Contig Data
morexGenes
Links



Map Locations of contig_2551848 (4120 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2551848

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38945 1 1577 bp AK356027 Available Available None





CDS Structure of MLOC_38945






Contig Sequence (4120 bp)

>contig_2551848 4120 assembly3_WGSMorex_rbca.fasta
TCTAGGGCATAATTCCAACACGGTCAACCCACTTCAATGTGACCCAGTGGTCAGAGTTGG
TTTTTCTGAACGCGACGTTCACATTGAAGCGGCGATGCCACAGAGGTAGCGTCCTTTGTG
CCACCTTCCAGTCCTATCAAATCATGGGCATCAACGCCAACCGTTGCATGCTCTAGGTCG
CCATGAATGTTACACGACAATCGGCGCAACGCGTGGGATAGAACGCACAGGAAGGGCAGG
TGGGGGTTTGGATGTGCCGGGGCAGTCACCCACGATCTTGGGAGCGGTTCGGACGCCCGT
AAAGCCCCTTTTTTGTCTTCGGTTTACGGAAGAAAACACGTCCGGACTGCTTGACAAACT
ATTACAAACCAACGTTGGATAGTTTTCATGGTCCGGAGATCGTGATCCATACATATGCAC
GCGACGATCACCGTTGGAGATGCCCCGGATCTATGTTTGTTGGGGGCTCTTGCCTCAACT
CATACTTTGTGGTCATTCGCGAAACATAACAATAAAAAAAGGGCAACGTTGTGCGCCGGC
CCAATATTTCGGTCGGTCAGCCCGGATCCATCTGATTTGCATGCACGTAGCCGTCAGATC
TCCCGTCTCCTCTTCTGCATTCCATCTTCAACCTCCCATACGGAAGAAAGAGAGAAAAAG
GAGGGCGCCGCCCCCGCACAAACCGCACCCCACGCCTCGCCTCCTCATCTTCTCTCACCG
CCGGTCATCCCTAGTCGCCGCCCCTCGCCGTCGGTCCCAGCACCGCCATGATGCATGTAG
CAAAATACCTCTCCGGTTCTAGCAAATCCGAGGGATGGTTGCAACAAAAAAAAGGCATCA
CCGTAGTAGGCCGCAGCTCCGCCGTGACACATGTAGCAAAATCCATTGCCGGTAGTAACA
AAATTAGACGACGGTTGCAACTTTTCGATCAGCTGGTTGCAGCTTTCATGGTGGAGGTTT
GCCTCGTCGGAGTGGAGTTAAATGGATGGATGGAGTGCCTGCTTGAAGCTTTCTCTATTA
CTGGTTGAAACATTTTTCGTATACCGTTGAAGCTTTTTCTATCAACGGTTACAACAAATC
ATGTGCTCCATCGTCATCGCCGCAGAAAAACACTCCGACGATGCAGCAAAAATGTTGGTT
GTTTCCCGCTCTGGATTAGTAGGTTGTAGCAATTTTATGTGTTGGTTGTAGCACAGCGTG
ACAACGGTTGTAGCAAAAAAGTTCCGACATCGCCTTGTGCAATGTAGCAAAATCAGACAC
CGGTTGTAGCAAATGTCGACACCGGTTGTAGCTCCCCGCGACGAGGTTGCAACTTCTGAT
GCGAATAGTCACAGCATCGCGCGCCCATGGACGTCACCCGTTGCAGCTCGTCGGGCAGTG
GCCGTTGCAAGACGCCGTGGTCGTGGTTCCAGCAAAGCCGTCGTCGTCAACGCAACTCGC
AATGGAAAAGGAGGCGTGGGCGGCCGCGCTCTCAAGCACATGTCGCCCATCGCCGTAGGA
GCTCGTCGCCGACCCCCATGACACGGTCACGCCTGAGTCGTCGCAGGATATTTAGCTCGT
CGGCAATGGGGAGCGACAACGGGCGTGCAACTTTAGCTCACCGACGACGAGCGGCTAGGT
GGGAGAAGAAGATCGGGAGGAAGAAGACGAAAAAAAAAAGATGAGTCATACGTGTCATAC
AGAAACATTTTCTAAAAATACTGATACTTTGTGATCATTTTGTGTTATAGGTTTTTTTAT
GATAATTAAGGAAAACCCTTAATTTGGAAAAAAAATCAGAGCTGTAAGCGACTCACAAAA
TTAACAAGAGGCTATAATTCACTAGCAAGTTCAGAAAAGTAATGCTAAAATCTTAATCTT
TCTGACCGAATTTCTGATGAATATGTTGTGGCGCTTGCAGATCGGGGAGTTGGCAGGGCT
GGCCGTGGATGCAACAACCATCCTGCTTAATGTGCTCATCAGCGGTTGGGTACTAAATCA
TTTGCATTGGGGCGTCGGACTGGTGTTTCATCCGTCAAAAAGAAACCAAACGAGATCCTT
GGATGTGGCCGTCCTTCTCGCTAGGGCTAGGAGCGTTTTCACGCAGCCATAAAAGAGGGC
CGGTCATGTGAGCGAGCGAGTCCTTGGCGGTGTTGATGAGTGTCCGCTGCCACGGTTGGG
GTTGGTGTAGACCAGCGCACCGCCATCAATGTGGACATAAATGCACGTACTGTACGTGTG
CACTCTTGTGAACACGCAGCCAATGGAGATGCGCTTCTGAATTTCTCATCTCTCACAGCC
TTTTTTCACCCGTGTCGTGTGAAATGCATCGAGCATACACCTTCTGGAATATATTATTAT
TACTTCTCTACACTGTGATATTACACCAACCAACTAACTAAAGCGGAGGTTGGCTCGGTC
AATCCAAACGGCATGGAAAGTGATAGAGGTGCCGATAAATAGGCGTCCGGGTCATCATCC
CATCTATTGCCCGTCGCACATATCTGTCGTCTCTACTCATCACTTCCTCTCTTCACTCTG
GTTTACTCCTGTGTTTCCGCCGCACATCTGGGCGCTCGAGGAGGAAATGGCAGGAGGAGG
CGATAACTCCCAGACGAACGGAGGAGCTCAAGAGCCGCGCGCCATGGAGGAAGGGAGGAA
GGAGGACTATGACCAGGGCTGCGGCCTCGCCATCTCTCTCCCCTTCGTCCAGAAGGTCAG
TCCTGTGCCCTAAGATCGCTTCTAGGGTTCGTAACTTCGCATCTCTCCCGGCCTCCAATG
GTAGATCTCTCTCCCATCTTCGGACAGTTAGCTTTGCATGCCCACAAAAAAACTTGTAAT
GAAGGGATAATGCCCTGGCTGGGAGTAGGGCCCGGGGGTGCAAAAATGGCAGATTCGTAG
AAGAATTTGTTGTCACACCAAGCCATTAGCCACCCACCTAATGGCATGTCACCATGAACA
GTGACGGCTAGGAGATCAGATCCCTGATGTAGATAAGGTTGAAAATGTTGTTGTGCGATT
ACTTAATTGTGTGTGGATTACTGATTAAACTGTACGTACGTGTAGATCATCGCCGAGATT
TTCGGGACGTACTTCCTGATCTTCGCCGGGTGCGGCGCGGTGACCATCAACAAGAGCAAG
GGGCAGATCACGTTCCCCGGCGTAGCCATCGTGTGGGGCCTCGCCGTGATGGTGATGGTG
TACTCCGTCGGCCACATCTCCGGCGCGCACTTCAACCCGGCCGTCACCTTCGCGTTCGCC
ACCGTGCGCCGATTCCCGTGGCGGCAGGTGCCGGCGTACGTGCTGGCGCAGATGCTGGGG
GCCACGCTGGCCAGCGGCACGCTGAGGCTCATGTTCGGCGGGCGCCACGAGCACTTCCCC
GGCACGCTCCCTACCGGGTCCGACGTACAGTCACTCGTTCTCGAGTTCATCATCACCTTC
TACCTCATGTTCGTCATTTCGGGCGTGGCCACCGACAACAGAGCCGTAAGCAGATCGATC
TCGGTCGCCGAATTAACAACAAACTCACGTATAATTCGCCAACGACTTGACGAAACTGAT
GCTTGCAGATCGGGGAGTTGGCAGGGCTGGCCGTGGGTGCAACCATCCTTCTTAATGTGT
TGATCGCTGGGTATGTACATGAATCGTACTTACCTCCATTGTTTTTGTTTTTCTAAACAC
AGCACATACGCACACGTTCATGTGTATGTATACTTGCACAATACATGAACACTTGCACAC
GTCGTACGCGCATACATACGCACACTTGGACATCCATGGTCACAAGCAGCACATACTATA
TTTCAACCGCGCGCATGAGTCCATGTAGAATTTTCGTAGTCAGCAGAACAAGAATATTTG
CAGTGGGACATTGGACTTACGCTATCGTGTTTCAGTCACAAAAGATACTACTAGCAACTG
AAAACCTAGTAGTAGTATCATGTTTCATCAGTCAAAAAGAAATCAGATGCGGCTGTCCTC
TCCGATAGGAGCGTTTAGAGCATCTCCAACAGTCCGTATGTTCAATCGTTTGTATAAGTG
TCCACATCAACAATCAACAACACAACATATAAGAGCAAGTACAATAAGGTACAGTCAACA
GGTTGTAATAATTAAAATACTATATTTTTACTGAGTTGGA