morexGenes - Barley RNA-seq Database

Contig contig_2550671

Source Contig contig_2550671

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_2550671 (2946 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location

Predicted Genes from contig_2550671

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_38534	2	1931 bp	AK358318	Available	Available	None

CDS Structure of MLOC_38534

Contig Sequence (2946 bp)

>contig_2550671 2946 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGTTGGCGACGACAACCACATCCTCTCATGCCCCATCTCTACGTG
TCTACTCCCCTCCATTGTACCATCTCTCTAAGAACTCTACATGCACAGTTGAGATCCTCA
TCGAGCCCGGATGATGATGTCCAGGGAACTGGTCGTGTTGGCATGGGGAGGAGGGTGCTC
CTATTGTTGGCAGAACGTATCAACAAAAAAGCGCCAAGCATTGTAAATTCTTTACTTTCT
ACCGGATCATCATATCTTTCAGGTGCGCAAGTATAATTATTATTTCTTGATAAGACGGAT
TTGAAGATATGACTCAATATTTCATCATGACATGTAAACTCACTAATAGTGCACGAACTC
TTAGATTTATTTCTTATCCATTGCAACGCACGGACATTTTTCTAGTAAGATATCTTTTAC
ATAATTCTCTAAATTAGATCCAAGTGTCAATTTTATACTCGAGAAATTATTTGTAACTTT
AGCATTGTATTTAAATTTTGTACCATTAGGCATCCATGCAGCAAATGTGTCAAGAAAAAT
CTCTCATGGCTTAACAAATAACAATTGTCTCGCTCTGAATCAGAGAGAAGTGAAAAAATA
TACATTACAATACATCACACAATGTTTAAAAGTTTGCAAGTTAACACAGGATGTTTTTTC
TTTATTTAAGACATCAACGTAGTAGTTCAGAATCAGATTAGAAAGTTGAACATCCCTACA
ACAACTAATACAAGAATAGACAATGAAATGGGGGCATGAAATCCTTCTACTTTTACAGCT
TCCATTCCTCATGATGAATTCTTTGGGTAGTTATCTCATTTACAACTCAAAGTTTTTCCG
TTCCTCACGAGGATCCGTCCAATTTGCAATTTTCAGTGCAGTGTGCAAACTGAAAGCAAA
GCTTCATGGCAAATCAGGCAATGGTGGCCTGCGCTTGCTTTGCCCCAACCGCAAAGAACT
CGGTGATGACCTCGAGGGGCATACCCTTTGTCTCTGGGACCTTTAGGTAGACGAACACAA
AGGCGATGCAGCAAACGATTGCATATATACCAAAGACACCTGCCAGGCCAATAGCATTCA
GCATCACAGGTAGGCTGTAGGTAACAATTATGTCACAAATCCAGAATGTGAGAGCGCAAA
TAGCGATGCAGACACCTCGGACTCTGGTGGGGAAAATCTCTGCACAAAGAATGTTGGGGA
TCGGGCCAAAGCCCATAACAAAGCAGCAGAAGTAGACAATGACGCTAACTGTGGAGAGCA
CAGCGTGGGGCACCGTACTCAAGGTGATAACATTGGACACAACCAAAACAATTAGGGATG
CTATCAAGATGGGAATTGTGCCCAGTAGCAGAAACCTGCAGAAAAGGAAAAACTATAAGA
CCTTGTTTAATCGGAAAAAGTGGATAATACTGAGTACTGAGATGATTCAACCAAAGCAAA
CCAGTTAGTTACCTTCTTCCAGATATATCCATAAGTCTCATGGCTACACCAATGCTAGGG
AGCATGAGTAAGGTGGTGAGAGAACTGATCAAGATGGATGCTGATGCTGAACTGAGGCCA
AGATTGGAAAGAAGAACCGCCACACCAGCTTGCTCCAGAATTTGAGGAGTATAGTAGAGA
ACTCCATTAATTCCAGCAAACTGCACAAGGAAAATCGACTTAGTACTTGTTGGCCAGTTT
CATACTATATGTTTGTTCAAATCTGGCAAACATACAGTAACTAAGGAAATCAGCAGCATA
ATCTCTACCTGCTGAAGCATCTGAATTCCAACGCCGACAAACAGTGCACGCCTCACACCA
GGTTCAAACAGATCTTTCCAGATTGGACCTTTGGGAGCTGCCTCCGATGGGTGAGTCATG
GCTGGACCGGCCGCCATACGCTCTTCCATAAGATCCTTGGAGTAAAGAGCCGAGTGGCTT
ACCAAAGCAGCAGCGTGTATGAACCCACTGCCCCCTTGGGTCGCATCACCCCCACCAGGA
AGTGAAACAACAGAGCCCCTTCTTGAGTCGGCCACCCCCTCTTGGTGCAAGTAGATTCTC
TTGAAGCCTCCTTCCTTCTTGCCATCCTCGCCTTGTCGCTCTGACCATTTCCATGCGAGT
TGCCACCCCCCACCAATACCAGTGCTGCTGACTGCCTCCCCACCCTCTTCCAAGAGACTT
CTCCTTCTCATGCCCAAAGTGCTTCCATGGTGACCATGATCCTTCCGATCCGTGTTTGTG
GTCTGTCGCGACAGCAGCGGGCTGTGGACATTATCTTCGTAGTCACCTCCAGCATCAGAT
GCGTATTCCTCATCGTCCCTATGAACGTTCTCCTCATCCCAGTGCTCAGTTTTTGGATGC
TGATCTGCCACACTGAGCATGCTGCCAAAGTTAGGAAACAATGTACTCTGCATGCTTCCT
CCAGCTTGAGGCATGTTCTCATGAACGCTTCCGAAAAATGTGACTAGAGGATCCATAAGG
GGCACACTCTGGTTCACCATGCTGCCATGACGAGATGCAAGAGAAAGCACACTTCCAAGC
ATGCTGGGTCCCTTGGAAGGTCGAGCAATCCATGATTGGCCCTCTTCAGGCCCATATAGT
GTTATTTGGTCATTATCGCCATCAACAACATGATCACCAGCTGGGTCATTAGCTGGTCCA
ATTATGTACTCCTCAATGGAGGTGTCTCCTCCAACCTCCAAACCTTCAACAAGAAGGGCC
ATTTCTCCTGCACAGATTTGATTTGAGGTGATAACTATAACTTTACTCGTTATTCGTAAA
CCAGCAAGTGAAATTTACCAACACTTAGGTTCCAACATACTATACTGAAACCCGAATTCA
GCACCTCTTTCTCGACTGTCCTATGGCTAAACTTGTTTGGCGCTCAATTCATATTGCTTT
TAACATCTCTCCTCCTGTTAACTTGAACTCGTTATTTGGAACGTGGTTACAGGGAGTTGA
TGTTCA