Contig Data
morexGenes
Links



Map Locations of contig_2550545 (3585 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2550545

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38475 3 2194 bp MLOC_38475.1 Available Available LOC_Os04g52580.1, FRAME:-3, EVALUE:7e-82, 13104.m05393 protein tetratricopeptide repeat domain containing protein





CDS Structure of MLOC_38475






Contig Sequence (3585 bp)

>contig_2550545 3585 assembly3_WGSMorex_rbca.fasta
ATAAAAAATGCAATATTAAAAAAATTGCGAGTAAATTAGGTTAAATAAATTGCATGATAT
GATTTGATTGACGGCCACTGGTATTTGTTAAAGGTCTCACGTAGCGCCTTGCCCTCCAAT
TTTAGGAAGTTTCACAACTGCAAAATGTCCACCGAATGTTGACAGGCAGTTTATGGCAAA
AATAAAAAGAAGGAGGCGATATGATTTTCAGAGAAAAAAAAGATGTTCAAGTTGGCACTG
GGCTATTTCTGCTTTTGGAAAGAGCTCTGATAGTTCTGGCCATGATTGTGGAGCTCTGGT
AGTTCTGGCCCATTTGTCCCCGAGAAGCCACGGCCAGAGACCCACACGGCGGGAAGAGGG
CGCAGTGGAGATTAAGTAGTAGTTTAGTACCACCTCGCCTGCACAGTAGAGCTGCCAGTG
GAGCGATGCTATATAACGAGCTCCAGGGCGGCATTGTTTCAGCACGCAGCTGCGCGGTGG
GCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCACGCCGCATTTA
GCAGCATACGCTAATTTTTAAAGGGTTCCTCCTATTGTAGGAGGGCCCCACAATTCTCAA
ACGTAAATGTTCAAAAGCTCGTTTTGCAGAAATTTTGTATCTCTGTCTCTGAATAGGTTG
CCTGATTCAGGCAGGCATGCTTCTTGTGCAATATTTTTGCACTGTTAATATGTTTGATTT
CAGTTATTATAATGATGCATGCATCTGGTACTAATTGTTGAGAGAAGGGAAGCGGGTGAA
AGACCCAGTTGGCTATACTATTAATCATGTTCTAAGTGCGCAACTAATCAGCCCATTCAT
CGCCCTGGAGCACACCTTCTTAATCATACGGAGTAATATTCATCGCCCTGGAGCACATGC
ATGGCGGAAACTTCTCTGATTACAGTGTGAGTGCGCGACTAATCAGCACATTCATCGCAG
TTGAACAATTTGCTGACTGAGATCTTGAGACGATGTCTTGGGGCGGGACACAAATAAGCT
TTTTATACATATGATGAATGCGCAATCTATGTACAGAGACTGCTAGGCTATAGAATCAAT
GAAGATGAACAATGGTCTAAGATTGTTAGCTCGAATCTAAAGGGGCTCCCTACATGATTA
ACACATGCTGTGCTGTGTGCTCCAACCCACGGTTGCCGCGGTTGCGCTGAAAACATGATT
TCATTCCAGACTTGTTTCCTTGGCTAAGGTCCAAAAACCTGCGTAATAATGTGAACATCA
GCGAGCCGACACGTGAAACACGACTCAAAATCTAGTAAGATCTGAATTTGTGAGAACTAC
CTGAGTTGCAGCGCACGAGACGAGAGCAGCGGGTACTCATGTCTTCACCCACCAATCGGC
AACACTTCATCCAAGTATCTCAAGATGCAACCGAACAGATGAGACCACAGTTAGCAGGGA
TGCTGTCAAACAGCTATACACAGACCATGGAGTAAACTTATTTATCGATGATCCCATTCA
CTTCACGGTACGCACACCGATGGTTCTGACTTTGAATTTATATCGAGGCAAGTCATCTTC
TTCATCATCATCGTCATCTTCACTCGAATCATTCTCAACTTTGTCCCATTTCGAGTAATC
AAGCCCTGAATGGCCCTTTGGTTTTTGGATGGTCCCCCAACACTCAGGTTTTGAAGGCAA
ACTGGGAGACACTTGAACCTTCCGAGCTTCTGTTAAAGGTTCCTTGTACAGACTGGGAGA
CACTTGAACCTTCGGAGCTTCCGTTAAAGGTTCCTTGTAATCAAGCTCTGAATGGCCCTT
TGGTTTTTGTATGGTACCCTCAGGTTTTGAATGTAGATTGGGAAGGACTTCAACCTTCAG
AGCTTTTGTTACAGGTTTATTTTCAGGAATCAGTTTTGCAGAAGGTTGATCAGACTTAAC
AAGGGCAGTCTCATTCTTCGTATTGTCTTTTGGTGGCAGATCTTCTTTGTCTTCTTCAGT
ATACAGGGACTCCTCATCAGACTCTGGGATCGGGGCTAGTGACTTCAAAGTTCAAATTAT
AGCAAATATAGGGAATTAGACTTGGTCAGTAAACTAAGCAGGTAGAATTGTTTGAGAATC
CAACAGCAACAAAAAGAGAGGGAGAGGTTGATGCACTGATGTCAACTGCGAAAAATTTAC
TTTCTAAACAACAGATATGTTCCGAGTACTACATAACAACAAAGCCATGTTCTGTTCCTT
AAATCTTGCATTCGAATTATTGAAGGGGTATCTCTGTACTGATATACTTAAATCTGATGG
CACTGCATTCAAAGTAAAGCTTATGCAAGAAACTAGAACAATGTGACTTGGCACTTTAGC
AGAACAGATTCAGTTAAAGAAACATACCAGCTGTGTCTTCAGTCGTGCATGAAGGTTCCG
ATATACTTCAGAGGATGGATTTATCTCAATTAGCCGGTTTACATCAAATAGAGCGGACTG
GTAATCCTTTAGAGTGACAAGAGTCTGGGCACGTAGCATGAGAGCTCCAGCATGCTCGGT
GTCCAACTCGAGGACAGATGTGCACTCTTCTGCGGCCTATAAGATTATCATAAAAGAAGA
AAATTCAGTGTTACTAACCATGATGATAGCATAGAAAATAAGTACGATAAATGATGCCAC
GAGTACTTATTCCAGAGAAATACACAACCCCTGTTTGTTCGCAACATCTACTACAGTATG
CTTCGTTACAGGCCACATTTTTTTTCTCATGCACGTAGTAGATCATCAGTGCAGATATAC
TAGACTAGTCGATGAAATTTCATATTTATCACCACAATAAAATTTAAGCACAGAAACAGT
CCATTCAATATGAAAACCCAGTCTGTCAGATGTATCATTCAGGGTTCACAAAAGTGCTAG
ATGGTTCAGAGCCTGAGACACAGTTGAAAAAAATCGCAAGTCCACCATGGTTTAGGCATT
GTTGACTAGGACTCCTACATCGGAAATGCTATGTACACCTTCAGTTTTAATGTTTTGCAC
GTCTGCTAATTCTGGGAAAGCAACAACCAAGCAAGGCATTACTTGTCCTGGTAGCTTCCC
CAATTCAGTCAAGACAGTAAACTGGATTTCGACACCCCTTGGAGCACTAAATTTAACAGC
AGGCCATCTAAATTGGGACGCCAGAAGCACGGCCAAGATCCATACGAGAGCGATTCAAGC
ACCCTAAGCCCCCCAAAATTGGCAAAAATCTCGAAACCCACAGGGCCAAAGACCACACCT
TCACCTAGACGACGCCTCCAGGCGCCCCCCCGCACCGAAGCCTACCAAGAGCCAAAACCA
ATCCAACAGACACACGCAACCGACCGAGGGAAGCCGGGGGGGAACGAGACCTTGTGGAAG
TCGTGGAGCTTGAGGTAGCAGGCGGCGCGGTTGCTGTGCAGGGCGATGCGCTGCGCGTGG
CCCCGGGCGGCCGCCAGCGCCGCCGAGTAGAGCTCCAGCGCCTCCCGGTGGCGGCCGCCC
CGGTAGAGCTCGTGCGCCCGCTCCACCGCCTCCGCCCCCGCCATGGATAGGCCAGCGGCG
ATCCGGAGCTGGGGGGGGTTCGGGGGAGGGGGGGGGAGGGGGGGG