Contig Data
morexGenes
Links



Map Locations of contig_2551489 (4437 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2551489

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38823 1 1542 bp MLOC_38823.1 Available Available LOC_Os12g37910.2, FRAME:-3, EVALUE:6e-83, 13112.m03903 protein GDSL-like lipase/acylhydrolase, putative, expressed





CDS Structure of MLOC_38823






Contig Sequence (4437 bp)

>contig_2551489 4437 assembly3_WGSMorex_rbca.fasta
ATAGCATACAGCATACGAAGCTATCCGAGGGGGCTCGGGGGCACCATGTGTGCTTTCGAT
GGAGAAAGTGTATAGATTGTATAGTGCAATATATTGTAACAATCTAAATAATTTCTCTTA
GTATTTCTCCAAATCCTTTGCTGAAATGTGTTGTTTAAATGAGAAAAAAATATCTTTTTT
CCACCGTGCTCATCTCTATGTAATATATGAACTTAAATACTTATGCCGCAGCAACGCGCG
GCCAATAATCTAGTTATTTGATATATGTAGATTAGTTAATTATTACAGACGGTGCAGGGC
GTGCAACACGTGTGGACATGGTCATTGTACCCCAATTGTCAGCTAGCAAAGCAGATGGAT
CTGTGGAGATGATCATTGTACCCCGATTGTCAGCTAGCAAAGCAGATCGATCTGTGGAGA
TGATCATTGTACCCTAATTGTCAGCTAGCAAAGCAGATCGATCTGGAAAGATATCGGGTG
ACCACAAACCACTGTGCTATGTACGTATCAGTATGTGTGTGTGTGTGATGCCGCATCCAT
CATCTTCTCACGGTACCATGTACTGCACTGCATGCTTACTTGCATGTGGCCGGATGGACC
CGACTATTGACCACAGGGCCGGATGGACACCAAACATCGATCTACAGTTTGTCTTGTTTG
TTTCTGAGGATACAAATAATTGATCAGCAGCTCATGCAAATAATTGAGAACGCTTGCTTT
TCTATAAGCTGTTTTCCATGTCTATCACTCTGTTTCCCAACTGTATTAGCCTAAGCCCAT
CTTATCTTGCATTTGTTATTGTACGGCTTTAACTTAAGTAGAAAGAATTTGAAAGCATCG
CATGTAACTAGCATATACTCCTTTCGTTCCTAAATATAAGTCTTTTAAGAAATTTCACTA
GGAGTCTACATACGGAACAAAATGAGTAAATCTATATTTTAAACTATGTCTATATACATC
CATATGTAGTCCACTAGTGGAACCTCTAAANNNNNNNNNNNNTAGGAACGGAGGGAGTAT
ATGATAAAATTCAAGGGCCTAAATCAACTAAGCAACAACAACAAAAGCCAAAAAAAACAA
TAGAGACATTTATATAACCATGTTATATTGGGTGTTCCAATAGCATTATACAACCATTTA
TGAGATTTAATACATATTCAAACGTGTATTAAATCTCATATTAATGTTGCCTTATCTCCC
ATTTTTCTCTCTCTCTCTCTCTCTCACACACACACACGTGCACGCACACATACACACACC
AGTCACACACAAAGAGTAAAAAGACGCGCATGCACACACAAACACACGGCGAGAAGAAGA
AAAGAACGTCGCATATGCACCGGCTTTCAGGGGAAGTCTAGTCTACCTAGCTAGTGTGTT
ACGCATGACAGAAAAAAAAAGACTGAGACCAGATTACGTAGGTGTAGGATTATTGGAAAC
AGATATCCGAAAGATAGCAAAATCGACATTTCAATTTCAGGCGACTGATGTCCAGCAAAA
CTGCTTTATTACACTCACATAGTAATCGAAGGGCAAAACACAACAAGAGATCGAGCTAGT
TGCACGTACGGAACAATAACGTGAAAATAACACACTTATTATCTAGTACTGCCTCTGTTT
TTAAAAGTACAAGATGTTTTGGCAGTTTCAAATTAAACTGTTAAAACATCTTATACGTAG
GGCGAGAGGGCGTACGGCCATTCCACATGCACGTGTGCGCATGCATGCATGCATGCATGC
CATCCATGGTTTACTCGTCGGCGACGACCATCTTGATCGCAGGAGATTCGTTCTTGCCCG
TGACGAGCGTGGCGAAGTTGACGGGCTCGCCGTACTTGGGGCCGTTGCCGTAGAAGAAGG
CGACGACGCCGCGTTGGATGGTGGCGTGCGTGGGGTGGAGCATGTCCCAGAACATGTAGT
CATCGTGGTCGGCGGCGGGGCACGCCGTCGTGCCCGGGTGGCTGCACATCACCTCCGCGT
TGAGCTTCCCGGAGCCGCAGCACGCCGTCTTCACGTGCCTCAGCCCTGGCCACGAACGCA
TGCATGCACACACTCCACATCAATTCATGAACCCTAGCTCATTAATCATAATAAGCATAT
ATATGAAATTAATGGTTAGCGCGCGTATCTGCGCATGCAGACGTACCGGCTACGAGCGAG
TTGTCCATCATCTCGTTGAGGATGTTGTAGTTGGCGGCGACGGAGTACTTGAGCTCCTTC
ATGGTGGCGGCGGCGGCCTCGGCGAGCTTGGCCTTGAGGAGGCCGTTGAACGCCTGCGCC
AGGGAGTTGGCCTGCTGGTTGCACTCGCCGTTGGGCATGCCGGCCCTCTGCCCCGGCGTG
CACCCGATCGGCGGCACGTCGAGGATCCCCACCATGCGCGCTCCCATGTCGTAGAGCGCC
TGGATGTGCTCGATGTAGGTGGTGACCATCTTGACGACGTATGCCTGTGGGCTGGCGGTG
GAGGGGTCGAAGGCGGAGAAGTCGTTGCCGCCGCCGCTGAGGAGGAAGAGGGACCGCGCA
AGGTGCTCCTCCTTGCTTGGGTAGCAGATCATGTTGTCCGCCGCCTTCTTGAAGTACTGG
ACTTGTGTCCGCATCGTGAGCGTCCCTTTTCCCTGCAAAGTCATGAATGCTACTGTATTA
ACCAACAAATTTATATGCTCTTGAGTGGCATTGTAATCGATCACACAAGGTTGAAGATGT
TTATGTACCGTGGTGTCGAGGATGCCGGATCCACCGGAAGCGTAGTTGGCGCCAATCTTG
CAGAGGCCGAGTAAGATCTTGTCGTGCGGCAGCATGGAGAGGTACGGCTTGGGGCTCATC
TCGAAACCCAGACGTTGTGCTGCACGTACAAACATAGTACATCTGTATGAGATTTGGCTA
CCTGGCTGCTTACTAAATTAGTTTGTGAGTATTATGCATGAGCTGCATCATCCAATTTGT
GGGTCAATTTGCACTGTTAATTTCGTCATGCCATACACGTTCGTCCGTCCACTTAATCAT
TACTTATTAGTTATATCAAAATGCATGTCGTTCATATCTCGATTAATTTTTTAACTGAGT
TGAGTTTGTATCTTCACATTAAGCTCTTGCTTTTAGTATCCACGACTTTTCAAGTTTTCA
TTCACAAATTAATCAATTTAGTTGTTAACAGTCATGCCCGTTCGAGGTCAAAATGTACGC
GGAGCATAACATTTAGCAATAATAATTAAGCATGCACGTACGTAGTGGGTGCATGGACAT
GATTAACACTTACAGATGACGTCGGCGAGGTTGTAGCCGTTGGTGAAGCGGCCGGTGGGC
CTGCCGGGGAGGTCCATGCCGTACGGCCGGTTCGCCCTGGGCGCCGGCGCCGGCAGGTAG
TCGTTGTTGCCCACGTCCACCAGCGAGTCGCCGAACACGTACACGGCGTTCACCAGCCGC
CCCCCATTCTCGCCGCCCGCCGCCGCCGCCGTCGAGGCGCACACGGCGCCGACGAGGACG
AAGCAGAGCAGAGCAATGCTCCTCGCCATGGCCGCTGCTGCAAGCTCTCACTGTGGCTGT
GGTAGCTAGCAAGAGGCAAGGGTGGCTAAGATAGGTTTTGGTGTGAGGATGCCGGTGTCC
GATGGGCCGGTATTTAAAGGGCCGGCCGGGTGGATCGACGGAGACGTGCGTGGATCGAGT
CTGACCGGGAGACGGATGGACGGACGGACGCCTACCGTCGGTGCATGCGTCCATGCGACC
CGAGGAACGCATGCCATCCATGGTGCACAGAGACGACAGTGACCTACCTTGTCCTCGCAT
GGGGAGCGTGATGCATGCGGGAGAATGTGATTTGTTGCCATGCATATGTACGATATGTAC
TCAACGCATCATTTTCTCTATATAAACAGGTTTTCACCCAGCTTTGTAAGTAGAGGTCAA
GCGTTCAAACGGATACGAAGTGACCCAATGTGCATTCAAGTATTCAACCGAACACCGAAT
AAGTAAATTTACCGGAGCCGGGATGTACCCGTGAAACATCCGTCCTTCATGTGAACATCA
AGATGGACACTGTCCTTTAACAAATAAATTAAAATATCTTTTGTCGACTGAAATTTGTCT
CTATACTAGCCAGACACCATCTGATCAATGGCCCTGTTTGGATACTCCAGCTTAGCTAGT
CGTTAGAGTTAGTTTCTAGCTCATGACTAATCCTAAACTAACTCTAGTCAAATAGGTGTT
TGGATGGAAGGGTTAGATTGATAATAGATGCACTTTATAAAAAGAGAAAAGCGTTTTTTT
AATGGGCCCCACGAGAACTAGCTCCAATTAGCATCTCTTGGCTGGTGGAAGAGAGAAAGA
AAAAAATATTTTTTAATGAACCCATGAGAACTAGCTCCAATTAGCACCTCTTGGATGGGA
TAGTTTTTTTGGGTGAGTTAGATGCAACTAGCTCCAATCTAACCCTTATGTTTGGAT