGGGAAATTTTGGTCCTGGACGCGCCAGG
TGGCACCCCAAGTGGAAGGGTTAGGACGGTAATCTTTTGATATTTTCACGGACCGGGGAT
ACTTATGTAACAAATTTATTTTGGATTAAAAGTGACATTTGCGTCCGCAATTTAGCACGC
TACCTCATCTTCTCATTTCGAATCTTACTAGGCGCTAGAATACTTCGTTGCCCGCCTCAT
CAAATCCGTGCTTGCTGCTTGAACAAATGAACCTTGTCATCTCGTTTCTTTCCAGAATTT
TGTGCTACAGGCTTTACTATCATCCGTATTGCTAGCTCCGGCCTCCGGCCATGCGGCCAT
TTTGTTGTTTGCTCGGAGATGCTGCCTATGATACTTGACTAGCTCATGCATAGAATAATT
GGCTCCAGCTGATGAAACTCCGAAATGAAGAGTCAAACCAAAAAGTAGAGAGTTCCTTCC
AAATAAATACTATAACCCAGTCGCCAACATCAAAAGAAAGGGCCTGATGTTTATCATCAT
CGTAGTGCTTACTGCTATGCAGCCTAAAGGAGACACTCACGGATGTCTTGGAAAAACTGA
TTGCGGTCGATGATCTGGCGTTCCACCGCTTGATTGCGAATTTTGCCCGGCGTATAGTCT
CGGAGTGAGGGGGGATCCTGTCCATAAACCACCCTGAAAGGACTGTCCTTCAATGCTGAG
TGATACGAAGTGTTGTAGCAGTACTCCGCCCAAGGCAACCATTGTAGCCACTGGCGTGGA
CGATCCCCAGTGATGCAACGAAGGTACATAGTGGTGACGCGATTCACGGTCTCCGAAATC
CTAACGTGAAAACCACATCTCTGTTCGAAACGATGGAGCTTGCAAAACCATGAAGTCAGA
CAATGTTGGAGACGAAGGCCTTAGCAACAAACTAAGCAGTGTATGGATGCGCCAAGGGAA
TGAAATGTGCATACTTGGAGAAACGATCCACGACGGTTAGGATCACACTTTTGCCGCACA
CCTTTGGGAGGGCCTCAATGAAATCCATGGAGATGTCTTCCCGGACACGAGATGAAAATG
TCAAGGGCTATAACAAGCCGGTGGGATAAAACTGCTCCGTCTTATTGCGTTGATAAACCT
GGCAAGCACGAATATACTGCTGAAGTGCTGCCCTTGCTTGCGGTAGATGGAAATCCCGGC
GAAGATGATGAAGCGACTTCTGGATTCATGGCCCGTATCGTGGGCTACAGCTAGGACCTC
CCCGACCAGCGACGACGCGGGTGGCACATAAGCTCGTTGCTGGAAGGTAACAACACCATC
AACGAGAGCCCAAGGCTGGCCCAACTCACCAGATTCGAGCTGTTCCCAGAATGTGATGAG
CGTCACGTCAGTGTGTGTTGCCCGACGGAGAGCTTCAAATAGATCAAAGGAAGGCCCAGT
TATGGCAAGTGCCTAGGCAGCAGGAGCATCACGGCGAAAGAGCGTCGGCGACGATGTTTT
GGCGACCTGGTTTATATTCCATCGTGAAGTCGAACCCCAACAACTTGCCCACCCAATGAT
GCTGTGGAATGGTAGCGAGGCATTGGTCCAACAAAAACTTCAGGATGTAATGGTCAGTTT
TGATGACAAACGCACGTCCCCAACGATAGGGCCACCAGTGGTGCACGGCGTGCACCAGAC
CAATGAGCTCCCGCTCGTAAGCGGCGAGAGAAGCATGGCGTGGAGCGATGGTTTTGTTGA
AGTAGGCGATGAGGCCGCCACCTTGATGCAGGACCGCCCCGAGACCAGATCCAGAAGCAT
CAGACTCCACAATGAATGAAACTGAAAAATCTGGCAGCTGAAGCACATGGGCGGTGGTAA
GAGCTGTCTTGAGAGCTTCAAAGGCGGTAGTCGCTGCCGGCATCCAAAGAAATCCATCTT
TCTTGAGGAGGGCCGTGAGGGGAGCTGCAATGGTGCCAAAATGCTGGATGAACTTGCGGT
AGTAGCCTGCCAGGCCCAAGAAACTACGCACAACACGGACGTTGCACGGAACCGGCCAGT
CTACCACGACGAGAACCTTGTCGCTGCCCATGGCAACTCCTGCCGTGGAGATCCCATGTA
AGCCATGGTTTCCTCCCCAAAGGAACACTTGGAGCGCTTGAGAAACAACTGATGTGTGCG
CATAGCCTCCAAGATGAGCTTGTCATGACGAAGGTGCTCTGACTAGGAGGAGTTGTATAT
CAAGATATCATCAAACAACACAGGCACAAACCGACGAAGGTAGGACGAAGAATGTTGTTC
ATGAGTGCTTGGAACGTCGCTAGGGCATTGATCAAACCAAAGGCCAACACCACGAACTCA
AAGAGGCCCTCATGTGTGCGGAACGCCGTCTTGTGAATATCCTCAGGAACCATCCGGACC
TGGTGGTAACCAGACCGGAGATCCAGTTTGGTGAAAAAATGGGTGCCCTTTAGCTCATCC
AGAAGTTCATCAACAACGGGAATTGGAAACTTGTCTTTGATGGTGACCAGGTTGAGACCA
TGGTAGTCGATACAGAAACGCCAAGTCCCTCCGTGCTTTTTGACGAGAATGGGGGATGAA
AATGCTGAAGAACTAGGACGAATCAGACCACGAACCAGCATCTCTGCACACTGGTGCTCC
AGTTCTTCTTTCTGAATAGTTGGGTAACGGCAGGGTCCGACAGCAACCGGCGGTGTCCGT
GGAAGAAGATGAATATGATGGTCATGGGCGCGCTGAGGCGGCAGGCCCTGAGGGTCGGCG
AAAATGTCGGCGAACGTGGCTAGAAGGTTGTCAAGGAGGTCCTTGCCTTCGCACTCATGG
AGGTGTGCATGGTGTCCGAGGGAGCCAAGTCCTGACCACTCCACACGGTGATCCGAGTGC
CAAAACGACATCCACTGCGTAGTGAAATCCCAGAGAATTGGCCCAAGAGTTTTGAGGAAT
CGTGTGTCGAGGACGATGTCGAACCCGCCTAATGGTATGGCATGCAGATCAACAACGAAA
CACTCCTTGTCAATAGCGATCTTAGACTGCTAAAGGAGTCCCCAACAGGTCACCTTATCG
CCATTAGCGACCGTGACTCCCAGGCGCCGATTGGAGGAGAAAGGCAACCCGACGACGGTG
GCCAGCTCTTCGTGAATGAAGTTACGAGTGCTGCCCGAATCAAGCAAGGCGACCAGGTTA
CGGTCCCCGATGCAAAGAGTGACCTGCATTGTGTCGCTGGTGGGAATTCCGGTGACAACC
AAGAGCGAGATTTGTGCCTCCTGGAAATCCTCAAACTGCTCTTCGTCGGTGTCGGTGGAC
TGAATGTAGAACACCCGTAAGCATAGACCCTTAGCGCGCCGTTCATCCATCTCGGCCGGT
GAGTCTTTTGAAGACGAGCGCGAGCGTGGGGCTGGAGGAGTCCGGTAAGGCTGGAGTAGG
TGCGGCCATGGGACAGAGTGGACGGCTAGGCCGTGCCGCGGTGGTTGCAGCGTTGGTGAC
GGTATTGTGGTGTTCGAAAGAAATGGCCAGGTCCATAACCGCGTCCAAAGTTGTCGGTTT
CATTATCTCGACCCGAGTTTTCATGGGCTCGTCCAAGTTGTTCGTGAAGATATCCCGCTC
ATCGTCATCGGCAATGGGCGCACACGAGAGAGATTCTCGAGGAATTGTTTGGAGTATTCC
GCCACAGTGTCGGAGCAGCGAGTGGAGATCAGTTCACCAAAGGGGTTGGCGCTTGTCGAC
GGTCCGAAGTGGTTGGTGATCAGTTGTTGAAATTCTGTCCAGGACGGCCGCTGGCCCAGT
TTTGCCTAGAGGTGGCCATACCATAATGCGGCGATGTCGGTGAGGTGGTAGGATGCGAGC
CAGGTCTTATCGACCTCCCGCGTTCGTTGTTCAAGGAAGAACTGGTTGCAGTGCGGGCTC
GGGTCAGGATATTGAGCCCGACGATCGGGCTGGGCTCTGGTCTATGAAAAACCAAATTTA
AGCCGAAGTTAGGTTGGGCTTTGTCGGGCTTTTCCTGGCTTGGGCCCAATATTTAGGCCT
GACGGTCGGGCCGGGCAGAGCTCTGGCTTGGGTTTTCAGCATCGGGCTTTTTTCTGCCCA
GCCTAGCCTGACATATGCCCAGGTATGGGCAGAACCATAAATTGGTTTTGAGCAATGTTT
TTAAGGCATCGGTATACCGTCGATATAGCGAAGACATAACATTGTGGCGCGGTCACAGGC
CGTCCAGGCTGCCCATATTTTTGACCCGTGGCGGGAGAGAGATAAAGAGAGGCGTCCATG
GCTGGGAAAATTAGCCGCGTACCTCGTCCTCTCCCTGTCGCTGAGGACGGAGAGCCAAGG
AGTCCGTGGTGGATGAGGTGCGACGGAAGTGGGAGAGAGACAGAGAGAGGCGTCCATGGC
TTGGAAAATTAGCTGGGTACCTCGTCCTCTCCGTTGGTTGAGGACAGAGAGCCAAGGAGT
CCGTGGTGGATGAGGTGCGACGGGGAGAGGAAGGAGACGACTAGCACGACCCGGGGAGGT
GGGGGAGCACCGGCCAGCCATGGTTGAGGTGGTTGGTGTCGCCGGTCTGGAGGGAGGGTG
TGCCGGTCGGCTGGATCGAGGGAAGGAGGGAGCGGCTGGGTCTGGATCGTGAGGAGAGAG
AAATCGATAAATGAGGGAGAGAGAGATCGACAAGTTGTGGGGGTGGCAACGCGGTGCTAG
GTTAGGGACTTTCCTTGGCTCGATATGAGCCCAAAGGGCTGAAACATGGAAACATATACT
ACTAACGAAATAAGCATGATGCATCTTATACAATGGGGTATATACACAGTGCATTATATA
CATCTAAAAGTAGTCGTGTACAAATTATAGATTTAGATTATGTCTATGAAGTTGTGATTT
AATTGCTATCATTTTCCATAGGTTGTGTCTATGATGTCGCCACGTCATACGCCATAAGCG
TTATAATGTTATGAAGGGGGTCGGTTTCCATACAATGCGTTACACCATGGAAACATTGGT
TTTGAGATCTTTTCTGTTCCAGCTCTAGACAGACCCTCTATTCTTCCCAAGAAAACTTGA
ACAACACCAGAACCTTAATTTGAAGTTCAGTTTCATGTGCTCTTTCTAGCTTTGTTGCAT
GTTACCTATCATTACATTATGGTCACAGTGAAATGTTTTGCAAACTATTTGACCAGTGTA
TACCATATTTGAATCTCATTTGCATCTGCCGATATGAGACAGCGCATTCAAAAAAGCTTC
CGATTATCAAAATGGTTAATCTTGTTTACATGTACTTCCAATGACCAGATATTTCTTTCT
CTTATGCAGTATGGACAAAATTCTTGAACGGTATGAGCGCTACTCTTATGCAGAAAAGGT
TCTCGTTTCAAGTGAATCTGAAATTCAGGTAAAAGTGAAAAGCAAACGGTTTGCTTTCCT
TTAGCTATGAAGTAAATTGTTGCCGACATCAGATGTGCTGACATTTATTAGTAGGCCACT
ATATTTTGAATTATTTCAGTGAGCTATGAAGTTAGTTGAATTACAACTATAAATTGATTG
TCCATTTGATTCTCTTGTAACCTATTTTCAGTTTGTCTTTGATGAATGCTTAGGCATGGT
CGAATGATGTAACCTAATACCGCTCTCACCTAAGCCTAACATCTAAAGCCGGAGGCCCCG
ACCGAGCCACATACCGGGTCAGGGGCACAAACCGGTCTGACGCACTCACATGTGTCGTCG
CCATCATCTTTCACTGGTTCATCT
