Contig Data
morexGenes
Links



Map Locations of contig_2551588 (3538 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2551588

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38860 1 2227 bp AK361157 Available Available None





CDS Structure of MLOC_38860






Contig Sequence (3538 bp)

>contig_2551588 3538 assembly3_WGSMorex_rbca.fasta
GCTTCCATGCTCTGCGGGTGTTGGATGTTGCTAGATGTTATTCGTTGGAAAACAAGCATG
TAAAACACATAGGAAGTTCGTGCCAGCTAAGGTATTTACGAATTGACAGTGTGAACATTA
AGGAGCTTCCTTGGGAAATTGGAAAGCTGCAGCACTTAGAGACTCTAGATTTGACAGGCT
GTTATTCACTTCTAAGACTGCCATCATCCGTGGTGCAGTTGCAGAAATTGGTGCGCCTAT
TTGTCAGCACTCACACACAATTGACTGCAGCTGGGTTTCGGAGTCTGCAGGCCTTGGAGG
AGTTAAGCTTTAAGAAAACTGACGACCCTGTAAGATTTGCGGAGGAAGTAAATGAGTTGG
GCAAATGCAACCTTCGCTATCTTGTTACCGGTTGGGAGATAGTCAAGCGTCTGTTCTGTA
ACCCATGCTGCACATACACGTGCCTCCAAGTTCTTAAAATCCAGTCACCTATCCGAATGG
TTCCCAGGGGAATGGCCTCTCTCGATAATCTCGTGAAGTTGTGCGTGACGGTCATGGAAT
TTGATAAGGAGGGTCTCAGTGTCCTCATGGGCATGCCTTCTCTGGCCCATCTTCAGCTCT
GCGTAGATGGGGCCATCAAAGAAAAGCTGAGCATAGGTAGCGATGGATTCAAACTGCTAA
AGTTCTTTGACTTCCAATATTGGTCTTACTACGGTCCTGGTTGGGAAAAGGAACCAGCAA
CGTCACACCAGGGGCGGCTAACATTCGCACCAGGTGCTGTGCCATCACTCCGACGGCTCC
GTCTTGAGTTGACCCCCATATGGGTGGCGTCAGACTTTTTTGCAGGCTTGGGTGTCGAGC
ATCTTTCAGTCCTTGCACACCTCGAGGTCTTAATTAATTGCTTCAAAGTAGCTCCAGGAA
TGGTGGAGATTCTGGAGTGTTCTGTTGAGAAAGCAATCAAATTGAACCCTGACCTTGAGA
TCCGTGTCAGCAGAAACATGGAGGATGACATGTTTAAGTCTGACAAGGAGTGGGAAGAGT
ACGTCTCAAAATTGAAAAAACCCATGCAAAGAAAAAGGGGTCTGCCTCTGACGGAGAGAC
CAACCACCCAAAACTAGCTGCCTTGTTTTCTTATCTAATTAGTGTTGTTCATCCGCTCGT
TCTGAAACAATAAGAATATGTTCCATATACATTGTGCTGAATCAAGTCATGCATCTGGAG
AGCTACACGGTCGCCCGATCCATTGCTGCCACTCAACTGGCCGGCCACAATAAGAATATG
TTCGATATACATTGTGCTGCAAGTCTGCCACTCAACTGGCCGGCCACCAGCATTTGATTC
AGTATGTACTCCTAGAGAGGTAATCCCACAAGCGATGTTTTTTTTAGGGGGAGAAGCGAA
TTTGTTGAGTAGATGATGTAATCAAGGTGCTTTATCTGTAATACTGTACGGGCTAGTATT
TTCTTCCCTAAATCTATTTGCCGTCGAGATGTGTTTTTACTTTTTAATTCGTCGCTGGTG
CAGCACCCCTGAATTTTATTTAACTCTCTTCATAGCAAAACTCTGTAAGTGTTTGCGTGC
GATTTACGCAGGCTTGAACTCGGTTATGTATCATGTGTAGTATACGTGTTGGTTGGCAGA
AGTTCAGGGCTATGTATCATTTGGTTTTGGAAAAGTTCAGAGTTATCTAGTTCTCTGTCA
TCATTTAGTTGCGTCGATACATGGGATCTTGGGTTATTCAGTCAGGGAAATCGATCAATG
GAATCTTGTGGTAAGTTGACCCCGTCAAAATTCAGACATTGGTGCCCATCGTGTGTAGTA
TACGTGTTGGTTGGCAAAAGTTCAGTGCTATGTATCATTTGGTTTTGGAAAAGTTCAGAG
TCATCATGCCGTTGCGCCGCCTGTGACTGACAAACTTGGGTTATTCACTCAGGGAAATCG
ATCAATGCAATCTTGTGGTAAGTTGACATAATCAAACATTGGTGCCGATCTGTGGCTGCA
CATTCTTGTGGTCTCGACCAAAATCTAGGTGATGTACTCTTGTAGAGAGCAGCATCAAGA
TGTGATCTCAGCTGAATTTCGTCGAACTCTGCCCCTGCACCGAGAGCGGGTAGGCTGCCA
TCCAATCGATCAGAGCCGCATGAGCTTCTTGGCATTTGTCCCTAGATTGGATTGGTTAGT
TGCTCAGCGCAGCACATTGTCCCATTGATTGGATTGGTTACTTGCTCAGTATTTACCAGG
TCCCTCGCTGTTCGTAAGAGTTGGAATAATCCCAGGGCGACAATGGAGGAGGCGCACAAC
AGTCAGCACAACAATGCACCGCGACTGAACATGATGCAGCACCCCTGTGACTGTGACTGC
CGATGCTACCCACTGCCGTTCCCTGTGACTAGTTACGGAATGTGTAAAAATCCAGGCCAA
ATGTTTGTGCAAAGGACTCAATAATAGTACTCCCTCCGTAAAGTAATATATTTAGTGATC
TAAAACATCTTATATTACTTTACAGAGGTAGTATATATGTGCAATCTTTATGTGTCCATT
AAACAAATGGACATCAATCAATAAAAACAGAGTATACCTTTTAACGTCACCTAAATGTAC
ACAGGAAAATAGAATTTAAACTTTGCTTACTTTCCCTTTCACGAGAATAAATGAAGTAAC
AGTAAATGCAAATGTGCAAGATATCAAATTTCAAATGGGTGAAAGAAATGAATTTACTAA
AGCAACCAAACCTTCTTAATTAAATAAATAAAACATGGCTGAAGATGTTACGCTTGTCAG
TCTGACTTGAGCGAGCTTAATGACCTGCTGAGAAGCCGTAATCAATCGCACGCAAAGAAA
TAAATTTCATACTATATATTCTCAAACAAAAAAATACACGGCCGTGTTTTTTCATTATAG
CAAAAAACAAAAATATATCAGCTGTAGCCTAAGATGGTCCCAGCTTACAATGACATTGAG
CAGGAGAGAGTCAACATGTAAACCAAGAAACCACACAGATACAAGCAACAATCAAGCGCC
TGCCTTCTACATACGCAAGTTTGATTTTAATCTTTTGCTCATCCGAATACTAGTAAGACA
CAAATATTAGAGAATAAAACTTCTGCTCATCACGATACCAGTACATGTGAAACTGGCTTC
ATCATAAGATCTAGTACTGTACCATAAGAAAAGTATAAGCCAATCCCGTGCACACATGAT
TAGATAATTGTACTTTATTGGTGAAATAATCAAGGAGGCCCGTCAGTAATAATACATGCA
AGTCCATTGCAGATAATTGCAACTGCGTGGGAGCAAAAGTCCCTGATAGTGCTTCCATCA
GGTATGCTTCATCTTCTTCGTAACTTTTTGCTGCACGGCGTCGGTGGAATGGAAGAAAGA
GAACCTCCAACGCTTGCAGAAAAAAAATGTTCCATGTTAAGAAAGCAACTTATCTGTATT
CAAGGCTCAAGGGGCATATATATATTATACATGACTTGAGGTGCAAGGANNNNNNNNNNN
NNNNNNNNNNGACTCCTAGACTAATACTAATACTTTCTAACACCCCCCTCAAATGCAA