morexGenes - Barley RNA-seq Database

Contig contig_2551882

Source Contig contig_2551882

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_2551882 (2517 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_2551882

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_38961	1	1084 bp	AK370070	Available	Available	None

CDS Structure of MLOC_38961

Contig Sequence (2517 bp)

>contig_2551882 2517 assembly3_WGSMorex_rbca.fasta
CGCCGGCGGGTGTGTCCGGGACGTTATACGGGCGACCCAATTTGTGAAATTTGTTAGAGA
TGCTCTAAAGTGAGGAAAGCTTCCAATTGAGGAAGGAAGCACGTGACGTCCCCTTCACCA
AGCGTGTGTGGTCGCATTTGAGACTTCACCGACTCTGTTATGAGAAACTCGTGTTCTTGC
TAAGATATACTCCTTCCATCACATATTAGTTGTTGCTCTTCACCCTCACACACCCAATGC
ATCCAGCGCTAGGGTTTTGCTGACTCCCGCCGCACATCGTCTCCTTTGTCCTTAGGGCCA
TGATGACGCCGTGGATCTCGGTCTTTGCCGATAGGAGGTGTTCCTTTTTAGGTAATTTTT
TTAGCTTTAGTAGGGTTTGTGTCCTGCTCTTCGGATAAATAGATCGGAAGTTTTTCCCGC
AAAAAAAGAACTACACATAGAATTCTCCTATAGGCCCTTTGGATTATAAGAACGTGTAAA
TTTTCATATGGAACATTTATTCCTCCATATTGTGGAGGATTCCAAACATGACCTTCTTTG
TTTTCTTACTCCGATGCTCGAGGTGTGAAATCCTAGGAATCCACAAGACATGGCACTCAA
ACTATGGTGTTTATTCCAAGTTGAAATCCTAGGAACCCACTAGACATCGCACTCAAACTA
TGGTGTTATTCCTACATTCTAGAGCCTTGTTCTAAAGCAAAGAAGCATTGTGTCGCGCCC
TGGTCTTGCTTAAATCAGGCTTCTCTGATTCTTTTGCCTATGGTCTTGCTTAAATCAGGC
TTCTCAGATTCTTATGACTTGTTTGGAAGAAAGAATTTCATAGAATTTTGATTGATTGTA
AGAACCTAAATGAGCCCTCCAACCTCGTGTTGAAATTCCTTTGAAAAGTTTGAGTCAAGG
TGGGTCTCCCTTCGCTGTCGAATCAAGAACCAATTTCCCGCAAAATTCTTGTAAGGCATA
CAAACACCTTTGTGAAATTCTAAGATTGCACAAGACATTATAGTCAAATTCCTCTGTTTA
TTCCATCAGTTTGTTTTTTTATTCCTCCACTCGAGGTGTGAAATCAATAGAAAAAAAGGG
AGAGAATACAACTCAACATAAAAAAGTAAATCAGTCCAGCGTCAAAGGAACCACAAAGTT
GGTATAGCACACGAAAGCAACAGCCATCCCATGGCCAATCAGTTATCACCTCAATGTATG
ATCTTTGACAAACCGATATTGCGATATAAATTTTGGAACTGACAAGCGTTACATGAGACA
ACAAATGTGGTGAAAAATCTTCCATTCCGCAAACCCCACGTCCACCGGAATGCATTTCCA
GCAAACCCGTAGGTACTGGAGAAGCATAGCATGATCGATTGAATTTTGGGTCAGCAACAA
CACCGCAGCGGGTGTGCAGAGCTGACAGCTCAGTTTACATCAGAGCCAAGTCGGCTTTGT
CTATGATGCAGAATGAACCCTCGTAGACTCCAAAAGCTTCAGCTCTTCACGCCATCCTTC
AATCTTTTTCGTTTTCTCCAGTTGCTCAGGCTTCAATTTTTCTGGGTCCCCTTGCACTTG
TGCTTCGGCTAACCGTATCTGTAAGAAATTAAGGTAAGAGTACGCAACAAAATAAAAAAA
GCTGAAACAATTTAAATAGTGAACACACTCGTGCACGCGCACACACATGACTGAGAAAGG
GAGGGAGGAAGAACCTTTTTCTTCAGTGCTCGGATTTTCTTATCTATCTCTGGAACAGAT
GACTCCGTTTGTAAGTTGTCAGCAGCATTTGTGGAAGGGGTCGCCATAACTGGAGATTCA
GAGATAGCAATGCCACTTATGTGCTCTGTTACACTGTCCACTGTATCCCTCTGCTTAGTT
TTGGAGGAATGAACCTTGTCAGTTTCTCCAGCATCAGGCTCGTCTATATCCAAGCTCTTC
CCTTTATCATTTGTTGAACCACCCTGTTAATAAATAAGATAATGACCAGTAAGCATCAAA
CCATAAACCCATTGCACAAATCAAATAGTTGTTCAATGTAAAAGATAACCAATCATTGAC
ATGGTACTCCCTCTGTCCCAAAATACAAAGTTGTACTAAGCTTAAGACACTTATTTTGAG
ACGGAGTACAATACAAGCATACTCCTTCCGTCCGGAATTACTTGTCGCAGAAATGGATGT
CCATTTCCGCGACAAGTAATTCTGGACGGAGGGAGTACAAGAAAACAAAATGTTTGTGTT
TACCACATTACCGACAGATAAGTTATGAACAGTTAAGTGTATCTTTTATGGTTTTAAATT
TCTCAAGGCTAGACCTGCCATAATATTAATGGCTCAATTCACCAATGTTAATTCACAAAA
TAATGGTGCTACCATTTTGTAGTGTATACCATATTGCCACATTTAGGAATTGTGCAGCCA
TATCCAGTACTCCCTCCATTCTATATAAGTCTTTTAGAGGTTTCACTAGAGGACTACATA
TGGATGTATNNNNNNNNNNNNNNNAGTGTAGATTCACTCATTTTACTCCGCATGTAG