| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_2550546
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_38476 |
1 |
759 bp |
MLOC_38476.1 |
Available |
Available |
LOC_Os12g02340.1, FRAME:+2, EVALUE:4e-41, 13112.m00164 protein LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
CDS Structure of MLOC_38476
Contig Sequence (4497 bp)
>contig_2550546 4497 assembly3_WGSMorex_rbca.fasta
GTGTCTACCCTCTCATTATATAAAAGACATAAGGGTAAGGTGTCCTAATAGGACACGACT
CTTACCTTGTCTACACACCGTGCGACTTCAAGTCCAACTGTAACATACCTTGTACAATAA
TATTCGACACAACTCTAACAAAATCAAAACTCTAAAAATGCTACTTTTAAAAGCATTTTG
AAGCACTAATAATTTTTTTTTTGCCATGACTTCAAAAAGTATAATTTTGTACTGAAATTT
ACAAGCTACTAAAACATTAGTCAAAGTTTGCTGTAAAAAATTAAGATTTTTGAAGCATTT
TCAAAATATTTTATGAATTTACTGTTCATCCGAGCTCATTTGAGGTCGGACGTAGAAGAA
CACTTTCCCTTGACCACCTGCTAGTGCATAAATCGAGAGCAATATTGCAACGTTTCAGAG
CTGAGTATTGTTGTGAGACGCAAGCTACCTAGATGGCAACTACTCCTTCATGGAACTAGT
AACAAGGCCAATAAAACCAGGCATCAACAGTTAGGTTACGGATCTATCAAGCTATTAATA
CTTCTTTTCATACTGTGGAGGTGCCGCTCTGTTACGGAATTGTAGAAAGTTCAGTTGCCG
TCCTAGACATTCCGGGGACCAGTTTGGATGTCGACTGGCCTGTTTTATTGCTGCCCTGAG
CGCAAATTCATGGTTTGCCTTTCCTTTGATCTGCCGGAGGTTCTCGTCTCTTCTGCTTTC
GTACAATCCAGAGGGAAAAAAATTAAGATACGGCGGACTCTTAAACATAATAGCATGCAA
TTCTTTCGAATTCAATTGATCTTGATGAATAACATGTGTGTAACCTACGAAGCACCTGTA
GAGACACAAATACGGACATGAAAATTTCTAGATACAATATATAACGATGCGACGAATATA
TATAAATAATTAAAAATATTGTGCAATTAGCAAACATGTGCTCACCAGCCAGCGCATCGG
AGGACTATCCGGTCGTTCAATCCAATCCCGTCCTCTGATCAATCGAGTGAATAGAGAGGA
AGAGGACTATGTGGAGAGAGAGGCGAAGGCGCGGATGGCCGGACTCGTAAGGGAGGCGGA
GCTGGCCGCCGCCGCGTCGTTTGCTTGGTCACAGCAGTCACTCGACGTTTGCTGCAAGTG
GTGCCCTGTCCGTGCCCCAGTCCCGACTTCGGCCGCAACCAGCTGCGCTGTTTGTCCTCC
GCCCACCGTCGTCCTCCACTGCGTCCGCTTGCTCGCCGCCCACAGCAATTCGCTTCGCCG
CCGTCGCGCTATCTAGAATTTGTGGCGCGCGTGCTTTGCTGGGGTTGGGGAATTGCTTCA
TGCGCGCTGGAGGGAGCTGCCTGGCTTGTTCGTGAGATGGATTAGGCCCAAATAGCGGGG
CTGCATGGGTCGTTTGGCCTTGCCATAGGCCCAATTAGGGTGGCTGCGTGTCCTTTTTCT
TTTTTCAGCAATTCTTTTTCATCTAGCGAGAGCCAGCAAGCTAGCAAATGATAATATGCA
TACATGTATTTAAAAACTTGGACCAAATTAAGGTGCGGCAGCCGCCACACCTTGCTCACC
GGGGGCCTCCGCCACTACAATCACTACTTTGTCCTGTAGAGTAAAATTTCTGTTCCCCAC
TCTTATCTTAGTTTTTTTTAACAACACTCCAATGTATCAATTAATTAAAATTTTCTTATA
ATCATTCATTACAGCAAATGCCACACCAGGCGGAGCACAAAATACCATTTGTTTTATTAA
TAAGGAAACTAAACTCTGTAATCTCGTGCGCCACCTCATTAGCCTGTGGAGATATAGCTT
TACTAACTTGACCCTCTGCATCATGGATGTGGATGTACCCATACTACGGCGTGAAGATTT
TTCTTCCCGCAAATAAAAAAAACGTGTAAAAAAACAAAATAAAAGCAAAGAGACACATGC
CAATTGCAAAGAGAGCCAGCGTACTCTCTAGCGAGTACATGCACTTGCATGGTGGATCGG
CATTGTTGTGAATTAATTCCACCCGCCAACGACCTGGCAGCGACGGGCATCAAATGCCCT
GCATGTTCACCTCTACCCCCTATTTATACCCTCCAAACCACACCCTTTTCCTCCACACCA
CCACACCCACTCATCTGATCACCTGCTAGCCAGATAGCTTAACCGATGGCTCGTCTCAAC
AGCAAGGCTGTGGCGGCCGCCGTTGTCCTGGCGGCGGTGGTGCTGATGATGGCCGGCAGG
GAGGCCTCGGCGGCGCTGTCGTGCGGGCAGGTGGACTCCAAGCTCGCGCCGTGCGTGGCG
TACGTCACGGGGAGGGCTTCTGCGATCAGCAAGGAGTGCTGCTCCGGCGTGCAGGGGCTG
AACGGCCTGGCCCGCAGCAGCCCGGACCGGCAGACGGCGTGCAGGTGCCTCAAGAGCCTC
GCTACCAGCATCAAGGCCATCAACATGGGCAAGGTCTCCGGCGTGCCCGGCAAGTGCGGC
GTCAGCGTGCCCTTCCCCATCAGCATGTCCACCGACTGCAACAAGTATATATCTTCTTTT
CTTTCTTCTACTCATCCAAATGCATGCATGCATGCATGCATGGGCATCTCATCTTCTGTG
TTTAAGAGCTAGGAAGTAAATATAGTAACAAAAGAGTGAAAAACGGACGACTAGCATGTT
ACATATATTGTGTTTTTCTCTGACCAATTATATACCTCGTTTCTGTGCAGGGTCCACTAG
CAGGGATCAGATACTCCTTCCTACGTGCATGCATGGACGCGCTTGTGTGGAGCTTAATAT
CTACGTTGATGGAGTGCTCATACGTACGATATTGAGCAATAAAAAATAAAATAAAAGAGT
ATGCCTATGTCTGTACCTTGCACACACACTGTGTGTGTGCGCATATATATTTACGCGGCA
TGCATGCACGCGTCCGTATGAGTGACTGAACAGTCATCTCCTTGCTGTACTTTAGCCGAT
GTGTATGTGTGATGTGTCTGACCTACCTGTTCAGGCAATTAATGAATAGTAATTATTTTC
TTAATTATTGATGTGCATGGATGTTCAACTATGTGTGTACCTAGCTACTACTATATAGCA
GTATGATGGAGCATCAGACATGTGTGCGCTATACCGATGTTTTGAGCCGCAAGAAGATGC
ATGCGTTTGGGATTCGTGCAATGCGCCGTGGCCACTTTTGTGTTCCAAATGAACGAAATC
TCCACTAGTTTGGGATTTCTGTGTCATGATTTTGTACCCCCACAATATAGTGCTCCAAAT
AAATTAGCAGACGGTTTCGTTTTGTTGCCCAGGCTTCGTTAGCGTACTTTTTTTTCTTCT
AAAACGGAGGTAAAAGATTTACCTCATATATTAAATAAGAGAGGAGAGTTTAAGAGTGTT
ACAACGGAAGCGACGCTGCGACATGACAATTACTCACACACCACAAGATACCCTAACTCC
TTAGCACCCGCGGTAACCCACAGTTTGGCGACATCAATGATATTTTTCAACAGGACCGGC
CCCGCGGTAACCCACAGTTTGGCGGCATCAATGATATTTTTCAACAGGACCGGCGGAGGT
GCGCTCTTGTGTCGAAAGATCCGAGCATTACACTCGTTTCATACAGTCCAAAAGACAAGC
ATTGTCAGAAAGGCAAAAACACATCGGTTGGGATTCGTCATGTCCGTCCGCTTGTCCCAC
CATTCCAAGACGGAATCATCCAAATGCCAAAAGGAGGTGTCCATGTGCGCGAGCGAAAAA
CTTTCCGATTCGTGGGTTGGGTTTCGTTAGCGTACTGAAACACACGCAAGAAACAAAGAA
TGAAAAATTCTGAAGCAAAATTGATAACCATGGCGTTTCATTTAAAAAAAGGCCATTGTC
CGGCTTTAAATTAATAAAAAGGGTTACAATGAAACGGTACAACAGTACAACACAACATCT
CACACACAACAAACAAGACAAAAAAAGCGACATGATACAAGGATGAAACAAAACAAGGAG
ATAAAGGCACCAGTCAAATCTGGACCACGCATATGTGAATTGAGGTAACCTAAAACACAA
CAGTTTCCTTTAGAAAATGTTTTCCGTTGTAAATTATTGTACAAAATCATAGTTTTAAAG
GAAAAGTATTTTTTTCATAACTTAAGAGCAACTTTAATGGAGCGACCCATTTCGTCTGTC
ATCGTCTGTTTGGGTCGGCGCGAACAAAATGATGACCCAATGCGTCGACCCATTGCCAAA
ATGCGTCCGCGCCGATCCATTTCCGATCCAAATTTGGGACTGAAATGCATCGACGCGGAC
GCGGACGCGCGCTCGTTGTTCCCTTCCAACCACCGCGGCCAACATTATTTATGACAGTCG
TCATCCTCAGGCCCACGCGTCAGCGATCGCGGTCGGCCTTTTTTAATCCGAGCGTGCGAT
GGGTTCCACCATCTGCTTTCAGAACCACGCCCATCCACATCCAGCCACCTCCTCGGCGAC
CAAAACCCTAGCACACCATGGCTGGCGGTTTCTCAAACAAGGGCAAGGCCCCGCTCT
