Contig Data
morexGenes
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Map Locations of contig_2550648 (7218 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2550648

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38517 2 2381 bp MLOC_38517.1 Available Available LOC_Os07g39350.1, FRAME:+3, EVALUE:0.0, 13107.m04076 protein transporter family protein, putative, expressed





CDS Structure of MLOC_38517






Contig Sequence (7218 bp)

>contig_2550648 7218 assembly3_WGSMorex_rbca.fasta
GGTGGTGCGCGGTGGGGGCGAAGGGTTTTTGGATGGGGGAGTAGTAAGGGAGCCTGGGGA
AAATATTCCCCCCCCCCCCGTGGGGCATTTATACGCTAGGTAAAAAGGTGAATGGTCCCC
TTAACCACGCTGGTGAAATCCCATGTTTTAGTTGGATCAAGTCGTTGTCGAAGTGTGGGG
TATAACACTTGATTGATGATATCCCCCTAAACGCGGGGCACGATCTCTGTTTTATACGAC
ATGCCAAGAGTCGTCTCAAGCCGCAGTTCGAGTAAGTAATGACCGATAGGCATGATGTCA
TTAATATGAGGATTTGGAAAAAGTTGTGAGTGCCTTGTTCTAGGACTGGTCCAGATTTTG
GTCCTCAGATCCAGGCAAACACTTGGGGTGAAAGAAGGTGCCACACAGATTACTGGAGAG
CTATTGAACTCGTCCATCGAGCTGAAGATCGAAGAAGGTTATCCGATAGAGATCCTCATG
CTCGGCATTGAAGACTAGTTTGGGGGCTACTGAGGGAGTCCTCGACTATGGGTTCCCGGC
CGAGGTGGTTTCATCCTTGGGCCGGACTGAGGGCACATCAAGAAGAAGGACTCCGAAGGC
CTTATGATGAAGCGTGGATACTCCGGACTCTACCAAGGCTTGGCGTACACTCCAAGGGAA
GGATGATTTGCTCGAAATGTAATTCATAGATGGTAAACGACATTTATGTAACCCTAAATA
TCCCTGGTGCCTATATAAATAGTGGGATTTAGCCCGTAGAAGATACCCATACACACAAAC
TACAACCCTAGGGTCTTAGCCAACAATCTCACGATCTCGAGGTAGATCAACTCTGTAATT
ATCACAAAATCAATACAACAAGAGCAGGACGTAGGGTTTTATCTCGAGCGAGAGGGCCAG
AACCTGGGTAAAAACCTCATGTTGTTTGTCTCCTATTACCCTCAATCTGATCTCACAGCT
CGGTCCGCCTACCCAAGATCTGTTGGTTTTGACACCAACACCAATGCCGTTCATTTTTAT
ATGTCAACTATCTGACGGGTCTATGCCATCGAGATCATTGATGTCGGCCCTATGCCGACG
TTAGATGTAGGCATAGACCTCAACGGCAGTCGGGCCTATACCGACAGCTAGAAGCCGTCG
GAATATATGTTAATTTTGGGAGTGCTTATCGCACATCAAGATGTGTTTTATTAAAAATGA
ATTAAAATCTCATCACACAGATATATGACGTGCAAGTGACGTACTTGGAGGCTGCTACTA
AATTCAAGTAATATGCCTAGTTGATCGAAAAAGGCAAATGAAGGACGGGCTCCATGAAGG
ATTTAAAAAAAATTCCACATAAAAAATCAAACTTTTTGTACATACATAAATACGTATGTA
ACATGTTAAGGAAAATTACTCTAAAAAAACATGTTAAGGAAAATTATTATAGCAATATAT
TTTCATACGGGGCGTTTAAAAAAACATATACATAAATGAAAATGGGCCATTCTTTGTTGT
TGTTGGGCTGCGATTTTGTTCTTTTTGTGTAGCTTGCAAATAATAATATTTTTGAATGAA
ATTTTACAGATCCGTCACGCATATGTATAAGTGTTCACATATTATTTTTATTTTTTTAAA
CTTGAAATTATCATTTTTGAATCATTTAAAATAAATTTCACGAATGTACCCATCCACCAA
AGCTTCGCACTCTTTTTTCTTTGCTGGAGAACACCTAGCCATCCTTTGTCCCGTTCGTTG
CAGGTGTTTGCAGTTGCCTGTACTCCATTCATTCCAATCGGGTATTTTTATCAGTGTGTG
CTCTGGAATTTTTAGCCCTGATTAATAAGGACAGCTATTGCAAAAGGCATCTGGCCGACA
GAAGGAAATATCTAAATGGACATGTTGATGTCATTTAACTATTATATAAACACTGCAACG
AACCAAAATCCCATACAATCAAGTTGGCACCTGACACGATTACTACTCCACACATGCTGA
CCAGTACTTAATGAATTAACTTGTATTCTACTATCAATGTGAGCAGAAATTCAAAACGGA
GTGGGTATTACTTTGCATATACTTGTTCGGTTTCAATGGACATTGCATATAAGGAAACCA
AGACACAGCAAGGCAATGCATGAAAAATAAATGTGCCTTCTTTTACTTCTAATAGTATGC
AAAGCAAAATGAATTAGAAGTATTGTTTGCTACCATTCGCATAGAGGGGTTCTATATGTC
AATGCCAAATGTGCTAAAATGCTTTTTTTATGCACAATAGCTAGATGTAAGTCGCCTGAC
TTTACAATTTGGGCCGATCAAACTTTGAGTGAAGGGAATGCAGGTAGAGGGAAGGAAGAA
CCTCGCTGGAGGGCAGAAAGGACATCGCCGGAGAGAAGGATGAAGCTCGCCGGAGAGACC
CTCTATGTCCATCTTAGGGTGGCAGGCGACCGCACTATCTATCTTAGGGGTGTGGGGGTG
GCGCAGGTTCATTGGAGGAAAAGCTGGTCGTGGCCGGGTCCAGAGGGATGGCCGCAGGCG
GCGGCAGTACAACGGTGTGTGGCGGTTGAGGGGAGGAGAGTGTATGGTGGTCGATGGTAC
GTTTAGTGGGGAGGGGGGAGAAGAGCGTGGGGTGGGCTGGAGGTTGAAGAAGGAATATCA
TCTGCGCGTGTTGCATCTAACGATTGAAACGAATCGACTCAGCCACCTTGAATTTTCAGT
CGAGTTACACCTAGCCAATCCCTTTTAAACTTATATTTGTAATATACATAGTTCTCAACT
TATATACTCGCGTATGAAGTTTTATGAAAAATCACATCCATGGTAATCTCGATCAAAAAG
ATAAAACCCAAGCTACATTAAAAACACAATTTGATGAATAGTATGGTAACAATTGTATTT
TCTTCACTAAAAATATCGTAAATGTCAATATATCAGGAAACTTCACACGTAAGTAGAATG
ATCAACTAAGTTTCATACTGCAAAATTTCATATATTTTTAAAAAAATTCTAGTATATTTC
ATGAATTTACCATTTACGCATGAACCCATGTTCACCTTTGTATTTTCTGCCCCTAATCCA
AAGGGGGTGCTGCTACTCTTGTGAGAAAGCACGCAGATCTTTCTTGTCCTTTTTTTCCTT
TTGGGTAGAGAAAAACACGCAAATTGACGAATGATCCACCACACATGCTTTTTTATTATT
ACTCGTACGAAATTCAGATCGTCAAAAAAAAGAGACGATGCAGCATTTCAGCCATATCGG
CCACGGGAGGAGATAACCACGTCCAACAACTCCCGGAACGCCGGTCCAACGAGAGGCGAA
GACCCAACTGGTCGTGTAGCAGATTAATCTGGCATCGCCTATGGGACTATGGCAGCAAGG
CAAGACGACGTGCGTATTTTACAAGAGAGGTGGTAGCTACACCAGAGGTGACTACTGACT
ATTCAACGCCACGATTGGTCACCACTTGGGGGGCCACATACCAGTTGCCGCGAAGTGGGC
CCACGCCTACGTATACTATTCCAAGCTTCTGGTCTTGTGTCTGAGCTGAGCTGAGCTGAA
GCCCCCTCCTCTTGTCAATGCAACTTGGGTTGTGTCTATAAATGCGTCCCTTCCCAGCAA
TGCAACACTCCACTGCCACATAGAAACCAGCTCTCCAGCACCACTAAACTATACCGATCG
TCTGTATAATCCTCAAGCAGCTAGCACAGAGGCGTCGTCGCCGATGGACCGCGCCGCGCT
CCCGGCGGCCGTCGAGCCCAAGAAGAAGGGCAACGTTAGGTTCGCCTTCGCCTGCGCCAT
CCTCGCCTCCATGACCTCCATCCTCCTCGGCTACGGTACGTCTACTTCCGCCCTAATGTT
CAACGACCATTTCGCTGGATGTGTTGCATATAGTGAGTACGTACGTACGTACGTGCGTTG
CATGGGCTGATCACTCTTTGTTTGGCTCTGCAGACATCGGTGTGATGAGCGGAGCGTCGC
TGTACATCCAGAAGGACCTGAAGATCAACGACACCCAGCTGGAGGTCCTCATGGGCATCC
TCAACGTGTACTCGCTCGTTGGCTCCTTCGCGGCGGGGCGGACGTCTGACTGGATCGGCC
GGCGCTTCACCATCGTCTTCGCCGCCGTCATCTTCTTCGCGGGCGCCCTCATCATGGGCC
TCTCCGTCAATTACGCCATGCTCATGTTCGGCCGCTTCGTGGCCGGCATCGGCGTGGGCT
ACGCTCTCATGATCGCACCCGTGTACACGGCCGAGGTGTCCCCCGCGTCTGCCCGTGGCT
TCCTCACCTCCTTCCCGGAGGTGTTCATCAACTTCGGCATCCTTCTCGGATATGTTTCCA
ACTTCGCCTTCGCCCGCCTCTCACTCCGCCTCGGCTGGCGCATCATGCTCGGCATCGGCG
CGGTGCCGTCCGTCCTACTCGCCTTCATGGTGCTCGGCATGCCCGAGTCACCCCGGTGGC
TCGTCATGAAGGGCCGTCTCGCGGACGCCAAGGTTGTTCTTGCCAAGACTTCTGACACGC
CGGAGGAGGCCGCTGAGCGCCTTGCCGACATCAAGACTGCAGCCGGTATCCCTCTGGACC
TCGACGGCGATGTGGTCACCGTGCCCAAGAACAAAGGAAGCAGCGAGGAGAAGCGCGTGT
GGAAGGATCTCATCCTGTCCCCGACCTCAGCCATGCGGCACATCCTCATCGCGGGAATCG
GCATCCACTTTTTCCAGCAATCTTCTGGCATCGATGCCGTTGTGCTCTACAGCCCGCGAG
TTTTCAAGAGCGCCGGCATCACGGGCGACAACCGCCTCCTCGGCACCACCGTGGCCGTCG
GGGCCACTAAGACGGTCTTCATCCTGGTTGCCACCTTCCTCCTGGACCGCATCGGCCGGC
GGCCGCTGCTGCTGACCAGCACGGGTGGCATGATCGTCTCCCTCGTCGGCCTCGCGACGG
GGCTCACCGTCGTCAGCCGTCACCCAGACGAGAAGATCACCTGGGCCATCGTCCTGTGCA
TCTTCTGCATCATGGCCTACGTGGCCTTCTTCTCCATCGGCCTCGGCCCCATCACGTGGG
TGTACAGCTCGGAGATCTTCCCGCTGCACGTGCGCGCGCTGGGCTGCTCCCTCGGCGTGG
CCGTCAACCGCCTGACCAGCGGCGTGATCTCCATGACCTTCATTTCGCTGTCCAAGGCCA
TGACCATCGGCGGCGCCTTCTTCCTCTTCGCCGGCATCGCCTCGTTCGCGTGGGTTTTCT
TCTTCGCCTACCTGCCGGAGACCCGCGGCCGCACGCTGGAGGACATGAGCTCGCTGTTCG
GCTCCACGGCCACGCGCAAGCAGGGCGCCACGGAAGCCGACGACGACGCCGGGAAGGACA
AGAAGGTGGAAATGGCCGCCACCAACTGACCGCAAGTTGGCAGATCGCGATGCGAAGACT
TGCGCTGTATCCGTCTCGGCTAGCTAGCTGCCACACTGCCAGAGGAAGTAACGTGGGAAG
ATTCGCTGATCCGGCCGGTGCTGCCGGAGGGCGACGGCGAGCTCCAACTCGATCGAGACG
TTAATGGCTTCTTAATGTGCTAAGTTTAATATTTCGCGCTTTGGCTCGTTTTGTCCGGGT
AGGTCGTGAGCAATCCGGCAGTGCCAATGCCAAGGCTAATCGCTGCCGGACTATACTACT
GTAGTAGACTGTAGAGGTGTACCGTAGCTACTTCCGTGGCGTTTGTCTCGTACTCGCGCT
GCATGGCTCAAGTGCACGCGAGCTTTGGTTATTAGAGAGAAAAAATGGGGGTGGTTCAAG
GAATCTACCTGCCATCGAGTGAATCAAGCCAGCCATGGAAAATGTGTGCAAGAGAAAATT
AAACTATTGGTATTTGTATTGTAAAGACATTTTTAACATGGTATGATCAGTTTATGTAAG
CGAACATATACTCATCTTTATGAACACAACCATGTACATCATATCCCTATAAACATCATT
AATAGACTAGACTCAACCGACATATCATTTTAAGATTGACTAAGTCATCATATATACTTT
CGTAATCAGAAAAATGTCTACTTTCATTAAACACACAACATCGTAAGGTCTGAATAAAAA
AACTATTAATATGTATTGTAAAGACGTGGGGGTACGTACTTTCAGGCAGCACGCCATGGT
TACATTATGCATATATTAATTCATGTGTCCTTGTTATAAAATGGTAGCGGTTGGCCACGG
TAGCAAATCCTGTACTGAAGTTGATCAACTTGATCACGGGAATCGGAATCTTGAAAGAAA
CGTAAGAAACTAGTTGGTCTTATGCCAATTTTGTAACTGGTAGCGCTTGACAGGTTGAGC
GTATCCAGCTAGTCAAAACAGGCCTAGTGTGCACCACAGTGATTATAGTAGATTATCTGA
ACTTTTTTTTTTTAAAGTTTTTGCGTGTTCGCAGCGATGCATGTGCAATGATAATTTACG
TAGTTTGTTTTGTCATATTTGACGCTGCCATGTGATGATGCGTGGACTCATTTTTTGAGA
ACAGTGATGGACTTATGTAAAAAAAAATTGAAAGGGAAGTGGTTATCGGAATTTCATAAT
TGACGCTCTGTGCCCGCGTTCAAATATGGCCGGCCCTCTTTGATTGTATTGCATAGTGAG
AGCCAATAGGTTTTAGGAACCTTCTAAAGGGATTTTAAAGTGGGGTTTTCTCCTTTTATA
GTTTTATTTACAATTTTCGGTTATTTTTTTGAGATTTTTATTCGTTCTTTCTCATTTTTG
TTTCCTTTTTATTATTTAAAACAGATTATTGTTAAAATATATTCACAAATCTCCAAGAAA
ATTGATTTTTCAGAAGATATATTTAGGATTTAAAAAAATTCTACTAGTTTTCCATTTTTA
GAATATTTAAATATTCCCGATTCAAAAAAATATTTTGAATTTAGAAACTCGTTTGTATTT
TCAAAAAAAAATGTAAATTTGTTCAGTAAAAATATTACATTTTAAAAAATGTTGAGAATC
TCAAAAAACATTTTTTTTGTAAAAATAAAATTTAAAAAAGTTTTCAAATTCTTGAAAATG
TTCACATGTTCAAAATATGTTTGAACAATAAAAAATTACATTTTTGAAAAAATGGTTTGT
CTGCGAATAAATATTAGCTTTTATATATTTTATTTTTGAAAAATACATATTTCAAAATCC
GACTAAAAATGAAGTCTTTACTATGGGGGGGGGGGGGGGGCACCAAAAGGGGGGGGGAGG
GGGGGGGGCGCCACATGG