Contig Data
morexGenes
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Map Locations of contig_2550876 (3214 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2550876

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38606 10 1739 bp MLOC_38606.10 Available Available LOC_Os08g37940.1, FRAME:+2, EVALUE:2e-41, 13108.m04009 protein HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed





CDS Structure of MLOC_38606






Contig Sequence (3214 bp)

>contig_2550876 3214 assembly3_WGSMorex_rbca.fasta
CCGCCTCCGCCTCCCCCTCCCGCGTACGTCCTCGCTCGTCGCCTCCGCCTCGGCTTCCCC
GCCGCGGTCGCTCGACGCCCTCATCTTCGACTGCGACGGCGTCATACTGGAGTCGGAGCA
CCTCCACCGGCAGGCCTACAACGACGCCTTCGCGCACTTCGGGGTACGCTGCCCGCCGGC
GGCCGACGCGCCGCTGTACTGGGACGAGGCATTCTACGACGACCTCCAGAACCGCATCGG
CGGCGGGAAGCCCAAGATGCGATGGTACGTGACGCCCGCTAGCGAGCTTGAGGCTTCTTT
CCTTTGTGCCTTTGCTCAATTGCGCGGCTGTAAAGCACAGTCAACAACTTCTCTGTGCTT
GATTGCTTGATGTTTTGAGTAACTGCGCCGGGATTGGGTTTGCGATCAGACTCCCGCCAT
TTGTTACTGGCATTTCGATGCACGTATGCCGCTTTCAGAATCTTGATTCTTGCTTACCTG
CATTGTAAATATGCATGGGCGTGCTAGGATGTTCCTGCAATGCAGGGCACGCAACTTTGT
ATGCAGGGGTAGGATTTTTTATTATTATTATTGTTTTAGACAAGGAGGGATACCTCCGGC
TTCTGCAGGGGTAGGATGATGCAGTCATTAGATTAGTGTGCAAAGTTTAATGTGGCAACT
GATAAGTAGAGTAGTTACCATTCAAAAGAAAATGTGGCAAGTACTTCGAACTGGAATAAC
TGATGTTGCAGGGCAGGGCATTCTAGGGTCCACATGCTGTCTAGTGTTTAAGTTCTTGAT
TTGCGTGTGGATGTTGGTTCTGAATTGGTTTGAACCTGCTACAGGTACTTTGGAGAAAAT
GGGTGGCCTTCTTCAAAGATATTGGAGACAGCACCTTCAAGCGACGCAGACAGGGAGAAG
TTAATTGACGTTATTCAGGTCAGATCCTTGGTTGTAAATCAAGTGCATTAGCTTCCTATT
ATTTAGCGGATCTCCATGTAGAATTTAAAAAATATAGCATCGACTGAGACTTCGTTAACT
CTTAGTTGACTGAGATTTAGCAATCCCGTATTATTTTTTATGTCCTTCAGCATTTTTTTA
ATCCTTTTTCAAGAAGTACAAATGCTTCGAACCATGTTTAAGAATCCATGAATTTTACAC
AAGTACTTTTTTGCAGGACTGGAAAACAGAGAGGTATAAGGCAATAATCAAATCTGGAAC
TGTAAGTGAAGTGTATACGTTGAGAGATTCTTACTCATCATCTCATACTGATGTTCAGCT
TTGTATGCTAGGTGGAGCCTAGACCTGGTGTTTTGCGGCTGATGGATGAAGTTAAGGGTG
CGGTAATACTTATTGCAAGATCTATTCTGCTTTGTGCTAGTGTTTTCCTCATGCAGTAAA
CTGCTTTGCAACATAATATATTGCATTTATTCCTTTTTGTAGTGTACACTTAGTGAACTC
TTACTTAATGTTCCCATTAAATTACAATATTATGGGGCGTATTTTAAAATATGAGATGAC
TTTGGTAAATGGTTTAGGGCATCAAGCTTGCTGTTTGCTCTGCAGCAACTAAAAGTTCAG
TGGTGTTGTGCCTTGAAAATCTTCTTGGACTTGTAAGTTGCATTTGACTTATGTTGTGTT
TCTTATATTTCTGACATGAATTTTATTTCTCGGTTGAGATTCCATTTCTTTGCAATTGTA
TGGTTTTATAGGAAAGATTCAATGGTCTGGACTGCTTCCTCGCCGGTATAGTTCTGGTTG
TTTTTGCTTCTTTCTGAACATGTTTACGATGGTTGTTTTGATGTTAATTGGCAACGATCA
CCAAAATGTGAATCCGTGTGCAGGAATGTCTTTCCGTACCAGTCATCTTAGGTGTTTTCT
AGTTTTATAATTTTGCATTAGTTCAAAGAAAATATTACAATGGCTAGTGAGAAGGTCAAG
AAAAAGAAGAAATCAGTGAAATGAATAATATAAAGTCAGGTAACAGGTCGAGATGTGTTT
TAGCTTATATTTTTCACTGGGCTAAGGCCAGAACCTATTTAAATGCACTTGCAATTATTC
GTTGTTTGGTAGGTGGTTATATTCTGAAAGCTGTAATAAGACATTCCACAGCATTCAAAT
TCTTGATCGTTTCATGTTGCAGGCGATGATGTTAAACTGAAAAAACCCGATCCATCGATA
TATATTACAGCAGCAAAGGTAGTGATCACAATTTGAGCAGATCATGTCGAACTTCACTTG
AGATTATCCTTTTCGAAATTGGTCGTGTTAAAGACTTAATTGTTCGATGCAGAAACTAGG
AATAGAAAGCAAGAACTGCCTTGTGGTAGAAGACAGTGTCATTGGACTACAAGTAGGTCT
TCTAAGTTTTTATTTAATTAAATAAACTTATACGTACTTTTTAACACAAGAGATGCCTTT
CTTTTGACAGGCAGCAAAAGGAGCAGGGATGTCATGTATAATAACATACACACCTTCAAC
TTCGAACCAAGTAAGATCGAGCCTAGCTACAAATTATTGTTCAGTGTAACAGTACACATG
CTGATCTCCTAACTTGTCTGTAGGATTTCAAGGATGCAATTGCAACCTACCCTGATCTCA
GTAACGTGAGGTATGTAATGACTTGTCCATTTCAGTTTGTTTCATCTGGTAAACCATACC
TGTTAATTCTTTACAGGCTTGAGGACCTGAAGCTACTGCTCCAAGAATCCCTCGTCACTG
GATAGTGGAATTCAGCCTTTTTCGGTTGCTGGCGATCCTACCCCCTAGCCCTAGGGGGTT
CAATCCACCCAGGGGTTGGATGATCCCCACCTCTCACCCGATCCCCACTAATTCCTTCAC
CACCAGAATCCCTAAACTAAATCACTGCTCGGTTAAACCTCTTGTCGAAATTTGAATTGT
GCATTGCTGTTACAGTGTGGTGGCAACAGTGAAACATTTGGAGTTACAACAACGACATGC
CAAACTGAATTTACAGTTTTTTTTTTTGAAAGATCCAGCTGCTGGCTGGCATATATTTAG
ATAGCAGGAAGCATGACGGGAATACAAGAGGGTGGGGTTGATCAAAAGATCAAAAGGACA
TAACAGGAAGAAAACCGCGGAAAAAATTGTGAAAGCCAAGATAGCCTGGCACAGACGCCG
TACTCCTCACGTAATTTTCCCAAACGGGTGCTCTAGGAAAACTGCTCCTGCTTGCCTCCA
AGACTGGAGAGTTGTAGAGATGGAGGTGGATATG