Contig Data
morexGenes
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Map Locations of contig_2550899 (5722 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2550899

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38616 2 1311 bp MLOC_38616.1 Available Available None
MLOC_38618 1 343 bp AK249331.1 Not available Available None
MLOC_38617 2 1570 bp MLOC_38617.1 Available Available LOC_Os03g05450.1, FRAME:-1, EVALUE:7e-46, 13103.m00589 protein expressed protein





CDS Structure of MLOC_38616






CDS Structure of MLOC_38618






CDS Structure of MLOC_38617






Contig Sequence (5722 bp)

>contig_2550899 5722 assembly3_WGSMorex_rbca.fasta
CCGCCGCCCTGTCCTCAGCCGCCACTCGCCTCTCCTCTGCCCACTCCGCAGCCGCCAGTC
ACGAGACTTTTTCTAGTCCCTCATGTTTCTTTATCTAGGGACTAAAAGAGACTTTTTNNN
NNNNNCCCTAGGTAAAGAAACACCACCTTAGCTCGCATCTTCGTTTAAGGTGGCAGTTGC
TAGATCTCGAGACCAAGACTTGCCCTTCATTAGTGTATCATGATGGACTTCTTTACAACA
TTTACAAAACGAAAAAAAACTCAAGCGGGTCTCTCAAATCGGTCTTGAATGTTTTGACTG
TTCGTCGTCCCTCGTATTCAGCTTATAAATCTACAAAAATAAATATGAAACGGCCGAGGC
GCATCCACGACATCGATTTGACCCAGTTCGCCTTACCTGTGCTTAACAAATATTTCCATC
CCGGCCACCGAAGACCAAAGCTAATCAACAATCCGATCCACTCCCATCTAAGTTCACTCT
ACTTTCAACCCCTCCCCCCCCATTCGAATCGATGGCCAGCGACGACAGCCGCGCGGGCTT
CGATGGCGAACCTAGCGGGCCTGGCGGATCCGATGATTGGTCGAGCATGTTGTGCAAAGC
GTAGTCGGGCGATGTGGAGATGTGGAGGAGGCCGCCCTCCGAATTAGGGATGGGAAGTGG
GTCCCATTTAAACCGACTTATTATCTAGTAGTTCAAAAAAAATATTTTTTTCCAAGAAAA
ATGAACTATGAAGCCAGAAAAAGCTTAATGAATGGGACTTGTAGCTGCCACTTATTTACC
ATTTACATCCCTATTCCGAATCGCGTTGAGGTGTTCGCATTTCGTCCTAGGCAACAACGA
CATCGATGACTCCTCTTTCGGAGTATCGGCGAAGTCATCGGCCCGTCCCGCAGCTCCCCA
CTCCGCTCCCAATATCTTTCAAGTACGTTGCCCACCACCACCAATGTGGGATTCATCCGA
CAGGAAGTGGTACGCGGGCACCGCTGGGTTCTCGTGCCCGCGCCAACACCGACGCTTATG
AGGATGCGTGAGCGAGAGGCACGGATAGCCCACCACAAGCGGCAGCGGGTGAGGAAGAGG
GCGGCGACAGCAAGGCGCTAGCCGCGCGCTGGTGGATCCCAAGGCCGCGCTCCTCGCATT
GGTCCTTCATAGCTCTCTCATCACGACGGAGACGAGTGCGCGGCGTCTCCACCGCAAGAA
TGCCAAGGCGCTCTGACTCGCCTTTGAGTTGTCGGAGCGCGAGGCAACCAAGGAGGCGCG
CGACCAAGGTGGAGGCGGTCCACCATGAGAAGGAGCAGGACCGCCTGCTTCGTAGGCTCT
CATGCCAAACATGCCCCGATGACTCTGACCTGATGTGCGGCTCCACCTCCAGCTCTAAGG
ACAATGTGCCTATGTACATCGACGCCTACATGAAGGAGGGGCACGGTCGCGCCGGGACCG
CAACCACAAGGGGAAGGGCCCGGCAAGAAAATGGTTATTTCCCCCGCCCTTCCCTGTTTA
TCTATATTTTAAGTAGCTTGTAGTATGAGTTTGCACAGTCCACCTACGAATTATTGTCTG
GTATGTAACATTGCCTGGGTTGCATGGGTTTAAGATTTCACATATGAGAGAGGCTGTTGT
GAGAGCAAATATATGAGACATGCTCGGTATCTGCGGACAGACCCGACGCGTCTAAGGGGT
CATATTTGCTAATTAGGGCATCTTCAATAGTCGCATGATCATCGTCGGTAAAATTGCCAC
ATAGACGATTTTGATGACATGACACATAATAAAAGAAGAGAGAGAATGAAATCGTATGAA
CTTGAAGCAACGGTTGAGGCACAAGCTCCGAGGTAAACATAGTCATTTCTTCAACATTTA
GTGGACCCGCTTAGTTATTTTACATATAGTTAACATACACTCCATTGAAGAGCTTGTATG
ATGTGCTATTGACTGCTGACGTGGACATTTATACCAACGATTGAACATACAGACTGTTGG
AGATGCTCTTATGGTTGTAGATGCTCTTATTTCTCCAGCAGACGCCACCACCGCTTGTCA
TTTGGAGCAATCAACCAAAGAGTGGTGGATCAATATGGGCGGAACCAATGTGCCAAATAC
AAGTGCCATGGAATCTATACATATAGCCATGCCTGTAAGTTGGACCAACATTGTAGCAGC
ACGAAACATCCTTGTTCCCTTGTGTGGTTCAAGGACCGGTGAGCTGATTCTCGGCCTGCC
AGAAATAATACATATACGTAGAAACAAACAAGTATGTTTCCAAAAGAGCCACGCACATAC
ATACGCAGAGAAACGGCCGGACTAAGCGCACCAAAACGCTTTGCCGCGCCGTGTCCGACG
AAGCCGACGAATCAACAGGCACAGAAAAAATCACCGTTCCCCGTTCCACAGACCACAGAG
CGATCGGGTTCGGGACGCTTGCAATCATACTTAACAGCATCTCCAACAGTCTGTATGTTC
AATCGTTGATACAAGTGTCCACATCACCAACCAACAGCACATCATACAAGCTCTTCAATA
GAGTGTATGTTAACCGTATGTAAAATAACTAAGTGGGTCCATTAAATGTTGAAGAAATAA
CCATGTTTACCTCGGAGCTTGTGCATGAACCGTTGCTTTCGTTTCATTCTTTCTCTTTTT
TTATTATGTGTCATGTCATCAAAATCATCTATGTGACAATTTTATCAACGATGATCATAT
GATCATTGGAAATGCCCTTACAGGCAGAGGAGTTTGACATGTATCTCCGCGGCAAGACGG
CCACGTCCTTGTGATGATCGTGTTGACTTCTGAAAAAATATTACTGGCAGCATCCGGCAC
TTACTTATTCACCGCTAGCTAGCTTCTACTCACTGAGTTTAAAACTGCTGCAGGGGAAAT
AAATAATCTACGAAAGCAAAACTGCAGGAGAAATAAGTACTACGTATATATGTATGGACA
TAAGTCTAGCTAGTTACAGTTCATCTTCCTTCTTCTTCTGTTTCCGTAGCATGTCGATAA
CCTGGTCCAGGGGTGGGTCTCCGGGCCTCCGGAAGATCTGGTCCCCGACCTTGAACTCGT
ATGCCTCTGCCTGCCCCAAGATGAACTCCTTCAACTACACAAACACACACAAACACCAAC
TTAGAGGACGTCCCTCAGAAGCAACAAGAGAATGCATCCGTGCCCATGTTCGTTCGACAG
TAAATTCACGGGAATCACCGCAGGGCGATGAAGATGGGTGGCAGAGGCAATCCTCCATCA
CAAGCTGAAGCTCTCTTGGGCCTTCATTGCAAGACAATTTGTTTCCAAGAATAGAGTTGG
AGAGGGAGCCCTCTTTATCAAAAAAATAAAAAGATGTTTGTTTGACAGTAATTGATTCAG
GGTGCGAACATCAGATGCCCTGCTCTGGACAAAAAATGCAAGAATCCTCAGGGAATGGTT
GTGCTGATACACTGGTTATTCTTTTTCCGGTTACGAGATCGATTTCTGATTCATGATAAG
TCTCTGGTGGCAGGAGGAAGTTAACCCTGACAGAAAATGCAGAGCAAAAAAATGGGTGAT
GGAGGTGTGTGGATCCTCCTACCTCGCGCATGTCCCGCCCTCTCTCCATGGTGAACATGA
GCGTGCCGAAGTCGACGGCGACGAACTTGGCCGCCACCGACCCGGTCCGCAGCACGTTGC
TCCACCGCGTCGCGACCCCCGCCACCTCCTCCCGGGACCGCCGCACGCCGGGCCGGAGCT
TCACGAAGCCGAGCGAGGGCCCGCCGTGCCCGCGGAGGATCTCGGCCCGGAGCGCCGCGG
GGTCCATCCGCGACAGGTCCGGCGGCGGCCGCTCGGGGACGTCCCGCGCCCCGGAGCCGG
CGCCCCAATGCCGCCACTCCTCGTCCTCCTCGTCGTCCACCACGTCGCGGAGGTCGTCCG
GGATCGCCGCCCGCTTCGCCCCCAGCGCCGTCCCGCCGCACAGGAGGAGCAGGACGCCGG
CGAGGAGGACCAGCCTGCCCTGCCGCGCCATTCTCGCCGGCGCGCGCGTGGAAGACGCCC
GTGATGATGCGGTTTCGGCCAGTCTCCAAACGACTCGCGTGTGGCTAACCAACCAACCAA
CCAACCAACCGCTATAGGAACGACTTTTTCCTACCGAAACCACCCCCCCAAATACAGCAT
TTTCTCTTCAACATTTACATACATGTACTCCATGCATTTCAAAATGTTTGAACATTTTGA
GTTTAACACAGTTTATAGAAAGTTATATCAGCATCTACGACATCAATCAACCGTGTACAG
TATGAGCATGTATTTTATAGTGAATCTAATAAGACTTGATTGATGTTGTACACGTTGGTA
CATTTTTCTATAGAACTAGGACAAATCTAGAATTTCAAATATTTTGAAACGGATGGAGTA
CAGACTAACTACTTAAACCCCCAAACTGAAGAGGGAACCACATATTCATTTGCACAAACT
TATAGTGTTCATCCAGCTAGGCACGGTTTGGAGCGCAAGAATTTCACCCGAAAGTAGCTC
GGAAATCGATGAGAATTCTTGCTTTTCAACAGGGACCTTTAACAAACAATTTGTTTTCGA
TCGACACAGATCCATCTCAGAGGTAAATTTAAGTGCTGCTGCATATTAAACTGAGGCTGG
AGGTAACATTAGAAAACATTGACAGTGCACTTATTTACATGGCATTCAGACTTGGGCGTG
GACGGACTACATGCTGTTTAATTGCAGTTTGCTGCAAGAAAACATTGTGTGCGAATTGAG
CCGGAGAAACAGGTCCTGAATCGACTAGGGGTCTGCATGGCCCAGTATGGGCTCATCGTC
ACCGGAGTCATCGTCGTCTTCGCTCAGCTCTTCGTCGCTTGAATTATCCTCTGGAGTTAT
ACCCGCATCCTCCGGCTTGGCATATTTCTCACAGAATTCTGCAGAACCAGTAGCAATAGA
AGTCAGCTTTCAAGTACCAGGAAAGAGAGCACGATCCAACAAACATGCATATGGTTGTGA
AAACAGTATCGCCTGAGAAATTCTACACTCAGTATATCAGACAAAGTCTTTGTTAAATTT
GATTTAGGCATTTAGCTATATGGCTAAGAACCCCGTATTCAAATAAAGCAAGCGTCTCTA
ACTCATCCTAGAAGCACAAGCAGTATCAGCAAACACAAGTGCATTGGAAGATTTGGACAA
ACTGGCAGGTCTCTAACACAATACAACTACAGAATGTTTCTCATTTTCTCTGGAGGCCTT
CCATGATTACAATTACAAGTACTTATCGCATTATCTCATGATCCCACATCGAGGTTAAAA
CCTGTATTCTTTATTGTTTATTCAGGTTTCCGCATGTTTTCTACTACCAAACATGCCACA
AGTCCCTGTACAGACCATCACTTTTTCAACTTGACTAATAGGCAGAGCTCCTGCCAGTTG
CTCAGGAAAGAAAATGTACCTTCCCATCCCATGCTGACCAAACACCCCCTCCCCGAAATA
ATAGTCTAATTAGTTGATGTTGCGCGAGTTATATGCTGATATGCATCACCTTACACGCAC
AAAAAGTATGAGTAGAAGTTAGGATATTAGACTTGGGCCCAGATAAATAAGCAGCCAGGT
CCAATTTTATGTATGAATAGCAATTTCCCATAAACAAGTTTAAATTCCGATTTCAAGACG
GGCTAAAACCATACACAAATTATAACTACTAGCAAAAGGGCCCATGCGNNNNNNNGGGAG
AAAGAAATACCACACGCTCTTA