Contig Data
morexGenes
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Map Locations of contig_2551855 (3507 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2551855

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38947 1 884 bp MLOC_38947.1 Available Available LOC_Os09g08550.1, FRAME:-2, EVALUE:7e-93, 13109.m00718 protein OsFBX308 - F-box domain containing protein, expressed





CDS Structure of MLOC_38947






Contig Sequence (3507 bp)

>contig_2551855 3507 assembly3_WGSMorex_rbca.fasta
GGTAATTTTGGAAAGTGAACAAATTTTGTTACGTTAGGAAAATTGTACAAGAAAAGCTAA
AACGACTTATATTTTGGAACGGACGGAGTAGTAGCTTGTGATCTGTTGATTGTTCGGGAC
TAGATGTAGGCGGAACATGAGCTACACAATGGCGATCAAGAGCAGCATTAAAACTAACCT
ACAATGTGAAACTACTACCTAGTTTTAGGACTTGGACATGTCCCTACGCATACGAATATA
ATCAAATCTGGCTGTGCGTACATGGCACAAGAACGGTCAAAAGTGCGATAAATATTTCTC
GCATGCGACACGAGAATATCAAGGATGCTCAGATAGCAGTTTTGAGAATATCAAGTCCAA
ATGATGCTTAGATAAATTACATAAATATTGGAGCTGGCGACATTGCTTAGATAGACTTCT
AACAAATAAGGTAATAGGAGCGTTTCTTCGTCCTCGCGCTGAGTGAAGGATGGCATCAGT
GAGCCCAGAGGTGATAGGATGTGAGCTGACTTCAAGCAAAAACTGTGCTGCTTCCACATC
TCGGAAGTTAGGAACCTGGTTCACATAAATTGCAGATATAAGCCACAAAATTGCTGGGGA
TCGGATCGAACCATTATCATGCCATGAAATACTCGAAGGCGGTAAATAAGAGAAAAGCTA
AACTGATAAGCAAAAAAGAAATTTAAGCTTATGTAGATGGTACAACAAAACTAAACATGC
ACAAGTGTTCAACTTTTCCAATAGAAGATCTACTGATACAATTTCCGGATAGTTTGCATG
ATTTCAGATGAACTGAAAAATGCTGAGACTTCTTACATAAAATGCTGAGTATTGCGAAAA
AAGTATTTGTGTCAATTGGGCTGTTTGTTAAACTGAAAAAAACATATTACCAGTAGTTCG
CTATGCAGAACATTAAGCCAGGTCTATGACTCTATGTACAACTAGACTGTTTCAGAACAC
ATATTAAGCCCATGTACAAGTAAAGCAAAAGAATGCTAACAGCATTTAATGATTTCAAGC
AATCAAAAATTCGAAAATATGAGGTACTTACATGAATAAACAATTTTAAGCGCAAACGAA
ACGATGAACAACATTAAGGTTCCTTTGCTCTACTAAGTGATCATATTATAGGGAAGAGAG
TGGATTTTCAGCACCCGGGTGCCTAGGCACCTCTATGAACAGTAACATCAAAATAAATAA
ATAATCAAAAAAATCTGAAACTTTGCAAGATCAAAGATGATCAAACTTTCTAGGTGCTTG
CAAGATTTCGTGCCAAAAAAAATTTGAGGAGCTCTCTGGAGGAAAAACTTTTTAGTACTT
CAACTTTTTAGTACTTCAAATTTTACTGTTCATAGAGGGTGCCTAGGCACCCGGGTGCTG
TTACACCTTTCTCTTTAAGGAAAACACGTCATTATACTTATTTCCAGCTCTCTCCTTTTT
TAGATGGAGTTCAGCTAATCATTAATGGCTGCCGATCACTTGGTAAATTGAGTATATATT
TCAGTTCTCTTCGTTGTAGTTGTTTAGAGCCATAACAGCTAGCAATATTTGATTCATTAA
AAATTCAGGGTGCATGCATCAGATAGATTTTACAGATTACTTCTTTCTTGCCCACAACTC
TAATGAGAAATTTAGAAATGCAAGCAGAGGTATTGTGAAAGAATAGCCAGAGTTAAATCA
TATTGCAACCATAAAACATGATAGGCTGTATAACTCTCAACGATTGGCAGAATTCATGCA
CATGAATCCAAAATGTGCAAGGTCATCAGTGAAGTATTTATTCGCTTCCTAGGTACAACA
CTTATTAGTTATAACATGGAAGATTTATTTATTTTTTGGCACAGATCAAAGACAAGATAA
AATGTCCAATTCCAAACATTCAACAGAGCATATCAAATTTATTCCAATTTATGTAACAGA
CTTTACTTTTAATTCACTTAAAATTTAATCACCGCTCTTTTCAAAATTATATAGCAACAG
ATTAAAAGAACGATATCGAGTAGTAATCAACCCAGCATTTTGCAATTCTATAGACAGCAT
GTAAGCTAATCAACCCAGCATTTTGCAATTCTATAGACAGCATGTAAGCTAATTAAGTAC
AGTAGCTAGTATGAAACAAGAAGAAGTGGTCTGCCCAGGGCAATATAAGATAAATGAACC
AAAGATTTCACCAAACTCCATCACCATGATCGGTCACATAATAGTGAATGACATAATAGT
GAATGCTTTGAAGCAAAATATGATAGACCGGGATAGGGATGAAAACATGTGTACAGTACC
ACAGTGTAGCCTAAACTATGAGTAAGGTAGAGGAAGAAAGTACATGTATGCAATTAGGCC
TTGCACTACTAGCATATATCTCAAACCTAGAGGAATTTAGACAGAAATTGTGACATGCTT
ACAAATTCAAAAACAGAAATTGTGACATGTGTACAAATTCAAAAACAGAAATTGTGACCA
CTAGCATATACTCCCTCCGTTCCTAAATATAAGACCTTTCAGATATTTCACTATAAACTA
CATACGATGCATATAGTTATATTTTAGGATGTAGATTCATTTGCTCCGTATCTAGTCTAT
AGTGAAATCCGTAGAAGGTCTTATATTTAGGAACCGAGTGAGTATGTCATGCCTAGAGGA
ATGATTGCTGCACATTCATTAATTACCACTTTGAGCACAGTGACTTCTATCATCTTTGCA
AATCCTAGACCAAATGGACACATATGTGCTACCAAGTACCAACGCATGCACAAGAACATA
CAACAAACAACTAAAGGCACACCACATAGGAAAGAAGGTCAAGCAACATCGATGAGGAGG
AAAGAAGGTTTTACCAATCACCAGAAAGTCAGTTCTCTGGAGCCAGGAAGGCAGGCGGCC
ACGCGAGGAAGTAGGCGCATATCGGGTCCCCGTACTCCTTGCCATGTTTGGTGTGCAGGC
GCTCCATCTTGGCGGTGTCCAGATCTAAGGAGTAGCGCCCATATCCCATGGTTCTGATGA
ACAGCTTGCCGGTACGCCCCGCGTCCATGTCGCTGAGCCAAATAGTGAAGATCCTGTGGC
ATTTGTCCTTGGGCAGGCCGGGCACCGTGTCGTACACATTTGAAAGATTCATCTCCCTCT
CCATATGCCACCCATTGTCGTCGCTCCACCTGGTCTCCCCACGCACCCAGACCCGCATCA
CCTGGTCCTCCACGGTCGCGATGCAGAGCCGCCCGTCGTCCGGCGTCTCCCCGACGCGGT
AATTGCCGAACCTGGGCAGCTCCGCCGGCGCCCTCAGGTAAGAGAAGTGCAGCGTGGAAG
GGTCCAGCGCCAGCACGCGACCGGAGTTGCAGATGTGCCAGTAGAGCTTCCCGGCGGCGT
GCACGCAGCGCGTCTCGAACCACCAGGGGTCGAAACTGACCTCCACCTCGGTAGTCCGCG
GGAGCGCGCGCCAGTGGCATTGGCCGTCGTCGACGGAGACGACCCAGGCGCGCGGGGGGC
CGACCGCGGCGGTGACTCAGGCGCCTC