Map Locations of contig_2550850 (5662 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2550850

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38596 2 1301 bp AK248911.1 Available Available None





CDS Structure of MLOC_38596






Contig Sequence (5662 bp)

>contig_2550850 5662 assembly3_WGSMorex_rbca.fasta
CTATACTTGTGGGTCATCACTACTTCTGCTATATGGCTTGCTCCTTCATTGTTCTCTTGC
TTGTTGCTTCAAGTGCTCCTCTTCTGCACTGCTAGGACAAATGGTATGCAGTGTTCATCG
GAAAGGTACCTAGGGTTTACAGTTTGTGGGAAGATTATAGTGAACAAGTTGACTTTGTCA
ACATCGGCAGCCATAGAGGGCTTAAGACTAGGCGGGCGGCAGAAGAAGCTTACACCAACT
ATGTGCGAAAGCACACAGTTGGCGTGGTTGAAGTTGGCAACATTGTAATTGGCAAGGCGG
GGTCACGCCTTGCGGTGAAGAACTTCATCATCGTCGTGCAGTTCGTCGCCATTGCTCTAC
TATGGCGTTGATGTGTTAAATGTGGTCATGTGTGAGGTAACCTCATCACATAGGATACAA
GGTTAGGACACCTCACACTGTGTATGCAACCAAACAACGTGCTTACATGTGAGTTCGGAC
AATGCAGGCAACCAAACACCGTGTGTTAAGTTGTCCCCTAATGCATGAGGACTAAATACG
GACAACCAAACAAATTACAGATGTTGGTTTAGAGGTTGTATTTCCTCAAACAGCCTCATG
TGAGACAGCCTTCAGCTAGCCAGGGTCGGCTGCTACGGCTACCAAACGCTCCCTAAAAAA
ATACAGTGGATGCGTGAAAACAGAATATCTTGATCAATTGAATTTTTCTTCATAAAAATT
CAGCGCTGCCAGTTAGTTAGCTCCTTTTCGCACGTCACTAGAATCTTCAAACTAGCGTGT
GCCAATTTTATTTTATTTATCTACTGCCTGTTTCCTCCATCCCATAATATAAAAATATTT
TTCAACATTCTTATATTATGAGACGGAGGGACTACTTATCTAGTAGTTAAAACATCAAAT
GTTATATGTTTCATCAGAAACCAACTAATATGGAAAAGTTTCTTGAAAAGGAGGATCAAG
CGATACATACAGTCATCTTTATTGTACTCCCTTCGTCCGGAAATACTTGTCCTAAAAATA
AATGAATCTAGACTTATTTTAGTTATAGATACATCCATTATATCCATTTTTAGGATAAGT
ATTTCCGGACGAAGGGAGTATTATTCAACAACGTCAAAAGGAAAATACTACTAATATTCT
AGGCTGCTTCATTATTTTATTAAGACGCAGATTAGGTAGATCTCGAGAATGATTTGGAGC
CGACAAGGACCAGATTTGGTGACCTAAGTGTGCTTCGCCATTAGCTTAGAGAAGACTCAA
ATGTCTAGGAGGCATCACCGATTACATGATGCTCCCTGATCTGGCACTATTCGTTTATGT
TTGTCTGTACAAAGTCAGTGCCTACAAACACAATCAATGAACAGTGGAGCAGAAAGGGAT
ATGAGCCCATGGCGGCCATGAAAGGGCAAGATTTGCTCTTCAAGATTAGCAAAATGCACC
TTTCACGAGGGAGGAAGAAGAGAAAAAAGTCCATCAATGTTTTAGTTTGGTGGTATACTT
GCTGAAGATGTTAGAGCTGACTCACGGCAATTTTGAAGAACACTTGAAATTTGTTATTTG
TAAAAATTCCAGTATTCCGAACATGGCCTAAATTTAACCGATCCTTGCAGGTTACAAGAC
GCCATGAACTGATCAAGGATGAAAATCGTATGTGCTCTAATGGCCTAGAGCTACTCCTTC
TGTCCAAAATACTTGAAAGTTTGAGGTTTGCCCTCAAGTAAAATCTTTTTAAGTTTGACA
AAATTTATGGATAAGTACACCAATATTTACAACACCAAAATAGCTTCATTGCTTCAGCCA
TCTGTACTGTCATCGGAGCCAGAGACTGGTCGCCGCAGATCTCGGACTGAACCAAACAGG
TACCGGGGCAGCACACGTGACGATCGAGTTTACGCGCCAAATTATCACCAGATGATTTGG
GTGCAACACTGGGTTATTTTCCTTTCCATCAATTTATTCTCTTGGATGAATGGTCAGCTC
ATTATTACAGACATGACGCCACGCGCACCAATCCTGAATCCATATTTGTAGAGGTAATCT
CTTTTCAGAATTTTAAGCCCTTTGCACTTCATCATCAGACGTGCAGTTCATCCCGAGAAC
AGCCAAAATTAAATTAGCGAGTGTACATACATTATGCCTGTGGTAGCAACATAAATAAAC
CCTGAGAACAACAGGTAGCAACATAAATAAACCCTGAGAACAACAGGACGGCAACGGCAA
GCCATTTCGCACTCCAAGCGCAAGTAGCAACAGAGATGTAGCAGGAGACCGTCCATCTGT
TTCCTCCTATCACAGCATCAGGCGGGGGCGCATCCAGTTTTTGATCTTGCAAGAACACTA
CGACCTTGACAGAACACCTTTGGAGCTGCGATTGGGTGCAAGATACACTCAGGAATGCCA
GCTAATGTATGATAAATCACTAGAGATTATATATGCTTCTAAGGTCCTTGTCACCAGTAA
TCATCCAACAGCTAAGTGCTTCTGTTTTTTAAAGAATTTTGTGGCAGGAAATAGTTTCTG
AAACATCTATGATATAGTTTCAAAAACACCTATAACCATATGCACTGTACAAAGTTTCCT
GAACAAACAATATTTGCAGTGACTGAGGACAGACCTGGGAACAGTGCCACGTCGGCGCAA
GTCGTATTCTGTTGCTTGCCGAAGGGCCCTAGCAAATGCTTTGAAACATGCCTCGATAAT
ATGGTGTGAGTTGTTCCCCGCGAGCTTTTTGGAAGGAAAAAAAAATAGAGCCCAGGGTTA
GGCCAATTTAACTCACTTCATCTTGGGAAGTGGGTGCGGGCATCGTAGAGGAAAGCCATC
ACATTATTGACCCCGCTATGGGAGAGGATTTCACTCGAAACGGATGCAATATATACCTGA
CGGATGTGAAGCGTCATCCCAGATGTATTCACAAGAGACTGGAAGAAGTGCTCAACGAGC
TGCCACAAAGAACATTTATTATTTGCCTAAGTTCGAACCAGGAATGTACGGTTACCAAGA
TCTCATCACACTAGCTAACAAACGACAAATATGTCTTGTTAAGATTTGTTAACAGCTAAA
AAACGACAAATATGTCTTGTTAAGATTTGTCAACAATTATTCACTGGAGAGAGAGGAAGA
GTTGAATGTAACAAAATTGGGGGGATAAACTTGAACTGAATATGTCAGATCTGACAATGA
AACTATTTCTTAAGTCCGACATGCAGAAACAGAACATCAAAGGCTTTTGGAATCAACGTT
GCAGAAAACTGAAAACAGCTGCGAAATTTCACTAATTACCTGTGTATCATATGTGCCAAC
CCGTGCAGTAGGAATACTTAAGCCGCAGCTCAAATGAGGTCGACCAGATAGATCCTGGAT
ACAAGGGGGAAAGAATGACCGACGAGCATATATGCTCAACAAGGCACAACTTAATTGATT
AGTAGAGATTTACATATTCACTGCAACAACAATTGATAAGTGATAGCATCACCATTATGG
AACAAAAATTAGGAAACCAAGATATGAAGTAAAATAACTGCAACTCTTCATTTTGTGTGA
GATAGATGAGTCTGAAAAAACTATAGCAAAAAAAGGACTACCATTCTCAGTACTAGTCTT
CACAAGCCAAAGGCTGCATATGGACTAACCTATCATAACAGCAGATGCTTCATGGAAACA
GAAGAGAGGAAAACAGTTTCATGATTAGTAATTCCCTAAGTGCAGAACCAGACAAGACCA
ATCATAACAGCAGATGCTTCATGAAAACAGGAGAGAGAAAATTAATTTCATGATTGGTAA
TTCCCTAAGTGCAGAACCAGACAAGTGCAAGTTATAAGTAAGTCATGTGTTAGCACAGGA
CAAAAGACCGATGACCGATGAGCTCATAAATGCCAACATAGACAAGCACCCTCGCCAATG
CGGGTTACAGAGAAATGTACATTCATAGTATGTACACACAACATAGTTATGCATACCAGT
ATAACCTCAACTGCTGCCTCATCAAGTGGTGCCGTAAAATGCCCAAATCGGTTGATTCCT
TTTCGATCTCCAAGTGCTTGAAGTAACGCCTGAAAGTACAATAAAAAACAGTCATCCCAG
CAAACTTTCGTCTATAAAGGTTGCAGAATACTAAATTAGGATAGTTCATTGTGAGGTAAA
CATAGTGTGCAAATTAGTAATGAGATCAAAATGGATATCCTAACTTCTGGTAAGCAACAA
TTCATATAACTACTGCAGAAGTACAAATGCCAAGTTAAATATTAATAATACGATAGGAAA
TCAACAATCACCGTTCCAATTGCTAAAGCAATATCTTCATTCGAGTGATGATCATCAATG
TGAGTGTCACCCGTCGCCTTCACATGTATGTCAAACAGTCCATGAGAAGCCAGTTGCTGT
AAGTTGTAAACTGAAGTTAATGCCTAACTTTGACCAGAAAAAAAAAAGCACACTGGCGCA
GCAACAGTTAGAAGAAATTTCTACTGCCAAGCACAAGATATACATAGAACATAATACTGG
ACCATTCAACATACAGCAACCTGTGCAGAAGAGGTACTTCTAAAAAAAATGCATTTGTTT
TGGCTACTTCTGCACTTGATTTTAGTTTCTTTTCATATATTGATTTGACATGTAATGGCT
TGTCACACATACCGGCCATTGTTGTGAGTTTTGAACTAATGTGGAATAACAAAAGCCATA
TATTTCACATATACCAATAGTTAATAAGAGGGAGAGGGGTAACAACCTTTCCATGTGTCA
TCCTGATTGTCAAATATCACAGTTAAAAATACCAATAGTATCACACTAGCGAAAGGAAAA
TCAAATAGCATCTCCCATCCTGATTGTCAAATATCACCGAAAACATGTGTAACTCAAAAG
GCAGCATACTTCAGGCTTAGTTGTGTATGCATCAATTTCTACAAAAAACAACAGGTTTGT
ACCAACGGTGTCTTGGAGCATCTCCAACAAGTCCCATAAAAAACTCCCCCTAAAAGAGGT
TTTACAAGGTGTCCATATAATTGAGGGGAGGTTCACATGTGAGGTGCATTAGCAGGTCCC
GTAAACATCTTCCCCTAAAACCAGTTTTTTCCTATATCACTATAAACTAATATACAAATG
GCATATGTAGGGCTGAAAACAGAGAGAATACAAGCAGAGGGTTGTGAAACCATATCCGCG
AGCATATTTTTCTCGGATTTGGAGACAGAGTGGATAGTGCCAGGATACGAATACATAATC
GGAGCCTACGGGTACGAATACGGAGCAAATACCAGACGAATACGATTTGGTCACGGACAT
TTTGTTGGATGTATGTCGTGTTGGAACAGCCGACAGGATAACAGACTGCAAAACAAATTA
TTCATAAGCTGCTACTAGTTTAATTTTGTCCGTGAACAACATCTTGGTGCCAGTGACGGA
TGCGATTCACAAACTGGCTAGTGCCCCTATGAGGATCAGCTCAAGCTCAACCGTACTCAG
TCTTCTTTCAAATATTTCTCCAACTTACAACAACAACAACAACAANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGAGGTGAAACTCATAAGATCTCGCGAGCAACTCATGGTT
CTGGCACATGGATAGCAAGCTTCCACGCACCCCTGTCCATGGCTACTTCTTTGGTGATGC
TCCAATCCTTCAGATCTCTCTT