Contig Data
morexGenes
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Map Locations of contig_2550893 (5780 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_2550893

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38614 4 628 bp MLOC_38614.4 Available Available None





CDS Structure of MLOC_38614






Contig Sequence (5780 bp)

>contig_2550893 5780 assembly3_WGSMorex_rbca.fasta
CCGCCACCGTTCTCAGCCAGAGGCGACCGCCCCCGCCAAGGTTTGTTGCCGTGTTGCGCC
CGTCCGCCCCTCCCTAACCCCCCTGTCTAAACGCACACAAGCTGTTCGGCGCAATGCCAC
AGACAGATACAGATACATTTCGTTTCTTCACTTTCTTGATGTTTCAGACTCAGACAGATC
GATCGACCGGAGCCATGCCTCTCCCCGCCAACCGTGTAATGGGATCCGCCTTCGTCGCGT
TCGGCGTCACGCTCCTCGCCGGCTTCCTGTACGTCGCCGTCGGGTCCAAGGCCCTCGCGC
CGTCCGACAACTGGTTCTTGCTCGCCGTCCAAAACGACAGGTTAGCATTGGCGCGCGGCT
TCTTTCGTCTTGAGATTGCCGGCCTGCCTCATCTGCTGTTGTTCTCCAGGTACTACTGCT
TGCTTGTGCCCCTGACCGTCCCTGTCATAATCGTGGCTGTGTATCTGCATTGGCTGAGCA
TGAAGATGTTCAAGCATGCGTGAGGGGTGCTACAGTCATGCAAAACGAAACCCATCATCA
GTTCATCGCTCTTAAGATTGTGGTATTTTTGTTTTGTTTATTATACAGTGTAAGACAAAG
TTCCTGTGGTGGAGAAACTACGCTGGATCTTACAACTGTTGTGTAAGGATGTGCTTGGTT
TCTTGCCTCCCATTTGCCAATGACAGTGTTTTCGTGAGCCGATTTTTGGCATTGCCAAAT
TGTTTGGTTGATAGCCAATTATTGTGCCAATCAGGCTGGTTCCAATAGAGAGAAAGCATT
GAGTATGTTAGTATTCTTTTTATTAACTTAGTCCATAAACAAATCATTATGATAGCAATA
CCAGTATTAACCGCATGCCTTTTTTTTCTTTTTGAAATGGAGCAGAAGAACTGCCTCGTT
GATTAGTTCAGCATAAAAGAATTATGTAGTTAATTGATGAAAAGCCGGGCGAAAACATAT
ACAATCACACCACATGCGCATTGCTTACAAAGCATGAAACCCAACATGATCAATACGACA
AATATGGCCAACACGCAATGATCACAAATCCACATGCTTCTACATCGTAATGAAACCCTT
GGCAAGGTCATCTCGGATGAAGACAACAGACACCATCAAATCCACACAGACAAACCAATC
CATGATGACCAGAGAGACGTGGAATCATCAATTAAGCTGCAGCGGACACCTTTCCTATGC
CGTCACTCCTTTTCTTTGATCCTAAGAGCCTTCTCCACCTTCTTCATTTTGTCGTTGGTA
GTCTTCTCCGTGAGGAAGCAAAATCCGCCTTGCCAAATCCAGAGCTAGCCACCTCCAAGC
AACTGAGCAAGTCACAAAGCTCTTCCACGAAGAGAGCCTCTGAATCATATGCCAATGAAC
TTGCCTCATTAACCTCGTCGCACACGGACATCACCTGTCCAACAGTCACATGCAAGAGAG
TGTGAGGGTGTCTTGGACCAAGGAGTACTAACTCGAGGTGTTTGGCCCTTACTGGCCAAA
TTGGGGACCGTTAGGCCACCTCCTAAAGGACGATGGAAGGGTCAAGACTCGCTCGTATGA
ACAAGGAAACCTCCGAAGACTTGGCGTGTACCCTAAGGACATATCTATATTCGGCATGTG
TCCAACCGACTTAAACATGTAACCTAGCTCCCCCTGAGTACCTATATAAGCCAAGGGGTG
TAATCCGTAGGGGGACAACTTATTCGCCTTAGGGTTTAGAGCTTACACAACAATCTCGAG
GTAGATCATCATCCTGTACTCGGTACCCCATCATCAATACAATCAAAGCAGACGTTACCT
CTTCAATAGGGCCCGAACCTGGGTAAACCTCGTCTCCCTACTCTCATTATTACCATAGAT
CCTAAATCCACAACTCGGGACCCCCACCCGAGATCTGTCGGTTTTAGCACCGACATTGGT
GGCCCATGCAGGTCCGGTTGTGTGGTTGATCCGGATCAATGGCTCGCCTTCAGACTAACG
CTCACATCGGTTGTGGCGACATCTTTGCTCCGAGCCAGCTTTTCGAGTTTGGAAGCGTGG
TCCTCCACACATATTCAACCGACCATCTCGACGAGGTTGAGAGCTTCATACCCGATCAGG
TAGTCATGTTTGGAAGCTTGGAGTACACCATCGACGCCCGTGGTGATCTCACCCCCTTTG
GATGGACTCCGGATCATTTGGAGCGGTCGTAGGCTGTCGGGGCTTCAGCCCTAGAACCTA
CCGCTGATCATGCGACTGACAGCTCCAGAGATCTGGCCTTGAACGTGGATCAACCCTTCT
CCACCACGGATTGCGACCTTGACTCCAACCCAACTTCGGATCCCGCCTTGAGCCCGGATC
CGACCACCTCTCATGTCGTTCCCACGACTTCAGGGAACCTGCTCTAGGTCCGCTTGACTT
ACAGCCTGGCAATGTATACAACTAAGCTCTCGCTATTGAACGAGATGCTAGATCACATCT
AGAGCCTTGGGATCTCACACGACAAGACTTTGGTCTATGATTAGATCAGATGTAAAGTCG
ATAGCTGAGAATTTTAAAATCCATCCACCACCCACCTAGTCCCTACGGTCGAAGATTTAA
CCGACGTCCTCTAGTACGCATCAGAAGACGCCGAATTAGACGAAGACGTCGAGGATGAAC
CGGGCGCAATGAAGAGAAAGACCGGCAAGTGGGTAGAAACCTCCACTTATGACATCTACA
CGGTGGATACCCCCGGGACGATGCAGGAGGAGAAGACAGTCGCCCCTCCAGACACAGACG
GAGCGGGCGATGCGAGAGAATGCCTAGTAGAGGCGATATAGGCAATGGGAATGCTAGCAA
TGGCAACCCTGAAGATAACAGCACACCCAGGGTGTCGAGGAACAAGTCAGTGTCGAGGAG
GTCACGCCTGATCAAATCAACGGCACCAAGGAGCACACAATCTCCGACGACCCCGACGTC
AGTGATTACCCACCGAGAACTAAAGATGTAAGTATCGGGTCCGATGACCTCGCCGTCCCA
GAGAACTTTGCAGCCCTCGAGTCCTATCGAAGGCGTGTGATGGCAACCGCCTGCAGTGTC
AAACTAGGGCGAGCTATGCTAAAGGCCGACCAAGACACACTCAATGACAAGTGGGTCGAA
GTCTTGTCTGCAGAACAGAAGCGTGAGGATAGACTCAAAAGTCAACCTAAATCTTACCCT
CGGAGACACCTACTTTCAGAATTCGATGATGCAGTAGAGGACGACCCGCTGAGGAACTAC
GATTATCATGATCAACAGGACCGCCCTCCTAGGCGCGGGATAGGCCGCTAGGACGGCCCC
GAGAACTTCGTGCTAACGCTCGTTTTAACGATAGGAGAGCCAATCAACCGACACAGACGT
TTGACCTCCGTGAAAGGCTAGACATGGCGCCTCGATACATCTACCTATCAAGGGACCGGG
CACCCGGGGGATAGGAAGGATACCATGAATGGCTCGACAGAAGCACTTGGGCTCGGGTAG
ATAACTATGTTCGTCCAGAACCATATGGTCGGAAATCTATCGCCTGGGTCAAGGGTGCCG
CCCATCTGATGTGCTTCACTGACGATGTCATGCAACATCAATTCCCTGAAGGGCTTAAAC
TCGTCAATATTGAGTCGTATGATGGAACCACAGATCCCGCAGTATGGATCGAAGATTTCC
TTCTCCATATTCGCATGGCCAGAGAAGATGATCTCCACGCCATCAAGTACATATCCTTGA
AACTAAAGGGACATGTGAGGCATTGTCTTAATAGCTTGCCCGAGGACTCTATTGAGAGCT
GGGAGAGCTCGAGGATGCATTCCAAGCTAACTTCCACGGCACTTACGTCCGATCTCCGGA
TGTCTAAAACCCGAACCTTATCAAACAACACCCTCGAGAGTCAGCTCACAAATTGTGGAA
TAGGTTCCTTACTAAAATAACCAAATAATAGACTGTCCAAAGGCTTAGGCCATTGTAGCC
TTCCTAAACGGCATCCATGATGAGTGGCTTACTCGAGAGCCGAGTCAGGATAAGTCGAGG
ACCATGGCCTCGCTTACCTCTCTCATGATTCGATTCTGCACGGGAGAGGATACCTAGCTG
GCTCACAACATAACGAGAATGGTAAGCCTCTACGCAACATGACAATAAGCACTACCATAA
AAAGGTAACAACAACGACACTGACAACAGTTGGTGATGGATTTAGCAACCGATGCAGCGG
CCAGAAGAAGAAACCCTTTAAAGGGAAGAGGGATCGCCCGTGTGCCCTTGATTTGATCCT
CGATAGGCCATGCCAAATTCATGGCGCCTCGGATAAACCCGCTATGCACACCAATCAAAA
TTGTTGGGGTGATCAAAAGTGCGAGAAAAGACTCGGCTGAAAGCCCGAGCATGGGACAAC
CTTGTAGAGAGGATGAGGATGAACCACCTAGGCCTCGTAACGGAGGCCAAAAGCAATATG
TTACTCACATCCCCAAAAAGGAGAGGAAAGAGCACTTCGGGATGTCTACGCCTTAGAGCG
CATAGCACGGAAGTACAATCCATGGCCAGCTCACCCGATTACCTTCGATAGATGCAATCA
TCTGACCAGTATTCGGCATGAAGGGTCGTTCACCTTAGTCCTCGACCCGATAGTGGACGG
TTTCCACCTCACTAGAGTCCTTATGGACGAAGGCAGCAACCTAAACCTTATCTATGCCAA
TACATCCAGGAAGATGTGAATTGATCTGTCAAGGATCAAACTCAATAACACCACATTCAA
GGGTGTACTACCTAGTGTGGAGGCACGTTGCTTGGGAACTATCACCCTTGACATAGTCTT
CGGTTCCCCCAAAAATTTCTGGAGCGAGGACTTGATATTCGACATCATCTCGTTCTGTAG
TGGTTACCAAGTCTTTCTCGGACGAGTAGCCTTCACCAAATTCAATGCAGTCCCGCATTA
TGCATACCTGAAGCTCAAAATGTCGGGCCCAAAGGGTGTTATCACAAATAAATGGTAACA
CATAATGCTCCCTTCAAACATAGGAGCAGACCTCCACTTTCGTAGCCGAGGTCCAAGCAG
CTAAGGAAGCATCAAAATCCCTCACCAAGCTCAATACGAAGGTCACTTCAAAACGCACGT
GAGGTGCTTCGCGACCTCCTCACTTATCACACGGCCACCCCAAATAGGGACACACGCTCC
CTAGCCTCCCACTCCTAGCCGAAGATTATGTACCTAGAGTACATAACTTCGCCCTCAGAA
TTCCATGGAGGCCACAGAACACGTATAAATCATGCACAAGGATCGACTTAAACCGATCTA
GTGACTCGACCCTTAGGGGTATTGTGGTAATTTGAAAAACCATAGGAGCACATGCCCATG
TAACCTTCTGGCTTTCACCGAGCGAATACTAGGGGCTTCCTCTTTACAAGGCCCACCTCT
AAGCTATTGCCAAGTGCTCAGCTCATAGATAGTACCACACTCAAACATATAGGCACAGTG
CTTCCAACAAGCGTGGCTGGTTAATAGCACGAACATGTAGACATGCGACCGAGCCCATCC
AAGGACGGTAGGAAAGCTTTGCATAGAACTCCACCATATTTTTTATGCATCTTTTGTGTG
ACAAGCTCAGCTTGCACGGTTCGTGAAAGGACGTGGATGTCGCCTAGAGGGGGGGTGTGA
ATATGCATTTTAGAAGAATTATGGTTTAGGCTTGAACAAATGCGGAATAAAACTAACGTT
TAATGTGTCAAGCACAAAACCTAAAANAACTAGGCTCACCTATGTGCACCTACAACTTAT
TCTAAGCAAGATAAACAACT