Contig Data
morexGenes
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Map Locations of contig_2550453 (3722 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2550453

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38440 1 708 bp MLOC_38440.1 Available Available None
MLOC_38439 2 1442 bp AK365690 Not available Available None





CDS Structure of MLOC_38440






CDS Structure of MLOC_38439






Contig Sequence (3722 bp)

>contig_2550453 3722 assembly3_WGSMorex_rbca.fasta
TAGGAACGGAGGGAGTAGTATGTAATACTATAAAAGCCTTCGTCTTTTATCATTAGAAAA
TAAAGATAAAGATTTTGTCGGATGGTTCGGTTAGGAGATCTGCCTCTTAGCGGTCTGGTA
GAGTTGCTCTTGCAAATCCCAAATTAATCCCAACACCTTCCCGGCTTGGCCTTGCTTCGC
TTCCGCATGCCTCCTCCTCGTCGCCAGCCTCCCAAACCCTAGCCCGCGCCGCCCTTTCCC
AGAAACCCTAGATCTCCCTATGTCCTCCGCCGCTGCTGCAGCCCCAGTCGTGGGTCAGGT
CGTGGAGCGGTTCCGCGCGCGGCTGCGCGAGGAGGCGGGAGAGGAGCCGAAGGCGGCCGC
GGTGGTGGGCGTCTACAAGGAGGCCCTCGCCGAGCTCACCTTCAACTGCAAGCCCATCAT
CACCGAGCTCACCATCATCGCGGGCCAGCACGCAGCGCTCGCTGCTAGGGGCATCGCCGA
CGCCATCTGCGCCCGCATCCTCGAGGTGGTTGCCTCCCTTCCATGCTATTCCCGAGGGCG
GCCATGTTGTATTTTGAGAAAGAAAGGCTTGGTGAGGGCTAGGTCTGCATGAGGAGCTGC
TTGCTGTGCTTATTCGGCCGATGCTTACTTGTGGATTTCCGTTGGTGCTAGGGTTTGCTG
AAAGTTGAGAAGTTTCGTGAAACTATTTTTGAAGTTTGGGCTTGATGTCCTTTGCACACC
CTTTGTCCCTATAATAGTGTAATCACTGCATTTTCATGCGAACCATTTGGATGTGTTGGT
GCTCATGTAGTGTGCAATATCAGAGTTCCTGTTTGTAGATACGTTGCTGGCTACAAGTTC
GACCGCTAGAATTCTGTAATCACAGTGGCTTGGATTTAATAGTTTTAAAGCAAACAAATG
CATTTTGAGATGTATAAGATTGACGCTTAGCACCCTGTGATATCGTTGGCTCTGTTTATT
CTTAATACTGTATTAGTTTTCTGATATCGGCCAAATGGTTGGTAATGTAGTTGAAACCCA
CCTTGTACATAGGCATTCCAGTTGCATAATTCGGTTGCCAGATAAGGCAACTGCTATGTT
GGCTAGGAACTTTTGATAGGCTGAAACTGAATAAAATTAGCAGTGGAGACACTTAGTTAT
GATGAAAGCTGGTTTTCTGGGATACTTTATTCTGTTCAGTTGTCCTGTTATCAACTTGTA
AAATAGGTTGCAGCCTGAAGTGGAAGTCTTAGGGAATATTATTTTTTTACAACTATGGGG
ATTACTAGATTGAATATGAACTAATTAGATGTTTCTTGCAGATATGATTTTGTTTATTTA
TGTTTGATGATCGAACGATGTTTCTTTTTTATTTTCTGAAGAGGGCATTATGCAGTTTTA
GATGGAAAAAATATGAGAGTTAATCCTGGTTGAAATTCTATTTTACATGCTTGCTTCTAT
CAGTTATCTCTTCACCTAAGGTTAGTTTGAATGATAGGCATCATTCTGCAATGTTCTTGC
AGGTGCCAGTCGAGCAGAAATTGCCATCTTTGTATCTGCTAGACAGTATTGTGAAGAACA
TTGGACGAGAATATGTAGCGGACTTTGCCACTCGATTGCAGAAGGTATTTTGTTTTGCAT
ACAGGGAAGTTCATCCCAAACAGCATCCTGCAATGCGACACCTCTTCCGTACCTGGTCGC
AAGTGTTCCCTTCTTCTGTCCTTCAAGGGATCGAGAACGAGCTTCAGTTTTCTCCTTCAG
AGAATTCTCCTTCAGAGAATAAGCGTCCTGCCACAACGACTATCCCACGACAGTCAGAGT
CGTTATCTCCTAGGCCACCTCATGGCATCCATGTAAATCCAAAGTATCTAGAAGTGCAAC
ACCAATTCAAGAATGGTACCAAGGTAAGAATATCATTATATCCTTTAAATGGGACAGTTC
AATAAAGGCCAATAGTTGGGTCTATTTTTTGGAATTCAAGTATGTTCTTGTTATCCTCTC
TGGCTGGCAACCTTTGAGGTCTGTTGCAGATCAAATTTAAAATTGTTGAAGTCAGTATTT
TCTTTAATCAGGTGGATCAGCTAGCAACCCGAGGGAGGCAAATGCTTGACGTAGTGGAGG
ATCATATTAACGGGTTAACAACAAATAGTTTGCGGGGATTTCCTTCCACTTCTTCAAAGC
TTCAGGTATTCAGTGTTCCATCTGCCCTAGTCTGGCTTCCAACCTAGAAGCCGTTCTCGT
TGTGTATGAACTAGAGAAGTTGCACTCTTCTCTTTTTGAGTAGTTGGTAGTGCTTCCATG
CTTTCATCCAAAGCTAAATTGCACAAATTAAATGGTATTGTCAGTAGTGGTGTAGTTGGT
GGTAGCAACTTGCAAGTCAGACCTTTTTGCATTTTTCACCCTTCTTAGGTATGGAACATA
TCACCTGCCTTGTCTTGGAAATCAACATAACCGAGTATGTTGGGGCTTCCAACTTACATT
ATTATAAATTTTGGTAGCATAACAGTGTAAACCGAGCCATCAAGGTCATAAGCAAAGCAT
CACAAGCAGTCAAGCACCCGCATACAGTCTCATCATCCCAAGTTCTTGTGTAGGGGAGCA
TATGATGTGGGGGCAAAGCCTTACTTGATGCTCAATCTTCATAATAAGGAGAGAAAACAC
AAATAGCTCAAGAAACACAAGAGAATAAACTAGATTGGACAAGTTTCATCACACGTGTGC
TATCCAAACATCCAAACAAAGATACACATAGATCCACAAACAACAAAAGTAGGAGTAAAA
GGATAAGTTCTTCCAAAACATCTAAGAGAGGTGGGCCCTTGAGAGAAGTTCTCCAAATCC
TAGTCGGAAAGGAGGTCTTGATGCTCCAATTGGTGAATCCTTCCTTAGGAGGCCTTGGGA
TGCTAGGAGGAGATATGATGAGCAAAGCTCTCTCAAGGTCTAGGTATATGCTTTGCTAAT
CCTAATGGGAGTCCAGGGTACGATATTAGTGTAGGGGCGGAGGACGGTGGTAGGAGAGGG
GTACATGGCCTCTTGGCCCGAGTTGCACACATGCAGGGGTCGGACGTCGGGGTTGGATGC
CGGACAGTTTGGCCGCTGATGCTGATGCTGCTTTAGCTGATGTGGTCTTCGGGCACGGAG
TGATCTCTAGGAGGCCGCGTTGGAGGCCGCAGTTGTCCGAACGTCCGTGGTCATGTCAGA
CGTCCGCGTTGGAGGCCGCAGTTGTTCGAACGTCCGGCTTATCTCTTCCTCGTCTCCTCG
CTTCTCCTCCACTATGACTTGGCCTTCTCCCCTTGCTTCTTCATGGTCAATTACTTGGTA
TTTGGGTATGCATAGAGTCTGGTTGGAGGCCGTAGTGAAGGCATAGGAAGTTCGAAGAGG
ATTGAATTTGCCTCGGATTCAATGGCTCGTGCCCGTGCTCTAGTCATTGGTCCAATTGGC
GTTTCGGGTGTTGGTGTAGGATCCATGTCGATGTACATGGGCTGCTCTGCACCAGCACAT
AAAGATATGATGTTACTTTCCTGATACCACCGGAAGTATTTGGGTTGGCGACGATTGCAG
TGGGTGCTACATTTGCTCTCTCACCTCCTAGTTCAATCTCCCTTGGCGATCTCTTCACAA
TAATAAGTACGAAAAACCTCCTAACTTTTTTTCTTTTCGAGAAAGCGCAAAGGACCTTTG
CGTTTCATTATATTGAAAAGATAGAGTTTGTTACAATCCTCCTAGGAGGCAGGATACAAG
CA