Contig Data
morexGenes
Links



Map Locations of contig_2550360 (3643 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2550360

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38386 3 1023 bp MLOC_38386.3 Available Available LOC_Os01g55360.3, FRAME:-1, EVALUE:5e-65, 13101.m05831 protein phosphatidate cytidylyltransferase, putative, expressed





CDS Structure of MLOC_38386






Contig Sequence (3643 bp)

>contig_2550360 3643 assembly3_WGSMorex_rbca.fasta
CTAGGGCATAATTCCAACACCCTATGTGTGCGTTCCCGCATGGCGCCAACTGCCCGAATC
CATGCCACTATAGAGTGCGTGCTCCACACTGAAGACGTCTCAGGGCAAACGCGACCTCTC
ACTGCCTCGGCCATTGAAGCGGCGCGACGTTTGAGGGCGTCGACCGCGTCGTGTCCCCTG
TGTCCGCGCCTATTAACTACCGGTGCCGCGTTACTGTACGGGGTGGGACAGATATCTACC
ATGCCCGTTTAATGCCCTATTCGTCGGTATGCTACCATTAAGCAGGCTCGTCAGCCGAGG
AACCCACTCCAGTGCCGCGCATTCATGCCTCGCCTCACAGGAATCCCCTATTTAAAGGGG
GCCACGCCTGGCTAACCCCATGCCACAACACAAGCCACTCCCCATCCTCCTCTCTTTCAC
CGCATCCTCCATGACTGCATGCGGTGAAGCTCTGTGTGAGAGCGTCTCTATGGAGATGAA
GCACGAGGTGACCGCCCTTGCCGCCGCCTGGCAGAGCCGCCGTGTCAGGTGGATTGAGCT
ATGTTTCCCGGCCAACTCACCCGAGGTATCCGACGACGAGGACGACACCACGATGGAGAC
GAGCTTCGATGACACTATGTGGTGCCCTCGCCTATGCACGCCGGTTTCACCATGGAGCAG
CGCACGTGCACTACAGCACCGCCATGACAAAGATGCAACCTGCGCCGAGGCCTATGTCGG
CATTCAAGCAGGCGCTGGAGCATCATCGGTTGACGGAGGGCCAGATAGACAGCGAGCGCA
CGAGCGAGGATGTCGTGTGGCCATGGCCGCGGCAAACCCCAATTTGATTGCAAAGCAGTG
TGCGCTCTACAATGCCCTTCGCGTGCAAGTCGTCGCTCGCCAGGAAACGGACGTCGTGGA
GGCACAGCTGCAAGCGATAGCGGACGAATACAACACTAGTTGCGCCTCCTATGCCTCGCT
GATGAACTATCGACCGGGCCAGTTCGACGACAATAGCGCGAGCGCCACCATCTCCATCGT
GGACCTCACGTCCACCAATGACGGACAAGGCGCGAACTCCTCCGAGGATGAGTAGGGCAC
GGGAAGCGGCAGGGCCTAGTGTCCCATGTGGGCCAGTCTGTCTCCCGTGTTCTACTCTTC
CTCACTGAAGACTGCACCTTCACTTCATCGTTCTCATCGCCGTTGCTCGTGGAGACGACG
GGTGGAGGACGACAAGGGCTTGGATGTCACACACCACCGTAGGATAGGTTTAGGGTCGGG
TCAAAACGGGTCTTTCTAAATGTTCAAAACATAATAAAAATCCGTTGTGTTTGCATGAAT
GTCATCCTGTTTGTATGAAATTCATTCGTATTTGGATGAATTTCGTTCAGTTGATTCACA
AAGTGTTCGAAGCGTTGGATCCATATGGATATCAATGTCCGGACATGGATGCACGAGGAA
ATTTGCAGATTGTCGTTGAAGATGCCATAATGTAGGTTTACTTTTTAGTTGTCCAGGTAA
GACTTATTTTGTACATATGATGTCGGATGGGTTCACCATAATTACATTTGCAGATTATAG
ATTATTAGGGTAATTAAGGGGATACAGCTTAATATGATGTACACAGATCTAGAACTACGT
AAGCATAATCTGAATAGGTTGTCAGGTAACTGCAAACACATCACACAACAAAATTTCATT
GTAATTGCATGAGTATAGGAGAGGCTTCATCACACAACAAAATTTCATTGTAATTGCATG
AGTATAGGAGAGGCGTTTGAAGCGTGTCCAGTAAACAAAAGACATGTTAATGAAGACTGG
GTACTCATTAAAATCTTTATCATGTTGCACGACCAGGAATTATCCGAGACCAACTGATGC
TTGCCACGAGCTTCACAAAATTCCGTTGGCACAACGCTGAAATTACGAGACAAGAAGCGT
CTGCCATTGCACCCCAACGATCAATTCAAGTCCATATAACTGTTTAACTAGCAAGGCAGG
GTTCCTCAAAAAAAAGGGAAGGACGCTCGCAAACTAAGGGTCTACAAAATATTTGATGCG
GAGACCGACAGCGATATACACGAATAAGCTTTTCCAGCTATGTTTTTACAAGAACACTGA
TGGTAAGAAACAAGGAGAGAATTAGCGCAGATGATTAAAAGAAGCAACATAAGTGGAGAG
CGGATCAAGAACCTAAACCCTATCCACACTCCGTTCTGTACAATGGTTTGGATAAGGACA
TCACTCTATCACGGTACAGAGGAGCTATGATGCTGTACATAGATCTAGAGCTACATTATG
AACCACAGAGCTGTCTTGTGTGGTTCATACGCAAATAAATCCTCAGCTTTGCATAAACTG
CCTTTCACGGAAGATCTCCCCAAGTTGCTGGTACAAGGATTTCTGCTCCTCGTAGGTTAG
GTTTCTTACAATCTGGATGGAGAGAAGTCGGCAATGCATGAGAATCACCCAGGCTAATAA
GATCATGATATGAAAACAAGATACAGTACTGACCTGATCCAAGATTGTGTCAACAGAGAA
ATTGTGGGGCGAGATAAATGATTGGTGATATATGTATGCAAAAACTGCCATAACCATCTG
GAAAAATGCACCGAAAATTAACATTGTTTGGCTAAAATGCACACGACGATATTGAATGGT
AAGGAAGTTCCTTCAACTTACTTGACAATCCATTCGGTCAGTAATTCCACCATGCCCAGG
TATACTGTCGCCAAAATCCTACAAAATTTGCAGATAAATCAAAGTGAAACTACTTCAGTA
TTCCTGAAGACATAAAAATAACGAAGCAGTACGCACCTTTATTTTAAAAGCCCTCTTGAA
GCCACTTGCAAAAAATCCTCCAAATGGTGCTATTATCGATGCAAACAAACCAAGGGCTAA
AGCATGCCACTGCACGGGTAAAAGGAAAACTTCTTTCCATGGAAACTGCCAGGAGAAAAG
TGTTAAATTCAGAAACGCTGGAAACATGATACAAACCCAATGACAAAACAATAGACTAAA
ATAAATACGTCAGTTATTATGATTAAGTTGCATTGCCATTGATACACCAATCAGGGGAAT
TTTATGGACATGGAAGAAGAAAATGTCCTGTTTGTTCAATCAAGAACTTGATCACACACG
CATGACGTGATTGTGGTTGTTTGATCGTTTAAGGTTTCAAGGATCAAAAAGGGGATAAAC
TCTGGACATTCAAGCACCATGTTTAACCTTGTCCAAATCCCCGTGGTTTTAGCATACATG
GCGCACCCATGTCAAACTCTGTGGATGCCACTTGTGAGATACATCAGCATCCACAGCAAG
TCACGACATGCTGTGCAGAGGTGGACAGACAAGCGTGGCCTGAAGGACAAAAAAAATTTC
AAGAAAATGCAAGAGATTTTGCGTTTCATTGTATTGAAAAGAGAGTGTTGTTACAATCCT
CCTAGGAGGCTATTACAGGTTCTGGAACATAAAATTCAGTGAACATCCCATGTTTGGAGG
ATGATGACTCTGAGCCCTAGAGCACCAGCGCGTGCCCAGTGAGCGGCCTCGTCTTTAATC
TTCGTGAGCATGGTGTCCACCGATGGTTGTCCTCTATTGAAAACGCAGTCGTTGCGCTGT
TTCCACAGCATCCATGGGACAAGGAGGGTCATGGTGCCCAGGC