Contig Data
morexGenes
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Map Locations of contig_2550230 (3496 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2550230

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38340 1 1167 bp MLOC_38340.1 Available Available LOC_Os09g30230.1, FRAME:+2, EVALUE:4e-121, 13109.m03018 protein disease resistance protein RPM1, putative, expressed
MLOC_38341 1 266 bp None Available Available None





CDS Structure of MLOC_38340






CDS Structure of MLOC_38341






Contig Sequence (3496 bp)

>contig_2550230 3496 assembly3_WGSMorex_rbca.fasta
GGGGCAATGCAGGCTTCGTACCTTCACAGCATTTAGCAGCAACATGGCATCATCTGCATT
GTTTCCCTCAGAATCTAAGTACCTTGCTGTGTTGGAGCTATCAGGATTACCAATTGAGAC
TATTCCAAATTCAATTGGGGAGTTATTCAACCTTAAGTATTTGGGCCTCGATAAGACCAA
TGTCAAGATACTTCCAAAATCTGTTGTGAAACTTCACAATTTGGAAACATTGAATCTTCA
AGGTGCAGAGTGTGTGCATTTGCCAGAAGGGTTTGAGAAGCTGAAGAAGTTGCGGCACCT
TCTTATTTATAAATGGCTGGATAGAACATGCTCGATTCTCAATTTTTTTGAACCTGTGGA
TCCGTTTGAGGGAATGTGGAGTTTGAAAGACTTGCAAACTCTGTCTGCAGTTCGATCTAG
TAAAGTATTCATTGTCAAACTAGCAAATTTATCTCAGCTGAGGATCCTTCGCATTACTGG
GATAAGGAGCATCCACTGTGCACAACTGTGTGACTCTCTGTCAAAGTTGCATCAGCTCTC
AGTATTAGGAATAGTAGCCAGCAATGAAGATGAGGTGCTCCAGCTTGAAACTTTGACATT
GTCATACCGCCTTAAAAAGTTCGGTTTATCAGGGCGGATTTCCGAAGGAACATGGAAATC
TCCATTTTTCTCAACTAACGGAGATGTCCTTTACGAAATATCTCTACGTTGGTGCCAGCT
CTCAGAGAACCCAGTGCCACGCCTCTCTGAATTGTCAAATTTGACCGCTATACGTCTACG
CAAAGCATATACTGGACAGGAGCTAACGTTCCATCCAGAGTGGTTCCCTAATGTGAAGAC
CCTTTCCTTGTATGATCTGCCACATGTCAACCAAATATACATACACGAGGGATCTTTGGT
CCGCCTTGAAGAACTTCGGATTAGAAACCTGGCCGAACTGCGGGACACCCCTGCCGGCCT
GGAACATCTGAAGTCACTCAAAGGGGTGCGGTTTCTTGACATGCATCCTGATTTTGAAAA
GAACTTTCCAGTGGCAAAACTAGAGCATGTCCCGAAAGTTCGCTGCACCATACGGTAATT
GCAACATCCTTAATTAGCTGGCCAATATATTAGGTTCGCCATTTTCATGCGATTCGTTGT
GTGCTTGATCACCTGCACCAAGTTCTAGCTTCTGGATTGATGAAATTTCGTTTTGCTGCA
GATACGAAGAGGAGTGAGTCTTTCTTGCGTGGATGGGGTTTGCAATTATCGCCATCAATG
TGGGAGCTATGTACGTGGAATGGCGATTTTTATGACGCAACTTTCATTCTTGTTTCTTTT
ATCGATCTCTGCTTATTTAAACAAGAACTGGTTTGTACTCCCTCCGTTCCTAAATANAAG
TCTTTTAAGCGATTTCATTAGATGTCTACATACGAAGCAAAATGATTGAATGTACACTTT
AAATTATGTCTATATACATCCGTATGTAGACATCTAGTGAAATCNNNNNNNNNNNNNNNN
TTTAGGAACGGAGGGAGTAATAAAGTATGGGAAAGATGTGTATTACTGCTATCCCATCTT
TTTTTATATTATTATCTAAGTTTATTTATAGTTGCACTAAGCTACCGCATGGGACAACTA
TTATGTATTTCTACACAGCGATTCATGTAATAATGCCGAAACATTCAGATACATGATGTG
CACGTATTTAAGAGAAAACAATCCTTATTTGCCACTGAATGCTATGTTCCAGTGCCAAGC
ATCTGAACTTTCTTCTCATCCTCTGGGTACTGTGAGTTTCAGAACTTGACAGTTGAGTTT
CCTTGCAATCTTGCCCTGGGAAACAAATGTTTTATGACATGTAACTTATGCAATACCAAT
CACATTCAGATGGTCTACTTATCTGCTGCATTACTGTTTTGCATATTGGTGCACTAGTAT
TGTATATCACTAGTACTCTACTGTATAGAGCACTAGCAGGCGTGAGAAGCATGAAGTAGA
AGACAAGTACTGTAGTTGGGTGTAGTTGCGCGGCAGTCAGAGCAGAGCACGTCATGAATC
GGGTTAGCTGGAGACTAGGAGCTGAGCGCTCACCTTGTGGAGGTGCCCGGCGGCGAGGTA
CGGACGGGCGAGATCCGATCTGGTGGGCTGCGATAACTTGTGATGCCAATCTGTATTCTG
TATACACTCTGCCAGACTGAAACTCCTTGAAATAAGCGGTTAGCTTTCCCAAAAACAATC
AACAACTCTGTCGGACTGAAAGTCTGAAACCATAGCATATATAGCAGCAAACCTTGTACT
CAGCCTGAATTAGAAGACAAGCAGTTGGGTGTAGTTGAGAACCCGATGAATCAATAGGCT
ATGAGCTGAGCACACACCTTTTCGAGGCGTCCGGCGGCGAGGTGCCATAATAAGTTTTTA
TTTTTCATAAATCTGTATTTTTAAAACATAGATCGTGCGTCTATTTGTTGAACAGTTTTC
AACGTTAGATTTCTTCTGCCGATAACTAGATCCCATGTTAATAGGTATTGACGAATTCTT
TTTATGAAAAAAACTGGACAAAAAAATCATACAAAAAAACCAACCCTCTCGTGATAGAAA
AGCAAAAAATACGTTTTTTCGACCAAAATCTAAAAACACCAAAAAAATAAAAACGCGTGC
GAAAAAATAAAAAACCAAAATCCGAACAGAACACTCAAAACGCGAGTCAAGACGGCGGCT
GAGAAAACGGCACGTGACGGTCCGTAGGAGTGATAGTTGAGCGGCTCCCGAAGAAGTACT
GGCCAACCACTGGATCCCCTTATATCTTGCCTTCAACGAGTCTGGTAACTCGCCGAAGGG
GCGAGTGAAATGGGCGGGCCCACAAGCATCATAGGCCACATCCTCTTTTTTCTGTTTTTT
TCCATGTTTTTAAATTTATTTTTTTGCTTTATTTTTATATTTTTGTTTATACTTTAAACT
TAAAATATATAGTAAGAAAACAATCATTACAAAAAACGTTCGAAAATTATTGAATAAGGT
TAAAAAATTGAACAAGTATTTGCAAACTGTTGAACAAATATTTGAGAAATGTTGAACAAG
TATTTAGAAAAATATCGATCATGTATATAAAAATGTTAGTCAAGCATATGAAATACAAAT
GTAGAATAATTATTTGAAAACTGTTGAATAATTATTTGGAAAATGTTGAACAAGTATTTA
AAAAATATGTTGATCATGTATATAAAAATGTTAATCGAATGTTTGAAAAACAAATGTAGA
ACAAGTAGTTGAAAAATGTTGGATAAATATTTGGAAATGTTGAGCAAGTATTTAAAAAGA
GATAAATGCTTGGGCGGTCCTCAAAGTTTCCAAGGTATGTCAAGTAGGTCTCAAATATTT
GAAAATCCACGTCTGCGTCCTAAATGTTACGTAAGTGATTCATTCCAGGTACTTTTCTCG
TCTGACCAGCTTTGACCCACGTCATGTGGACAGCGGGCCCAGGAGACCAAACGGTAATAT
TAAATGTGGTTAAACA