Contig Data
morexGenes
Links



Map Locations of contig_2551893 (2621 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2551893

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38967 4 2515 bp MLOC_38967.2 Available Available LOC_Os02g12840.1, FRAME:-2, EVALUE:7e-83, 13102.m01414 protein DEAD-box ATP-dependent RNA helicase, putative, expressed





CDS Structure of MLOC_38967






Contig Sequence (2621 bp)

>contig_2551893 2621 assembly3_WGSMorex_rbca.fasta
ACTTCGACGCTTGCAGAAACGTAGCCATATCGCAGGTCTTCAGTTTCTTTTGACGTTCCT
TGTCTGAGCAATCTTCCAAACCCGATATATGATAACCTCCTGCTGAGTTTTCACTTGGGG
ATTGGCCCCCTTTTGCTGCGTTCTTCGAGTTTGTTGTGGTGGCTGCCATAGCACTTGCGC
TGTTTCCCTTGATGTCTTCATCAGCTCTTAGCTCTGCAATGAACTTTGCCGCTTCCAGCA
ATGTAGCTGTCTCTGTGTTCTTCAGTTCTTCTTTACATTCCTTGCCTGAGCAACTTCCAA
GATCAAAAGAACAATTGCCTGTAAAATCTACGCCAGTGGCCTCTAAATCCATTCCTTCAT
TCAGTGTTTCTGGAGGTACCTCAATACCTTCTTCTCTTATATCAGCATATTCCTTCCTGA
CGCTACCATTCTGTTCTGTGGTCTTCAGTTCTTCTTTACATTCCTTGCCTGAGCAACTTC
TGAAATCCAAAGAAGAATTGCCTGCGAAATCTACTCCAGTGCCCTCCAAATCAATTCCTT
TATTCATTGTTTCTGGAGGTACCTCAATACCTTCTTCCCTTGCATCTGCATATTCCTTCA
TCACGCTAACATTCCGTTCTTCTACTTCCTTCCATTGCCCTTCTATCCTTCTTACTTTGT
CTTCAATCATGAACTCGACTAGTCTAGAAGACCATCCAAACACAAAGTGGTAAGAGAAAG
GAGCACCAACAAGACTTCCTAATGCTATCCTCAATCTAATAGGCTCCTTATCTCCACTTT
CCAAACTTTCCTCATCCACCTCAAGCAGAACTCCAACTGCAGATGCCACTTGATATAGCT
CCTTCCAGTTTCTGTATGCATCTGGGACCCCATAGACCAAAAGCCACTCTTTGATCAAGT
CAAGCTTTTCCCCATCGCCTCCATCCCACATTGCTACACTGAAATTCACCTCCTTTTCAT
CCAGAAATGTTTCTACATTGGGAGGCTTTAAACAGCTTAGCAGGTCATCCTCTGAGTTGA
AGGATGCTACGAAATTCTGTCTACCTTCTCTCCTTATATCCCAGTCATCAGTCAGCTCCC
AGAACTTGTTTAGTTCAGTTTTCACTCTTGCCGGGTCCAAGTTACAGGTATTAGAAGTGA
TCAGCAGGCAGTGGTGGTACAATTTTTCATTTTTGACAACTTCCTTTGAAGGTTGGATCA
TGTAGAATGGAAAGCTTGTAGAACGTCCAAATAGCCGGGCCACAGTACCCAGTTTGTCTT
TTATCCTACATTGATCCAAATTGTGTGATGTCTCTTTACAAGCAAAGCACTTCTTTTTAC
CAGGTAAAGTAATTGGTCCTTGCTCCGGCGCAGCCATATTCTTTTTACTAATACATCCCA
TCGCTTCTGTTGCAATCTGTACTTCTTTGGCGCCTTTTGGTACAATTTGATGCCCTCTTG
CTGTTTATATCAACCTATACAAGCACATATCCCAAGGAAAAAAAAAGGGAAATCAGGACC
ACATCCTTTTAAAGAAATAAAGTAAGTGCATGGAACAAAATTGTGCTTGTTAGTTAAAAT
TAAAAGGAAGGGTTTTATGGACATATCAAGCATCTATTCGTATATAATATGGGACTATTT
GCAACCAAAGTACTGAAATAATGTCTCAAATAATGTCTTTGTTATAAATTTCAATATACT
CCCTCCGTTTCTAAATATATTATGTTTTGGTAGTTCGCTTCGAACTACCAAAAAGTCATA
TATTTAGGAACGGAGGGAGTATTAAGGTAACCCGTGGTGGTCGTGGTGGTCATGGTGGTG
GGCAAATAGAGAATATGATGTGCAACGAGGTTCGATCCCCGGGGTGTGGCGAGGGTCCGA
TTGCACCCTTCAGTTTTTTTATTGCATTAAAATCTTCTTTTGGCTCAACAAGGAAACAAA
TGGGAGTTCCAGATCTTTGAAGATCTACAGAAGAAATCAACATGAACGGTACCGTGCACT
TGAAAAGAAAAGGTAGTACTAAATTTTCAACGAAAGCTCACAGAAGATCTCATCTCAATA
ATAGAAATGATAGCATGTCAGAGACTTAATAACACCTAGAAAACATTTATCACACCGTGA
AGATACTAATCAACACCCGAAAGATGATAAAACATCGCTTGAGAGCATTAAATCAAACAG
TAAAGACATGACATACTACAATTGAAATGTAAAATGTTCGCTACGCAGGGCCCGAAAAAA
TAAAACCTTATAATAAATCACAAAAAGAACGGTGGAGACCGCCACCACGTGTCGGCCGAC
CGTTTAATCGGGTTAATCTACGCCACAAGACCAGGTTGCCATGTGATGGTGACCCTCAGA
CCCCAGCCATGTCCCCCCTCCCCCCTCCCAAATACTAAAATAGAGTAAATAATCCACATC
CCTGTCCTGTCCAGCCATCATCAGATCAACTAATGGCCCCCATTAGCCAATCAATGATTG
TGTACCATAGTACACACAAGGATTGCCCTGGACTCGGTCGTGCGCTCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCACCACCGACTCACACTCTCCCATCCCCGTCACCCACAGCCG
CACTCAACCCCCCATTCATTACATAATCAACACCTTATCAC