Map Locations of contig_2550790 (3155 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_2550790

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38571 1 2310 bp MLOC_38571.1 Available Available LOC_Os03g51520.2, FRAME:-1, EVALUE:5e-77, 13103.m05607 protein fip1 motif family protein, expressed





CDS Structure of MLOC_38571






Contig Sequence (3155 bp)

>contig_2550790 3155 assembly3_WGSMorex_rbca.fasta
TAAGAGGCTTTTGGGATTGACGTGATCGGATAGAGTTGGTTATACTTATATTAGCAAACT
CAATGTTAATAATTTAAAGCGGGTGGATACAAGTTATTCTTCTAAGAAAGAAAGACAATT
TTGGGATGTTCGACACCCTTCAAATGGGGTGCATCAGGCACGTCTTTCACATTAGCCCAA
ATCTCACCCAATCCATCTAGGCCCAACCTACAACCACATTTCATTTTTCTCTCTCGTCCC
TCTCTTTCGTTTTGGACGAAGCCCGCACCTGCGGCCTCCGCCTCTCGCCCTTGTCACCTC
AAACAAAACTCATCACCGCTCGTGCCATTGGATTTTGCGCCCCCACACCCACCCTCATGC
CATCGGGTCCCTGGACACCGTGTGCAGTCGCCGCTAGCCGCTAGCCTCTCTCTGTTTGTA
TCAAAGTTTGATCAAAAATATAAATTACATGTCATAAAAGTTATACCATGCAAAACCTCT
TTCAAATACAAGTCCGATACTATACTTGTTGTAGCATGTATCTCATATTTTGTTAGACAC
ATAAGTCATCCTAAAATTTAAAGAAGTCCAATGAATCCAGACGGATGGAGTACACGGGAA
GGAGTAGAAAATGAAGGTAGCCAAATAATTTGTGGTGGGTGAAGCGCGTGGAGACTCCCC
AGGGGCACGGCGATGCTGACCTCCCACGGTAGCGAAAATGAAGGTAGCCAAGTTACTTGT
GGTCCGACGGGGAGCCTGCCGGTGCCGCTAATACAAAACGGATGGCTGTGCTGTTGGGAT
CAGCTCGCGACAGGGAGAAATTTCGCCATACTTCGCTAGTTCGATTTCAGTATGATATTC
ATTTATTTATTTTTGAAACGAGTACACAAATTTTCACCTTCCAACAGATATGTAACTTCA
AGTGCCAACTAAAATTCAATCAGTCGATAAGACTGGCATCTTAAAGTCAGTTTGTTCATA
GGCAAAATTCCAGATGGCCTAGTTACATGTACATCGCTAAAAAATAAAAAGAAGGTAAAC
AAGCATATTCACCTTTTTTACCTACGACTGTCTACATGTATATATATTATATCGCATGCA
TTGTCCATGACATTCACTGCAACATGGACTTCTACTCTAGAAGCTATCTTTGTTGCATCC
TATGCACACCAGTCCAGGAGATTTATCATAATGTACATACACGTAATAATATTAAACATA
CACAGCAGAGGTCATAACTCCAATAGCACTCCTCGGGTCTCCAGCTCTTCTTGATCGCAG
GGCAATCACAAAAGCTTTCAAGTAACACCAGTAGAAGAGTGATGCAAAATCCAGTGTTTT
CAGGCCAATGGCGGCTCATAAGAAGGCGCCTTGCAGCATTCCTAGGCCAGCTTCAAAAGT
GTAGCTCCTTTAGAAACCCAGAGAGCTGTTGTCGAGGTAGCAGATGGAAACAGGTGACTG
TTTCCCACAAAGAACCCATAGCTACCCTGAGTCTGGTGGCACCAGTGCCACACAATTCCG
ATCCCCGGAAATAAGGGAAGGAATCGAAAAAGAAAAATACAGTATCCAGGTCCCCGGTCA
CAAATGAACATGTATGTATGGTTACAGTAACAGATCTGAGTCATACAGTAGAAATCATAC
ATCAGTTCAACTTTCGGTTGTAACAGAGAAAAGCATTGCGCGAGCCCAGCTGTGCCGCGA
CTTCTTCAGATGAGGATATGTTTCCAGCTTCCATGAGCTGTGCCAACACTTCTTCAGATG
AGGATATATGTTTCCGATTTCCAATCAACTCCCAGTCCATCTCCTCTTGCGAGCTGGCCG
CTCAGGCTTCACTTCAACGTCGGCAGCAGGTGATTCATTCTGGGGAGTCTGCACTTCAGC
ATCAACCTTTTTGTTCTGGGGTGCCTCCTTCTCGCCAGGCATGGGCAGTTTGAAACGTTC
GCTTCTTCTCTTGAGCCTCTCAACCGTGTCTAGATGTCGGTCGCGCTCTTCAGCCGTCAT
CTCAGACGCTTGCCCATTATCACCACTGCTCTTGATATCCGAACTGACAACTACAGCAGG
AACATCAGATTTACCTGATGCATCAGCAGTGGGGGGTTGAACATCAGCTTTGATGGAAGG
AAATGCATGTGTGGTCTCGTTATCAATGGTACTATAATCGATTTCTTTGTGGCTTGTCCA
TCGCTCCAGCTTAGACCGACCCCTTCTTGAATCATCGGTGTTTTCATCATCTGACATGGC
TTCTTCTTCCCCTTGTTTCACAAATGAATCATGTCGTTGAGTATTCTTGCTCGTTTTGGA
TGATGTAGCATGATCCCTACCATTTTCTTGTTCCTTCCCTCCTTTTGACTCAACCTATAC
AAAAAATTTGTTTGCATTTGGGTTGAGGAGGGTTAATATTCCAAAGAGTTAAAAAATCAA
AAAATATAAACCCACCAAGCAGTAAAATTTTACACAAAAAATATCATATGTTCATTCATA
TACCAGTGCCATGCTCTTTGTTTTTCAACTAGCAGCAAATTTTCTTTGCAAGAGAACTAA
AGTCTTTGTTATTTCACAGAGACCAAAATGTTACAGATGAGTAAACACATAAATCAATTC
ATGTGACCGTCCCCATGAATCAAATCTAGCTAATTCTCAAACATGGGACAGCATGCATTA
AAAACCAGAGGTGCACTCAGAAACCAGAGCTACTAGTGTGCCACCAATCGACCAAAAGAA
TGTTCTATAAAGAATTCCAGTGTGCATAAATACGAGCGATAATTATCCAAGCAAATCATG
AAGCGACCGAAAATCATTAAGAACGCTGACACCAGTTGATTTTTATGTTAAGTTTCTATT
GTAACACTCAATATGCATGCAAATTTTCTGCCCAGACAAGAAAGATCTAAATGCCTCACA
ACTTATTTTTGAGCTTAAAATGCCTCACAACTCACAAGCAATAAACAGGTACATCCTTTA
CAGTGGCATATGACTGGTGGTTGCACGCCTTACCCGTGGTTGCACGCCTTACAGTCGTAT
GCCAAACTCACAACGCTAAATGACTGGTGGTTGCACGCCATGCGAGAGACACCCAAGGCC
ATGCGCAAGGGATTGGCCACGATCACCCACCTGACGGCGTGGCTACTTTGGAAACACCGC
AACTCCTGCGTGTTCGACGGCGAACAGCCCTCCAT