Contig Data
morexGenes
Links



Map Locations of contig_2550115 (3709 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2550115

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38288 5 1524 bp AK365455 Available Available None





CDS Structure of MLOC_38288






Contig Sequence (3709 bp)

>contig_2550115 3709 assembly3_WGSMorex_rbca.fasta
GGCAGTGGCTAGGAGAGATGGCAGCGGCACACGCACGGCGGCAGAAGTGATTAGGTTTAG
GACCGGTTCGGTATCTAATACCATGTGGTTTGACAATATTTGCATTGATAGTATGCCTTA
GCATGTATAAAACACATGGACAGAAATATCTCAACCATATCCGCTATACGAGGAAAGGAC
CGGGAGATAAACTAAAAAATAACAAACATAATCCTAACTGCCTAATTAAGTGCTTAACAC
GCTCAAACCCTCAAACAAGAATATTCTGCTACGGCTTAAAAAAAAACTCACTCTCATGTT
ATGCGTACCGCCAACGAGCATGTAACGTACGCACCTCGGCACATCACGAACACGGTGGTC
TCATTAACTAACACCAGATTGATTCCATGTGAAAGCATATGCTCCCAAGAGCCATACGGT
GTATTTTCTTCAAACAAAATATTACCTTCGTCCCAAATTAGTTATCTTAGACTTAGATTT
AACTAAATACTGATGTATCTAAGATAACTAATTCCGGACGAACAGAAGTAGAAGATATGA
TCCATATAAGTAGTACATAGGCAGGCAGGCAGGCGGATACTCAGACAAGAGTCCCTATGA
AGAAATATGTATGAATTGGTTTCATCCCAACGCTATCACACTCCCTGCATCCGAAATTAC
TTGCCCTAGAAATGGTTGTACCAAGACATATTTTAGTTCTAGGTACATCCATTTCTAACC
ATTTCCACGACAAGTAAGGAGAGGGTACGATTCAGTAACAATTTCAGACAGTTAGTTGTT
ATACAGCAGACCTTCTCACCCTTACCCTGCCTACCACCAACATCTTCCATCACATCAGTT
CAGAAAGAAAGAAAAGATAACATCTTCCATCACAATGCCATTGCATCAGCAGAGTATTGC
TGTTCCCTTCCAACACAGAACAAGTCCAGTTAGAAGCACTGACCCAGCACCAAACCGATC
ATGCCAGCTTCCTCGCTCATCATAGACAGACAGACCCGATCATGCCAGCTTCCTCGCTCA
TCATAGACAGACGACCGAGCGACAAGGACGACGGTGATTGGCCGGCCATGTGGTGCTTGC
CAACTTGTTATGTTACAGCCTAACAAGTTGCCACCTTTCTTCTGTTCCATGCACTCATCT
TTCTCAGCGTAATTACAGCCAAGTATCCAGTAAACATCATGCACTTCACACTGCTTACTG
AATCAAAGAGGAGGTCATCAGACTCGAGTCTTCAGCAAACATTCACTTGAGCACAAGGTG
AGTCAAAACGGAACGGAACGGTTAGACCAACAACACTTGGTACCCTATCCTTTTGCAGTC
AAAACTGTAGGAGGAGCGGCTGCCTGTCAACAAGCTACAGAGTGTTTGCATACCCTGTAC
CATAGGAGGCACCAGCCACTTTCTTCCTGGACCAGCAAGGAAATGCGACCTCTTTCAACT
CTACTACCAGGGATCTAACAACAAGACAGACAACTAAACTAGTACTACCTAGCATAAGAC
CACATGGTACAGATCAACAGCAACCGGTCGACCGGCTCCAGCGCCCGGCCTTCAACGGTC
AAGGATAACTAACAACAGACACACAGTAAGCTGGAGCGTAAGTCAGCGCACACACGCACG
TACAACACAGGCATGGATGGCTGCCTCCTGGCTCATCAGGAACTCCCCAGCTCCGACGAC
GGCAGGTCCCACACATTGATCACTTCTGGCCAAAAAAAGTAACAAGGAAAAAAGTTACTT
AAGCAGCAAAGCCCAAGGCTCATGTTCAGTTGAATAAAGCATAGACAAGAAATGAACAAG
CATATGTGTTGGCACAGGTACAAAGCAAGATTCATGGTTGACAAACTAGTCGCCGAGCAT
GGAAAAAACTACAAGAAAAGTTGTTTCAGTAAGCGGTAAACACGGCCTGAAAATAGGAGA
TAACATAGATGCAGCACCCTGGCAGAAACAAGATTTGTAGAAACTAGCTACCTCGTCCCA
GGGTAAGTTCAGTTAAACATGGCATGCAGGATACATGAACAAACATAACTGTAGAGTTGT
TTCGGGAAGTTGGCACCGGTACATGTACAGTAACCCAGGAAGAAAGAAAGCCAAGAATGA
CGATTGGCAAGCTAGTCACCAGGTACGGAATAAAAATATAGATCATCGAATGGGGGATAA
GGTGCAGCTGTATATTATATAAGACATAAAGACTAAGCGGAAAAAGAGCAATGTCTGTGT
ATGGAACTGACAACGTGCTCTGTAAAAGAATAGCATGGTATTCATATTCCTATTTAAATA
AAACATGGTTTTCATATAAACAGCAAATGATGGAAAATGATGTTGCTTATATCACTAAAT
GTCCGATCCTGGGTTCACGATGTCGCTGTAATCCATGTGGGCATGCAAATGACTCTAGGA
ACCATGTTAAAAAAAACAAATAATGCCTCCAGCCCTCCAGGACACTGACTGCTTTGATAC
AGGCAGCTAGTCCCCATGCATAAAAGCTATCATGCATATGTGGCTCGGTCCAAAAGTTCG
ACGGAATATCAGCATACATTATCGAGTAGCTAGGAATGTGCACCCACAAGTTAACTAATC
TACACAAGCTTCATCCACATACATACATGGTAAAAAAAACTGAGACAAACCAGGTTGGCA
ACGCTCCAGTTTCAGCAAGAACAAACATAATGGTATCTTGTCCAGAAGTGGGAGAGCTTA
CCTAATGGTATCTTGTCAAAGGCACCATATAGGACGCCATCATCACTGGGAATTCCCTGG
TGAAATGAGAAACCGTTTCAATATATTACTTAAAGAGATAACAAAAAAGGAATACGAATA
CAGGACAAAAATGCAATGCTGCCGATCAGAGTCAGAGAAGAACAATGTAGAAGTGATGTA
CTGACAGATGCCAATAAGAGCATGAACAGACTGATTTGGTAATTACCCCTTGAGCATGTG
ACTATATGAGCAAAGCATTGATCAGAAGTGCAACTCCTAGTATTAAAGCAAATTGTACAC
TAACAATTCCCTTCCCCAGTTAGATGCCTCACTAGCTGCACGAAGAGTAATGAACAAAAA
CAAGGGCACAGGTATATCATTTCAAAACAGCCATCTCACCTGTGCATTGACAGCTCCCAT
CCAAGTCCACCTATTTCCGGAATGTGGTGGAACCGATGAAGAAGATGCTGGGATGTTAGT
CTGATGGTCAGGAAAGCTTGCGGCTTGCTCGTCTTGAGAACACATACGTTCTGGCAGAAA
ATTATCCATGTGTAAGGTATCACTTCTGTATAGTGGACATGTTCAAATGTAAAAGATTGC
CCTCTCCCCCTTGAGACTTACGACAAAAGAAAAAAAGATCTTAAAAAGCTTACTTGGGTT
CTAAGAACTCTCTGGTATCAGGCTGCTCTGCATAATCATCATCGTCGTCGTCGTCATCCA
AATTAATTATAGGAATCATCATTTGACCATTGCCCAGGCTGCGAAGTGTGGCTTGTCTCT
TTGCAGCCCGATCCACAAGCATTTGCCCATCCTTTAACTGGGCTCCATCAACTGCAGATT
TATTAACTGAATCATCATTTACTAGCATCTGTTCACCGTTCAGATCACAATGATCCAAGT
CATGCACAACTGTAACATCATCTAGAAGCATTTGCTCCTCCTTAATCCGGTGATTAACGT
CTGTAGCAGGATGAGGTAGCAACTGCTCATTCTCCACCTGCTCCTCGGC