Contig Data
morexGenes
Links



Map Locations of contig_2550820 (4733 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2550820

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38580 5 1474 bp MLOC_38580.2 Available Available None





CDS Structure of MLOC_38580






Contig Sequence (4733 bp)

>contig_2550820 4733 assembly3_WGSMorex_rbca.fasta
GGAACGATACGGCCGACGCGCCCGGTGGAAGCATTTACCAAATTTGTAAGGGGCGCGGCC
AACCTTCCAAAATTTGTAAGGGCCGCGGTAAATATTTTAGCCGGGCGTGTTCCCCACTTC
CATCCTGCCCGTTCGTTGCGTTTGATTCTAGCCATATCTGTAGACACAATCACGTTGTAG
GGCCGCTTCAGACCTAGGTACGCCGTGTCGCTTCGCCCCCACCCCCACGCGGATCCGCCC
AGCCGAGTTGCCTCGGGTCGTCGCCCCTTGGATCAACCGTCGATGAGTCGCCGCCGCCCC
AAACCGAGAGCCGCCAATGTGTCATTTATTCCTCCTTTCTAGTTAATGATTTGTAGATGA
ATTTTCATTCGTGCGAGATCGAGTGCGATTTTAGATGGATTCGTTTCTCTCCCCCCTCCC
TCTCACGGATCCGCCGAGCCGAGTTGCCTTCGGGTCGTCGCCCCCCTGGATCAACCGTCG
ACGAGTCGTCGCTTGCCCTGTATTCGTCCAGCCGAGCCGCCCCAAATCGATCCCCGCGGG
TGTGTCCTTTTTTGCCCCCTTTTAGTTCGACTTAGCGAACAATTTGTAGATGAATTTCCG
TTCATGCGAAATCGGGTGAGTTATGTAGATGGATTCGCTTCGCCCCCCTCCTCCCTCACG
GATCTGCCCAGCCGAGTTGTCCCCGGGTCGTCGCTCCCTAGATCAACCGCCGACGAGTCG
CCGCTCACCCCGGATTCGTCCAACTGAGCCATCTGTGGGTCACCGTCGCCCCAAATCAAC
CGCCGCCAGTGTGTCCTTTTTTGCCCCCTTCTAGTTTGACTTAGCGAAGAATTTGTAGAT
GAATTTCCGTTCATCCGAGATCGGGTGCCATTTGTAGATGGATTTGAGCCCTTGCGGAGA
ATTTTTGCCCGACAATTCGTCCTTGTATCATAGCTGTATCTGGAACAATTCTTGTATTGA
ATTATTAGTTTAATTCAGTGATTTAAATAATTATTATAATTTGGGTGATTGTTATATTAT
AATATACTACATTTATACTTATGTTGAATTCATAATTCTATGTAATATGTGATACATGTG
TCAAATTCAGAAATACCACATGCTTTGTGAGCTGGCGGGTGCTGCGGCCGAACATACCCC
GCATAATGGAACTATAAAACAGACCACGAACTTGGCGGGGTCTGTTCTGCAAAACATTTT
TTTGCGAACTGTAAACTTACTACGAGGAAAGGGGTATGCTAGAGATGCTTTAACAAGCCT
TGACCTTTGCAGATTCCATCTGTTGTTTTTGTTTAGCTCCTGCTAGTGACGTTATCAGTT
TACTTCGCAGCATTTGTGTTTGGCACTATGGTCTGAATACATAAGAATCGTTTTGTACAA
TGGGAGGGGTGATGACTGCGGCTGGTGGTGAACTACTGCTTGCTGGTAGATCTTGGGCTG
CGGAGAAGATCGAGGGGGTGGATCGAGGGAGGCTGAGATGGAGGTGACCTGGGGAAGACG
GGTAGTGGTGGGAGGCGGACCTGAGAAATTCGAGGGAGGGGAGATTTCCTGTGAGAAAAT
TGGGTGTGGCTGGAGGAGAGAAATTAGATCTTAACCCACACTTTACTTTTCACTTTGATC
ATTTGCCCCTTCCCCCGAGATTGACGGGTGGGGCCGAGTCCACTTGCCATTCACACAATC
CTGAGACAAATCATCAAACCCCTGCTAAAGTGTGCTAAATCATCTAATCCCCCGGCTGGA
GGAGGCAGAGGAGAACGAAGGTGGGGGAAGTGGCCCAGATTTTTTGGCCGACTCTTTCAG
GATTTTGAAAATCGACTCTTCACACAATTTCTCTCAGAATCTTGTATCCTTAGTTTTTTA
CAATCCTAGCTGTTCACATCCTAACTAGATATGATTGTAAAAAAAATATGAATTCAAGGT
TTTGAAAGAAGCCGGATGAAGTGTCGATTCTCAAGACTATGGAATAATCGGCTAAAAGAA
CTGAACCTATATCTGTTACCCGGCGGCCGGCCTTAATAGATGTTTACAGAACCACTAAAC
AAACCCCTGTAAACATCAACAGAAAGGTGGGGTAAATGTTCTTCAAACGGTCACTACACA
CTGTTTGGGACTTGTATTGCAGATTGTGCTGTGCCGGAAGGAAATGATCCAGCTTACAGA
CTTGAATTTAACTACAAACCGTGACTGTTTTTAGAAACAAGTACAACATGCGGGCATCTG
GCTTTCAACTGAGCCCAGTCCCTCATGGGATACAACCACCTCTAGAAAAATGGGCAACAT
AGAATGGAAACATTTATATTTAGTCATGTATTTATTTAGCATTCCAAAATCGGAATGTTT
TGGGATGTTACAGACAGCTCTGCCGCAGGATCTTATTACCTTTTTGCTTGACATCCTGAA
GCATCATCAACAGTGTTTCTTGCAGAGACAGAATCGGTAATCATCAAGTTCAAACTCACT
CGCTTTACACTCCCCTTCAACGAAGCCCTCGTCGTGGCAGTGCTCGGCACATGGTCCGCT
CGTGCATTCAGAAACGGTGTAGGTTTCGCTATACTCCTTGCAAATTTTGCCTTCGGATCC
TGCAATTGCAATAGAACATGGATAACGTTTGGGCAACAACCTCACAACATACAACACCAG
CAATCTGTTATACTGCTCAGGTAACTATTTCGGGCAAGGCTTACCGGGAAGCAACAACAG
AGCCGCCATGAGCAACACCAAGCACAAGCCACGCATCTTCACCTTGTGGACGTCCATGCG
TCCAGGGATGAACACCCAAGGAGAGAAGGAAGGGATCCAAATAGGTGAAGCTAGTAGTGT
CATCGGTCCCTTCTTATAGATATGATGATGAAACCTTGCAGTAGACCAGAATTTTTTGTA
TTTTAGTGGACGATGCAGTCGCGTGTATATCTTGATGATGTAGTGATGTGTTTGTACACT
GGAAAAAAGGACGCTTTGAGACGTGATAAAGAACGCCAGAGGTTGTTGGAAAGTGCGTGC
GTTGTTGCTACGAGACATGTTATGATGCTTGCACCGCTCAAAATGGTGTCTTGTTGCTTA
GGCGAAACCATACAAAAAGCCAAGCATAAAATGTCCTATTTATCTAGATGTGCACCTGTA
TATAACCAAATAATGCAAATGATGTGCTTTATATGAAAGAAGACACCTGGAGACATGAAG
GCGTCCTAGGTTGGTGAATGGTGACACACATGCGTGTTATTGGTGTGAGGAATGACATAG
TTTATATACCGCTCAAATTGGTTCCCTTGTTGCTTAGACGAAACCTAATGTGCCGGGATC
ACTAAATCAGAGGATGAATTGCTCAATTATTGTGTTTATTTAATTAATTTCCCTAATTTT
GCATTCGTATTGTAGGATTGCATAGGGATAGAAGCATAAACTTGTTGGAAGCTATACCTA
ATAGTATTCGTGAAGAAAAGCAATTATGTTGATAAAGACAAAGTAAAGAAAAAACACTAG
TGGAATTGGAAGACAACTGGAGCCAGGGACACAAGGGGTCGACTAGAGGTGTCTAGAGAC
CTTAGATGGAGGCCCATTCGGCCTAGGCTTAGGGCGTGTGGCCAGTCCATTTAGGGTCCT
TAAGGACATCTTCTGCCTCCCCTTTGGTTATCTTATCCTCATCATTATTTCTATAGAGAC
ACCCTGGTTTCCTTGATTTTTCGTGACGGTGAAAAACAGAGGACCTTAGTTCCTCTTTTT
GGAGAGCCAATCCTGTCAAATCCGCCTTCTGTGATACGGGAAATTTACTTTCATCATCGT
CACTAACAGTTGTGGGGACCATCTCTATCCAAACAATATTGACCTATAACACCTTCTCCT
TCATCTTCACCTTCATGAATGGAATATCTAGTTTCTTTTTTGGATGCTCGGATTCTTGAT
ATTCATCCTTTTATTTCACCTTTATAATTATTTGCTACCCAATAAATTTTTAGCATCCAG
TTACATGAGTTTTGTATGCAGATATACCATAGGCAAAGTGCTTGTCTTTTATGGCATGTG
TGTGCACTATGCAATATGCAACATCACATTGAATTTTATGTTTTTTTCTTTGGCTGTTGG
CATTATTTCTTGGCCTCTACATAACTGAATGCTTGAATGTGCGATAGTCCTGAGAGTAGT
TGAACTATATTGAAATTCTTGGCCTCTATATAATCGAAGAGGTGGTGAAGACGCGTGGGA
GCACACGGAGGCACACGACAACGGGCGCGCGTGTGGCTCGCGGAGGCGCGAGAATAGGCG
CGGCGAGCTGGCGACGGGCGTGCGGGGGCGCTCGTCTGCAGGGGAGCGGAGGTCGTGACT
TGGCACGAGGGCCACATCCGAAGGGGTTGCGTGTACATGGTGCTTAGGCACCGCTCCCGT
GCGGACATGTGGCATGCCGGTCGTGGGAAGCGTGCATGAAGCTTCCTGGGTATACCAAGA
ACGGAGATTAGCCGTCTCCAAGACAATTGGGGTCGACTGGCCCCACAGGTCGGCTGGCGA
TAGCCGGCCCATTCGGCCAACTCAAGGAAGGCCGGCCGGCTGGCGATAGCCGGCCCCCTT
CAACCAACCTGTAACGACCAAGATGCGGNNCTTTCCGATCTGGGGGTCGAGGCCTCCGAA
TAGGAAAGAAGCGCATCTNNNNNNNNNNCAAGCAAGTAACATAGCACAAATAAATATAAA
AGTAGACAATTCGGGATTCAACTGTCTTCTTATTAAACTCAGAGTACAACACA