morexGenes - Barley RNA-seq Database

Contig contig_2550034
Source Contig contig_2550034
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_2550034 (6792 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location
Predicted Genes from contig_2550034

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_38252	5	2379 bp	AK355343	Available	Available	None
MLOC_38251	1	2476 bp	AK369050	Available	Available	None
CDS Structure of MLOC_38252

CDS Structure of MLOC_38251

Contig Sequence (6792 bp)

>contig_2550034 6792 assembly3_WGSMorex_rbca.fasta
CAAATCCCTACTGCTTCATTCAGATTGGAATAGTTTGGAATCTACTCCCTCTGTTCCTAA
ATATATGTCTTTTTAGAGATTTCACTAGGGGACTACATACGGAGCAAAATGTGTGAATCT
ACACTCTAAAGTATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNATTTAGGAACGGAGGGAGTAGTTTCCTTTCAAAATACCTTCTATATTTAATTAT
TTATGCACCATTCTTTACCTGGACTTCTTTCCATATCTTCCTGTATTTAGTTTCTTACAA
ATGATTATTACGGTAATAATCGGTGTTATGCTGCTGCTATGGAGCAGGTTGTGCGTGAAA
ATCAAGTAGTTGTGGTCGTTGGTGAAACTGGTTCTGGGAAGACCACTCAACTTACTCAGT
ATCTGCATGAGGATGGATATACCACAACTGGCGTTGTTGGCTGTACTCAACCGAGACGTG
TGGCTGCCATGAGTGTCGCCAAGCGGGTCAGTGAAGAAATGGAAACTGAACTGGGTGATA
AAGTTGGATATGCTATCCGATTTGAGGATGTCACTTGTGCTAACACTATAATAAAGGTAC
AATTCTGCTTGTGCTTTAGTTCACATCAACATGTGTTGCGTATATTTGTAGTGTTCGAAA
AACCTGATTATAGAAAGGTTTAGTCCATAGGCTGGTAACCTCGTTGTTGTGTTAGCCTTA
TGATTTCTGATTAGATATAATTGGCCATTCCCAGAACTCTTTAGATTAACATTCTTAAGT
TCAACAATTATTTTTTACTGACTTTCAGTTGTTTAGCATGTAATTCCTAACACATATTAT
ACTTTCCCTTCTGTTTGTTTTGCAGTATATGACAGATGGAGTGCTTCTTCGTGAAACCTT
GAAAGATGCCGACCTTGATAAATATCGGTATGCTGTTAACTTGCCGTTGTTTTAGAATAT
TCCTGTACCTCAGTCTTAGAATATTGCTTGCTGTAGTAATGCTTTCCCCCCTTTTATGTA
GTGTTATCGTCATGGATGAAGCACACGAAAGATCCCTCAATACTGATGTTTTGTTTGGCA
TACTGAAGAAGGTTGTTGCACGTCGGCGGGATTTTAAGCTAATTGTCACATCTGCAACCC
TAAATGCAGACAAATTCTCAAAGTTCTTTGGAGGGTAAGAGAACTTGTTATATCTTTTTC
TCTATTGCAAAGATTTGAATCCGCTGCCTGCAAACCCTAAAATTAATTTCTTTGTCTGCA
GTGTGCCTGTATTTAACATTCCAGGCAGGACGTTTCCAGTTAATATCTTGTTTAGCAAAA
CACCATGTGAAGATTATGTGGAAGCGGCAGTGAAGCAGGCCATGACAATTCACATAACGA
GTGGCCCTGGCGACATCCTCATCTTCATGACCGGACAGGAAGAAATTGAGGCTACTTGCT
ATGCTCTTGCTGAGCGCATGGAGCAGCTAATATCATCATCCACGAAGAATGTACCCCAGC
TCTCCATTTTGCCGATCTACTCGCAGTTGCCTGCTGACTTGCAGGCCAAGATCTTTCAAA
AGGCAGAAGAGGGCACTCGCAAATGCATTGTTGCTACCAATATTGCTGAGACGTCACTCA
CAGTGGATGGTATCTTCTATGTCATTGATACCGGGTATGGAAAGATGAAGGTATACAATC
CACGGATGGGCATGGATGCTCTTCAGGTTTTTCCGTGTAGTCGAGCAGCTGCAGACCAGC
GTGCAGGACGTGCTGGAAGAACCGGTCCTGGCACATGCTACAGGCTCTTCACAGAATCAG
CTTACCAGAATGAGATGCTCCCTAACCCGGTGCCAGAGATTCAAAGGACTAACCTGGGAA
ACGTGGTTCTCTTGCTGAAATCTCTCAAAGTTGAAAACTTGCTTGATTTTGACTTCATGG
ACCCACCCCCCCAGGAGAATATCCTCAACTCCATGTACCAGCTATGGGTGTTGGGCGCCT
TGAACAATGTTGGTGGACTTACAGAAATAGGTTGGAAGATGGTAGAGTTCCCACTGGACC
CGACTCTAGCAAAGATGCTTCTCATGGGGGAGAAGCTAGACTGCCTTGATGAAGTATTGA
CCATTGTATCCATGCTCTCAGTACCCTCAGTTTTCTTCCGCCCAAAAGATCGAGCAGAGG
AGAGCGATGCCGCAAGGGAAAAATTCTTTGTCCCAGAGTCTGACCACCTAACACTCCTGA
ATGTATACCTGCAATGGAAGTCAAATCAATATCGAGGAGACTGGTGCAATGACCATTTCC
TCCATGTTAAGGGTCTCCGTAAAGCTCGGGAAGTGAGGTCTCAACTGCTAGACATACTGA
AAGCCCTGAAGATCCCACTGACATCATGCCATATGGAATGGGACGTGGTGAGGAAGGCTA
TCTGCTCGGCATACTTCCATAACTCGGCAAGGTTGAAGGGCATAGGAGAGTATGTCAACT
GCCGGAATGGGATGCCGTGCCACCTGCACCCCAGCAGTGCTCTCTATGGTCTCGGGTACA
CCCCTGACTATGTGGTGTACCATGAGCTTGTCCTGACAACCAAGGAGTATATGCAGTGTG
TGAGCGCAGTGGATCCGCAATGGCTGGCAGAGCTGGGTCCTATGTTCTTCTCTGTGAAAG
ACACGGACACCTCCCTGCTGGACCACAAGAAGAGGCAGAAGGAGGAGAAGACGGCCATGG
AAGAGGAGATGGAGAAGCTGAGGCAGGAACAGGCGGAGGCAGCCCTCATGGAGAAGGAGA
GGGAGCGACGGAAGAGAGCCAAGCAGCAGCAGCAGATCTCTATGCCGGGTCTGAAGAAAG
GCTCGACATATCTGAGGCCCAAGAAGATGGGTTTGTAGATAACAAAGCTCGAACAAGCTT
TTGCAGTGTATTGTGTTTTTTGTAGGCCGAGGGAAACCTGTACAATAGCTATATGTTGGT
GATCCAGTCACGCCTGAAGGAATGTAGTAGTTCAAGCCTGCACTCTGCAGCATGTACAAC
ACACATGAATGTAACATTTACAGAACTTGAGAGACGAAACGGCACTGTCAACCACTTTGT
CACGATGGCAAAGCATTCTTCTTGGTACCTGTTTGTATGTACACTTGTTAAATTTTAATT
CTTGGTTCTTGACTGACTTGTAGCTCAAATTTAGATTGAGTGACATGAAGTCCACCATCT
TATTAGCCGGTTCTGAAGTGAACAATTCCCTAGCAAAAAACACACGCAAAAAGAAACCGT
GTGGCTGCTGGGATTCGAGCCCAGGTCTCCACGGCCACAACGTGGAATTCTCACCACTAA
ACTACAGCCACATTATTGTACGAAATAGCCTGAAAGCTTTTATAAATATTGATGGACCTC
AGACTGGCCCCCCTCGCTCGATGAGCTTTTCTTCTGGTGGGCCCCGCCTGCTCCATTCTC
CACTTTCCCGTCTCCGCCTCCGCCCAAGCCCCAGCCCCCAGGGAAAGGGAAGGGAAAGGA
GGTGCCCTAACACCGTCCAACAGTCTAACAGCCTCCGGAGGCGGAGGCTAGCGGTGTGTC
ACCTACCGCCCCTCGCCGGCGAGCAGGTACTCTGCGATTCCTCGTCATTCTCAACATCCC
TATCGGGCTGGGCTGGAGGGAGCCCTCGTTCTTAGATCCATCGATGCCACTTGCACTTCT
CCGTAATCTCATTCTCGTGTGTCCGTGGTAAGACGGCTTTGTGAATCGTGACTGGAACGC
TATGCAGAAAAGCAGGCAGTATAGGTTTAATGCATTGTGCAGTTGTTCCATGCATGCGTG
TTCCTCGGTGGCAACTGATTGCGCCGCCTGACTCAGCATTTGCCAAATTGCGGGTTTGCC
TTGTGCTTTGTTCGAATCATTCAGTGCGTGGTGCTGATAACAAGAGCACCGTCTGGGTTT
GGTCGGTTCCGTTGACTTGACTGATTCTTCTTGAGTCTTCTCATGGTAGACGCATGGACT
GTTCTGCATTCTGTTGGTGCATTGCACAAGACCTCATTTAGATGGTTAAGTGCTTTTCCG
CATACCACTGATGGAATACTTGGATCAGGTAACAAGCGGATGCGAAAAATTTCACGCAGG
ATATTATGGATATTTTCACGGCACTTATTTATTGTAAGGCTTTTCTAGGAAAAAGTATAC
TCCCTCTGGTCATGTTTTACTTGTCACACAAATTGATAAAAATGGATGTACCTAAAACTA
AAATACATCTACATACATCCATTCCTATAACAAATATTTTCGGACGGAGGAGGTATTTGA
CAATACAGAATCAGTCTGCTTATTGTTTGCCATGTTGTGCCCATTTGCTGGATCTGCCGT
GAGAACATTTGAAAATTCATTGCTATCGCCTCATTAAAAACTGGGTCTACCTAGGGGGCG
GGTGATAACGTATACACACCAGCAAAGGTTCCATTTTCCGTTTCTCCTTTAGTCCATGTG
CTTAAACTTTTATATAGCTTGAAATAGATTGTAATTGGGTCACTTATCAGGTTTCATCGG
GATCAAGCCCCACACCCCAAGCTACCACCCTGAAGAACAATAACCCCCTTGGAGCCTTAC
TTTTAGAGATGCCGTGACTCTCGTCTCACGACCCTTTTCCTTGCACTGGTCAAGCACAGG
TCCTGGTAACTGTGCTTTACACAACGATTTATCATCAGAGACTATAGAGCTAACTTGCTT
GGAGAAATGAAATAATATTTATGAATATTTATACTTGGTATGATTTGGGTGCCAAATCTT
GTAGAACACCTGGAACATTTACTAAAAAAGGTTGAAAGTTATTTTGAGTGTCCTAAATAA
TTGTCCTCTTATTTTGTTTTGCTAGACAGCCAGAGCAATATTGTTAGAAGAGTCTGTTTG
TGGACCTTAAAAGCTGCAACATACTGGTGGCATCCAAAGATGTGCCATGCTCATCTCCTC
AGCTGATTACTGAAGGGGAAAACATTATTATTACTCAGACTGACCTCACTAATATTTCTG
CCACTGTAAAAAAATTCTACACCTGTCACTGTTTAGATTTTAGAACAAATAGTGGCTACG
GATGGAACTTTTGTGCATGTGTATGTGTATGTAATTCACTTTACTTTTATCCATGAATCA
TCCTACCAGTGGGAGTGATGGGTAGTTGGCAAATTATAGGGCAAGAAAAAAGTTCAAAAC
ATACTTTAACTTCCCGTAGATGTTCTCAATCTGAAATTCTGAATTATTGTGTGCCTGACT
ATATTTATGTTGCACAAGCATCCCTTAACTGCTCAAAATATTCCATTAGAAATGGTGTAT
TTGAATCTATGATTGCCGGGCATCACTGTTAACAATTATAAGAAATGGTGTGTTTTCTCT
TCATTATTCTGGTGCATGCACTGTAGTGTATTGATTCCATCCTTTTTAGTTGTTTTTGCA
CATCATTTCTGTCAGCTGGATCTGCACAAATACCAACATTCCTGTTCGGTCTACCTTTTG
CTTAACAATAGTGGACGTGGACCATTTACCTTCATTTTCTTACCATGTTTCCAGGATAAG
ATGAACCCCACAGCTCATGATCAGACAACACAGCAACAAAAACAAAATGGCCGAAGAGCA
GTTGGTAGCTCGCAGACCTGGACAGTACGCGGCTCTTTCCTCCTTCATTTCACTCGGTCA
TCGTGAGCAAAACTATGTACTGACAAGCTCTATTTTCTACAGCGGTATGGTGTTCTGCTA
CCAAGCCAGCAGACACGGAAGCTAAAAGAATGGGTTCTAACTGATGAACAACAACAAGTA
GTCAATGCTAGTGGTCTTGGACATCTTGCTCTTACGACAGGATTTACCATTGACCGTTCC
TTGCTTACAGCCTTCTGTGAGAGATGGAACAATGAAACAAATACTGCACATTTCATGGGA
TTTGAAATGGCACCGTCTCTCCGTGATGTATCATATATTCTAGGAATTCCAGTGACTGGT
CATGTGGTGACGGCAGAACCCATCGGTGATGAAGCTGTGAATCGCATGTGCTTGCATTAC
TTAGGACAGAGCCCTGGAAGCGGAGAGCAACTATGTGGGTTGATCAGATTAACCTGGTTG
TACAGGAAATTCCATCAACTGCCAGAAAACCCCACCATCAATGACATTGCATTCAGCACC
CGAGCGTACCTTCTATATTTGGTTGGCTCCACCTTATTTCCCGACACAATGAGGGGATTT
GTATCCCCAAGATATCTACCACTTTTGGGGGATTTCAGGAGGATACATGAGTATGCTTGG
GGGGCTGCAGCCCTTGCTCATTTGTACAGAGGATTGTCTGTCGCGGTAACACCAAATGCT
ACTACCCAGTTTCTCGGCAGTGCAACTTTGCTCATGGTATTGTCTCTTGTGTATTTCTAT
TGTTATATCTCTAGCTTTGTACCATCTTGGTAACTGATTAGAGATTTGCCTTGTTATCTC
TAGCTTTGTGCCATCTTGTTCACTAATTAGAGATTTCCCTTGTTTCCACAAGGCTTGGAT
TTATGAGTATATTCCTTTGACTCAACCCCAACAAAAGAATCAGAACACGTTGCTGCCCCG
GGCATGTCGATGGAACTTTGGAGGAACAACACGTGGGCAGAGAAAGAAAGTTGTGGAATG
GAGAAAGGATTTCGAGCAGCTTCAGTTGTCCGATGCAAGTGCAAATTACCTACTCCCTCC
GTCACGGTTTAGNNNNNNNNNTTAAACTTGCGTGCGTTTTCAAAATAGACAAGGTTTAAG
ACGCGAAAGCAATTACTCTTATTAATTAGTACTAGTACTAGTCATGCATGCGCCCTCCCA
ATTTGCTGCTCA