| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_2551718
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_38901 |
4 |
2854 bp |
MLOC_38901.1 |
Available |
Available |
LOC_Os04g55360.1, FRAME:+1, EVALUE:0.0, 13104.m05739 protein ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed |
CDS Structure of MLOC_38901
Contig Sequence (5897 bp)
>contig_2551718 5897 assembly3_WGSMorex_rbca.fasta
CGCCGCGCGACCCCACACCCCCCCCCGCGCCCCGCACGCGCCGGCGCGTCGACTACCGCG
CCTGGGCGCCAGATCCGGCCGAGGTCGCGCTCGTGCGATCCGCCGATCCCACCACCTCCG
CGTCCGCCGCCGAGCCGGCGGGCCTGCGCGGGCTCAACAACCTCGGCAACACCTGCTTCA
TGAACTCCGTGCTGCAGGCGCTCCTCCACGCGCCGCCGCTCCGGAACTACTTCCTCGGGG
ATCGCCACAACCGCTTCCTCTGCCCGCGCCGCACGCCCATGAGGCACCGTACCACGGATG
CCGAGGCCAAGGCCGCGTGCCTCGCGTGCGATCTCGACGAGATCTACTCTGCCACCTTCT
CGGGGGAGCGCACGCCATACAGCCCCGCCAAGTTCCTCTATAGGTCCGGATCTCGAGCTC
TATTTGCATTGGTTGATGTCGGAGTGTGATTTTGTATTGCGGAAGTTAAGCCCTTAGTTA
AATGGCTGTTTGAAGTACTGTTAGCTATGGGCAGTGGCTTGTTTGAGACAACTAGATTGT
ATAGTCTCCTGCAAATTATAGTGCGCTATTGCCACACAACTGTTTGAAGTTAGATCATGC
AGATTGCAGGAATACTTAATATGAATCGAATGATACTACAAAAGATATTTGTAGCTAAAA
GGGACAAAGTCTGCTCAGTGTGTATTGCTACAGAAGGAAAATGGTTGCGTAGCATGTATA
TGGCCTGTTTGATGAAATGCCCTCGTATATAGAGCATATATAGCAATGCCTTCTTATGAT
TGTGCAAGTACTTTTGGCATGCCTACCTAATAAATGGTCGCTGAACTGTAATTATTGGTC
AGGTGATAACATGCATGAGCACCTGTTAGTTCCTGTCAAGTCACTTGTTTGACTGGTTGT
GAAGCATGCACGCTCTCTATTGCTGTATTCTTTTGATTTTTCCTTCGTTTAAGTCTATGC
TTTTGGGTAGGCAAGTATATAGCATCTGTGGTAGGCCCATAAGTATTGCTAGTCTTGTTG
ATACTTTGCCAGGGCCTACCAAAAGTTTCTTATTTCCTTGGGAACCAACTGTTTATATTT
TATACCTTTGCTTCACACAACATGTGTGTGCTATGTCTTATAGCTATTTTAAAACTATTG
TCATCATAGGGAGAAATACTGCAACACTTCTTAAGCTGAAGTTAATTTTTTAAACAGTAA
TTCATGTTTGTAAGAACTAAGCAGTTACCTTGTCTTTTTGCTGCTGATATTGTTTGATGA
ACATGGGCTTGCACAGGAAATATGATGCACTACTTGTTTCTTCTGGTTTATGAAAGAAAG
TACTTGATTTCCTTCTGATTACTATCGTTCTGGATTCTTAGCTGGTGGCAGCATGCAACA
AACCTTGCAAGCTACGAGCAACAGGACGCACATGAATTTTTTATCTCCATCCTTGACCAT
ATTCATGAAAATATAAAGGATGATCAGCCTAAATCACATGAACAAGGTAGTTAGCTCCTC
TCTTTCTACTCTTTGATTGAATTAAAGACTTGCATGTATTGCAACGAATTCAGATATGAA
CTAAACCTCATAAATTTGGCAAATTGCTTTCAAGATAATCACGTATTCTGTATGCAGTGA
CTGTCTTGATTGGGGACACCCTTTCTTTTCTGGATCAATCGTTTACAAGTTGCATGATGC
ATCCTAGTATAATTTGTGACACCTTAAGTATTGTTCTTAGTTCTTGCTTGTCCTACTAAC
CTTTGGAGGACAGGCAAACAAAAGAAGTGGGAAACAATAATCATCTTCATGTACTTGTTT
TTATTGGTAATGATCTACTTTGTCTTGCTTTTGATATGCTGGACTATGATTTATCTTGAG
AAGAGAACTGAGCGTCGACCAGTTGGCTTGAGGCATGCACAGCCGCGGCGCCCAGCCCAA
CAACCGCATTTGAGCATTGTGCTCCACCGGGGGTGCTCATGGCTATTCCCTTAGTTAAAA
GTCTACAGTAGCTATTCTCTTTGGTCTAGTTTTTTGTTTTTTGAGAAAATGATTTATCTT
GAGAAAAATATTCCTTGGGGAGAAAGAAGAGCTGTTATGTACCTGTCTTGTCTTGCATAC
TTGACTGCAGTTTATCTTTACAAAAATATCCTGTTATTGTTTTTTGTTCTAACGTTGATT
CCTATTTTTTTGCTCATAATAGGCGATGGAGACTGTTGCATTGCACACCGGGTGTTTTCT
GGTATCCTGAGATCAGACGTCATCTGCACAAATTGTGGGTTCTCATCCACAACGTTCGAA
CCTTGCATGGACGTCTCTTTAGACTTGGATTCTGGGCATAACAATTGTCTTGGTGTTGCA
AACCCAAAGCCGCATGCGCGCAACGGCATGAGTTCCAAGGTATCTACACTCATGAGATGT
TTGGAGCGGTTTACCAGGGCTGAGAGGTTAGATGCTGAACAGAAGTACTTCTGTGAACGT
TGCAAGGAGAGGCAAGTCTCCCTGAAGCAAATGTCCATTCGGAGGCTTCCGTTAGTTTCT
TGCTTTCACATCAAGAGATTTGAGCATTCAACAGTTAAGAAGATGTCAAGGAAGGTTGAC
CACTCTTTGCAGTTCCCTTTTTCTCTTGACATGACACCTTACCTGTCATCCTCCATTCTC
AGAAGTAGATATGGGAACCGCATATTCCCATCAGAAGCATGTGATTCAGATGCAGTTTCT
GAACTGCCTTCAGAATTCGAGATATTTGCGGTGATCACACATAGCGGTAAACTAGATGCA
GGCCACTATGTGACATATCTGAGGTTAAACAATCAGTGGTACAGATGTGATGATGCATGG
GTAACCAGAGTTGATGAGCATACTGTCAGAAGTTCTCAGGCTTATATGCTCTTCTATGTG
CAGAAGACGCTTTACTATAAAGCTTGTGAAAGAGCCGCTGCAGTCTGAATGATTTGGAAA
CAAATGTCGATGGCCTTGTTCTTCACCACCAGGAAATACAGTCATCATCTCGTGCAACAT
GGTTTCACCCAGAGAGAAACGGCTGGCGTTTTTAATATCCCAGCCACCAAGGCAGATGGT
CAAGTTTTGTGTTCTCATTGACCCCTGTAGATTCAACCGGAGTTATTTTTTTGGCGATAT
TTCAACAACCAGCCATCCAAAGGGAAGGTGATCACATTTATGTGTTGGGTTATCTTGTTA
TCCTGATCAACGGATTTATTGTGTGTGCTTTTTGTTGAACTGAAAGCACTTCAGTAATTA
ATTCATACTACCATTGGTGGTGATGGTGATGGTGGTCCGAAGTGCAATACTATGTAGAAG
TGAGAGAAAAGGGAACCGAACTTTTTGATGTGTTCCTTTCAGTAATTGAATACCATGTCT
ACTGAAGCTAGACTGCCTTGGCCCTTGATTCGATGATTCAATTTGTTTGTTCTTGTACTT
CATTGGTAAACTCAGAGATATATTAGATGAGATAGTGTTTGCCCTTTTTTTTCTGCCTTT
GCTCTGTTTTGGGGTTTGTTTCAGCTGTGCATTTTGCAGTTAAGCAAACAGCGCATGCTG
ATGCGAAAACTTCACAGAATAAGCTCGGCGGCATCTCATAATATTGTTGAAGTGCTTTTG
CCCTTTTTTGCGACTTTGCTCTGTTTCTGAATTTCTTCAACTCTAGATTTCACAGTTCAT
TAAAGAGGGCGTGCCGAACTGGAGTTACGAAACTTTGCAGGATATAAGATCTACTCCCTC
TATCCCAAAATAAGGGACGCAAATTTTATACTAAGTTAGTACAAATTTCGTATTAAAGGA
CTGATCAATAGAGGAAGGACTCTGGGTTGCGTCTGTAGGTAACAGCAATGTGTACACCTG
TGGTTGTCAGTGAATTGAAATAATTTCAAAGGGGCAGTGAGCGTCGCCATCGTTTCCAGC
ACGGAGGAGGAACGTGGGGATTCCTCTGTCAGCTGTGGCCTGTAGGTAATATGCCTGTAG
GCTGACAAGCCATTGAGCGCGACACTGTTGATGATTGCTTCTAGAGCATAGCACATCACT
GAGATTATTTGAGTGTGGCGGCACCCTCCACAACGCGTACGCAAACAGCGTGCGCGACGT
GGCCTCCGTCCTTCCACTCGTTTCCGTCCCAGTCCCAGCTCTATCATCTTCCTAACACGG
TACTTATAGAAGATCTGTTTTGTCAAAATTATGCAGCTTGCTCTGATGATCTGTTTTCAT
AATAAAAGGTGCTCTGGATAAATATGACCTCCATCTACCAATAGCCATTGTAATAGCTAG
AAATTCCTTTTTATAAATGGAAGTTTTCTGACTAGCCATTCCCAATGCTTTGCTGTAGTA
TGCAACAGGATGTCCTTCTTGAGACAGCACAGCTCTCACTCCAGTGTTGCAGGCATCAGT
TTCCACCACAAATGTTTTGTCAAAATTTGATAAAGCTAACACAGGAGTGTTGGCCATAGC
TTGCTTGAGGCTCTGAAAAGCTTGTTGGCCAGATTCAGATCACACAAAAGCTTGTTTCTT
AAGCAGATCAGTGAGAGGTTTAGCATCAGCCCATAATTTTGCACAAACTTTCTGTTGTAG
CCAGTCAGTCCCAGGAAACCTCTTAGCTCAGTGATTGTTGTAGGCACAGGCCATTGTAGC
ATAGCCTCTGTTTTTGAAGGACCAGTTGACACTCTTTGTGAGAGATAATATGCCTTAGGT
ATTCCATAGATTGTTGGGCAAAAGCACATTTACTTTCCTTCACAAACAACTGACGTTCCT
TGAGAATATCAAATACAGACTGCAGGTGTTCTAAATGTTCCTCAAATGTTTGATTGAAAA
CCAATGTGTCATCCATGAAAGCCAACACATATTTTATGTTTGGCCCTGCAAACACAAAAT
TCATCACACATTGAAAAGTGTTTCGGGTTGTGGTCAGACCAAATGGAACAACCCTGAACT
GAAGGTGTCCATGGTGTGTTTTAAAAGCAGTCTTAAATTCATCTTCTTCCTTCATTTTGA
TTTGATGATATCCAGCTCTAAGGACCAGTTTGGAAAACCACTTAGTGTCCCCTAATTCAT
CAAGCAAGTCATCAATCACTGGCATAGGATTTTTTTAATGGTTAAAGCATTTATTCTTCT
GTAGTCCACACAAAACCTCTATGTTCCATCTTTTTTATTGACCAGTAAAACAGGAGAAGC
AAAAGGACTCACACTGGGTGTAATCAGACCAGATTTCAACATTTCTGCCACCTGTCTCTC
TATTTCATCCTTCTACACATGAGAGTATCTATATGGTCTGCAATTGACAGGCATACCATC
AAGTACGAAGTGAATAGAGTGATCCAATACTCTATGAGGAGGCAGTGTTTTAGGTTCTTG
AAACACTGTTTGATTCGTTACTAGCAACTGCTGTACTGCAGGAGGTACTTCTAGAGAGGG
TGTCATTACTATATGGTTCAGTATAGTTGTGGCCCACACATCATTCCCCTTCTCCCACTT
AAACAGTTGTTCAGTAGATATTTCTTTGAGTTGTTCTTGTTGAACTGGCATCACTCCTTG
CAGCCTGAGTTCTTGGCTCTCATGCTGAAACTGTATCCATCTCTGTGCCAGTGACACTTC
ATTATTCCCCATTGTTCCAACCAGCCCATACCCAGGATAATGCCATGCCCACCCAAAGTA
AATACTTGCATGGAGTTACTCAAACTATGTCCTTGTATCCAGCAGGTCAATTGAGGAACA
AATTTAGTACATGACACTAGTGTTGGAAATATGCCCTANNNNNNNNNNNNNNNNNNNNNN
NNNNATATTTCCTTGTTTATGATAATCATTTATTNNNNNNNNNNNNNNNNNNNNNNNNNN
AAACTCGAATACATGTGTGGGTACATAAACAACATTGTGTCCCTAGTAAGCCTCTAATGG
GCTAGCTCGTTGATCAA
