| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_2552052
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_39022 |
1 |
1072 bp |
MLOC_39022.1 |
Available |
Available |
LOC_Os06g27890.2, FRAME:-1, EVALUE:9e-25, 13106.m02873 protein STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed |
| MLOC_39021 |
1 |
2517 bp |
MLOC_39021.1 |
Available |
Available |
LOC_Os08g29590.1, FRAME:+2, EVALUE:6e-31, 13108.m03058 protein zinc finger, C3HC4 type family protein, expressed |
CDS Structure of MLOC_39022
CDS Structure of MLOC_39021
Contig Sequence (4898 bp)
>contig_2552052 4898 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGTGAAGGCGCTCACCTTGGCCTTGCAAAACCGCAACATGAGATGTGATGT
CGAGCACGCGTGTCCTTTACTTACTTAGCAATCCAAATAATTAAAAAAAAAAGTTTTAAG
AAAAGTTATTAGTATTTGATATCTTATTAGGAAGGTGCTTTGTAGAATATTTCACCGCTT
TATGCACTACGACCTTCAAGTTTGGTCCCCTTCGCATGGTATCTCCAGCCCACACGGTTT
AAGTTCTCATACTTGCATTATTCGTGGATTTATTTCAGGATTTTCGGCGATACACTTTGA
GTAGAAGGAGACCTTCCCGACGACGACGAGGCGCCTACGGTGACTTCGTAAATCTTAAGA
TGACATGCCGACTTAGTCTTTCGGAGGTATTCATAGGGGCACGATGTGCATGCGTGCGTT
CATAAGAGTGAATGTATGCGCGTGTATATGAGTGCTTGCGTTAAAAAAAAAGTTTGGTCC
CCTTAGAGGCAAAAGAAAAAAAGTTTGGTCCCTAAAAAAAAAAGACCTTCAAGTTTGGTA
CTATCGCGTCCGCTTCCTTGCTGCTTCTCACGGAGAATCTCCCCCCTTCCAAGCCTTCCC
GTGAGAGGAAAGTTGCAAACGGATTTAGGTAGGGCTTCTTCTTCTTCGTGCTCCCTTTGC
GCTGACGATTTCTCGCTTCGTTTGTTCATCTCTTGGGGCTTCCTGATCTGGAAGTCGCGT
TCTCGTGGTGACTTTTTCTCGATCCTTTACATTTTTCTCGGTGTTTCTGTTGGGCTAGAT
GGTGGGAAATTTTGTTTTGGGTCTCGGCCTTTGCCCAAATTTGTGTTTGAGATGTTGCCA
TGCGTCTCGGGGAGACGCACTTTGGTGGGGAATTACTGGATTTTTTGGGGTTGATTTTCA
GGCACACTGTTTGGAATACAATTAATTTTCCACGATTTTTGTACTGAATTAGTGGTTCCA
TCGGCAGGTCAGGCAATTGTCATAGGCCGTTCCCATTCTGATTATATTTTTCTTTGTGGA
ATTTCAGACTCCGTATGCCAAAGCTACCTGTTTTTTGAGGTTGTATGCAAACGCTACCTA
GCTATTGAAACTATCCGCGGACATTATTGTCGTGGCTAAAAATCTGGACTAGAGGACATC
TGAGGCGGATGGAGAGGAGGGAGGAAGAGACGGTCATGAGTGATTCAGACCCTCTCCTCG
AGAGGAAGGATCAGTCAGGCTCATTGCCCCAGCTCTCGCCACCTCAGCCGGCAACCGTAA
CGGTGTTGGAGATTGAGGATGAGGAGACCGATGGTTCTTATGCCGCGTGCTGCCGCATTT
GCCTTGAGGCCGAGTCGGAGATAGGTGACAATCTTATGTATCGGAGATGCTATTTTGTTG
TGTTGAACTGTTGATTATCATCCTATGTATAGGGGATACAGTTTTTTGTGTGTCAATTTG
ATTGCTTTAGTTCAATTTGGTAATGATTTTGTCTATGTCTAGTTTGCTTCTTGTCTGACT
GCAGCAAGTAGAAGAAAGTGTTGGTTACATGTACACAGTTGTTTGGCATCTTTCAACTAA
TCCAAAATCTCTTTGTGATCTTTGCTCTGTAATGGAACCCAATAGGCAAAGCTTAGGTTA
TAGGATGTGTGCCAGCAGATCAGGGTAGCATTGAAATTGAATTGTAGTGCTAGCAGTTCG
TTTTTGTTTTGTTTTGTTTTGCAACACTTGCTTTAATTGAAGGTTTGTATCATAAATAGG
ACAAGAGAAGAAGGCCCATGTTCACATTGCGATGTCTGAAACCTAAAGCTAACACTAACT
AACCAGTTCAAGTTCTAGCAGGAATAAGTATAATTTTTGCACGGTTTTGTTTTAGTAGAC
CTAATAGGGTAATTTGTCTCAACTGTTTAGTCTTCAGGATGTACATTAGGCTAACAGGCC
AATATTGCCTTTTATAGCTTGGGTTGTAGTTAGTATTTAGAAAAGACATACTGGTTGGGT
GCTGCAGTTTGTCCATTTCAGGTCAGCAATTTCTAAGCTTCCATATTTTACATGAATCTA
TTTTTATGCAGGTGATGAGCTAATATCACCTTGCATGTGCAAGGGAACTCAGCAGTTTGT
TCACCGTTCGTGCCTAGACCATTGGAGGTCTGTGAAGGTACTGTCCCTTCTAGTGTTGCA
TTTTCCATATGAATTTCGGAAGGATTTGGTTCCTTTCTATCTTACAGTATACTAGTAACG
CTTGCACGTGTAATGCCCTAATTATCAGGAAATATACTAATGAAACTTTAGGTTATAGTG
TTGATTTAGTTGAAGAGTTTTGGTCATGGAGTCTGTTAAGTTAAGAGTATGTAGTCAGAT
TGGAGTGGCCTGGAAAGAAGTTCTCATCGTGTGCATTTGTCATGTCTTAGTTATTACCAA
CTGAGTTCTTCATATGGTGAATGAGCTACATATGCCCCCTCCATGTCAAAATACTTCGCA
TAATAGTTTTGTCTTAAAGTTATATTTTGTGAAATATGACCAAGTTTATAGGATAAGAAT
ATCAACATTCACAGATCAAATCAATATCATTAGATCCATAATCGAATATATTTAATTGCA
TTTATTTGGTATTGAAGATCAGAGTAAGTGCATATAAAAACGAGACAACGATAACAAAAA
CAACATTAAGCATACAAGCACATGTATAGCTGTATACCAATAATTAGAACTGCTTATACA
TATCTGGAAGTGATATGAGATATGGAGTCCAAGTCCGAGGGTTAAATAACCAACAATCCA
ATCCAATAATCTTCTCGTTTCATCAATCCAAGTCAGAAGTGGCTTCGAATCAATCCATTT
TAATTCATCCTTTTTCGATAGATGAGAAAGAAGAGAAATAAGGGAATCTGCGGCTCAGGC
CTCTTCTATGTTCGCAAGACATCTCAGTACATGCCCACGGAATGAACAAAAAAATGTTGG
TGCTTTGTCTCACAATCATTATTGGTATGTATGGCTTCATGTGCACATACACCTTGAATG
GTAAAGAATGTAGACTCTGTTTCCTAAAAATCAAGAAGACAATGATCCCAAAAATGGAAG
GTTCAGAGGGTGAATATACCCCCTCCGTCCCACAATACAACATGTCTTATATTTAAATAG
CTTGCAAAAACGTCTTTTAGTGTGGGACGGAGGGAGTATATATTTAAATAACCCTTTTAG
ACGAAGTTGTGTTCTTGTAGAGAATTTGCTCACTGCAACTCAGAACAGTGTACAGTGAAT
CTCGGAGCACATAAATGATTTGTTCACATGTTCCCATTCGAAAAGTAGAAAAGAACACTG
CATATCCCCAATCATGGAAAAAGGAAAATCACATGCTCTTTGCTGGAAATTATTGTGCAA
TGTAGACCGAAATTTCACATGAGCAATTGCATCAGCAAGGAAAGTAATAGCGAATAAGAG
TGAGCTAAATGCGTATCTCGTATCACACCACCTATCATATTAGTATCCTGGTGCTCTGTT
GTGGGTCACCAGCAAAGGCAAGGCAGATGGGGACGCCTGTCATCTTGCTGCTTACTCTGA
CTGCATCACCGCACAATGCAGGCAGCCAAGACTACGTGTGTGGTCATCATTGAGGAGCCG
TCTGTGGTGCTCAGCGGAGGGTTTGTGGCTGTGTGCCTGTGGTCGATGAGCGCGTCGTCA
CAGTGCAGACGGAGCTGACCACAAAGTAGAGGGAGTCTGTGTGTCCGTTGGGCTGAAATG
TTTTTTCCACAAGTTTCATTTGAGTGTAGGTACAAACAATAGGATTCAATTTCTCACAAT
CTTCTTCATATGTTCAGTTCAATGAAGTAGAACGAACAACTATTATAGGGGATTAAAAAT
GAAAACACCCTTATTGGGATGTTCATGGAAAAAAGGGCAGCCCGGTGCATGTAGCTCCCA
TTTGCGTAGGGTCCGGGGAAGGGTCCGACCACTTTGGGTCTATTGGGATGTTCATGGAAA
CACACACACACACAAAAAAAAACAGAAGTGCACAACAGTGTGGTTGTAAGCTGCATTTCA
GACATTAAAATGTGCACCTTGTTGAAAATGTTTTATCTTAATCAAGCCAAAAATTCGGTG
AAGTGGTATAGAAATAGCTATCTACACAGCACTACTTGCTCCATCTCCAATGGGACCAAA
TATATGCATGTCTTCAGAGGTACATCGGTATGCCTTCTCTCCGGTATGTGACTTGTTTGG
CCCAGTACTTCGCTTATGAAAGCCATGCTCATTAATGTTATACTCACCAAATGATCTACT
TTTTGTTCCCCCGTCAGACATCTTCATGGAAGAAAAACATAACACACATTTGCACATCTA
ACTTCACAGATGCACCAAAGACTAAAACAAAGCTCAATGAGCGGTAAACAAATTTCTTTC
ATTCAAAAAAGGTAGTCCACAACTAATGCAGGCGTGAAGATAGAATGATGACGTGTGTTT
ACCACATAGGAATCGTAGGTATCCTTCTGGAAAGCAACCCTAGTACTGATGCTGCCTTTG
TCAGTGTCACCGACCAGCAAGGGTTGCAACTTATTCTTCAACTCCTCTAGCCCTGCCATG
AGGGCTCGCTCGCGGTCAGCTGCAAATGTCCTGCATGGTTCACAGATTGAGAGAACCCTA
TGGACATATGGGCTGCCAGATTACATCAACGGCTACAAACAATATTTGCCTGCAAAAAAT
GGGTTTACCAAAAAGATGCTTGGGCAAACCTGATTTTTTTTCTTAAAAGAAAAGAGAGTT
CCTCTCTACGATTTCATCGATTTGGAACTACAATTCTACAAACTACGAAAGCAGGAAAAA
TGAAGGAGTGCAACTGTGGAAGGCGCTGGGCATGTTAGGAAAGCAACTTGTATTCCNNNN
NNNNNNNNNGCCGGTATATATACATGTACAGGTGGTGG
