Contig Data
morexGenes
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Map Locations of contig_2549832 (3852 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2549832

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38162 1 2527 bp MLOC_38162.1 Available Available LOC_Os12g06840.1, FRAME:+1, EVALUE:0.0, 13112.m00706 protein ATEXO70C2, putative, expressed





CDS Structure of MLOC_38162






Contig Sequence (3852 bp)

>contig_2549832 3852 assembly3_WGSMorex_rbca.fasta
GATAAATTTGTATGACATATACTCCAACTTCGTTTGGATGACATATACTGTAAATTTGTA
TGATAAATATTTTGCTGTCTATTTGAGATAAGTTTGTCTTTCAGTATACTGTTCACATAT
TCGTTTGGGTGACTGGTTGTCTTTTAGTATGAATTAGAAGGGGAGCAACCGAACACATAC
TATGCACACAGGGATTTCTATGAATGAGGAATGGTGGGGGTGGGTGACATGACGGGGATC
GCCCAATCCCTGGGAGGGTAGAATCCACACTTGGATTCTACCACCGAACGAAGCCTTAGG
TGTGTGTTGATGCCGGGCGTAGCAGAGACCCTTTCAAATGGTGGAGCATCCCGGCCCTCA
ACCTCCGACCTCTGTCTCCTCCATTCTCTCTCCACCTCTGCATGCCAACCCAGCAACGCG
CGCGGACCACCAACAACTATTGACCATTACGACGCGCCCCGCCCCGAGAGCCATTCTCTT
GCCGCAATTCGGCTCTTCCCAAGAAATGGACAGCCGGAATCAGGCACCGCAGAAGTCCAG
CAGCTTCTCCTCGGCCTCCAGCAACAAGGCCCGGGAGGTCGACCGCAACCTCTCCCTCGG
CACCCTCCGGCATGGCGACCACGACCGGAGGGGCTCCGCCGTCGCCACCTGGGACCAGAT
CAAGGAGGAATGCGAGGACGATGAGGAGGACGGCTGCGGCGGCCCGGGCGTGTCCGAGTT
GTCGGGGGAGATCGATGCCTTTATCGTGGGGCTGAACGGCGAAGCGCCGCTGAGCCTCCC
GGAGGCGACGCCGGAGAAGTTCGCCGCCGCCGTCGAGCTGCAGATCGTGCAGTCGGAGAA
CTCGCGGGATAAGTGGGCCAATGGCGAGCCGCCGGTGGTGCTTGCGGCCATCGCGCGCAT
TGCGGCCCTCGCGTCCGCGTTCGCCAAGAACCCGGAGGCCAGCAGCAAGTACGCCTCCGG
CGCGCACCGGGTCACCGCCGTGCTGCAGCGTTCCATGGCATTCCTCGAGGACGAGTTCCA
CGCGCTGCTCGAGCCCAAGGCGGACACCTGCAAGTTGATAAGGCGGCCGCCCTCGTTCGA
GCAAGGTGGACACGAGGCCGACCGGTGCGTCCTACGACCACCCGACACCGCCCCTGCAGC
GGCGGAGGCCAAACCACCGTACACGCCGGAGACCGTGGAGCGGCTCCGGTCCATCGCCGA
CGTCATGGTGGCCGCAGGTTACGTGACGGAGTGCACGCAGATGTTGCTGGTGGCACGCCG
GAACGCGTTCGACGCGTCGGTGCGCGCGCTCACGAGAAGGCGAGCATCGACGACGTCGTG
CGGATGACGTGGGAGACGCTGGAGACGGAGATCGTGACGTGGATCAAGGCGTTCAGGCAC
ACCATCAACGTGGGCCTCTCCACGGAGCACGAACTCTGCGGCCGCGTCTTCACCGGCCCC
CACGCCGGCGTCGGCAGGGGCGTCTTCGCCGACCTGGCCCGCTGCGTCATGCTCCACATG
CTCAACTTCACGGAGGCAGTGGCCATGACACGCCGCTCCGCCGAGAAGCTCTTCAAGGTG
CTCGACATGTACGAGGCCGTCCGCGACTCATCCCCCGTCATCGACGCCTTCCTGTGCGCC
TCCGCGGACGACGAACCCGCCGCCGACAAGAAGGGCAACGCCCTGGCAGACCTCAAGACC
GAGATCGCCGCCGCACGTTCCCGGATCGGCGAGTCGGCGGCCAGCATCTTCTGCGAACTG
GAGAGCTCCATCCGCGCGGACGCGGGCAGGCAGCCGGTCCCCGGCGGCGCCGTGCACCCG
CTGACCCGCTACGTGATGAACTACCTCAAGTACACGTGCGAATACAACAGCACGCTTGAG
CAGGTGTTCCGGGAGCACCGGCGGAGCGACGCCGTGGACGCGGAGGACAACAACCCGTTC
GCGGCGCAGCTGATGGAGGTGATGGAGCTCCTCCAGGGGAACCTGGAAGGGAAGTCGCGG
CTGTACAAGGATCCGGCCCTGAGCAGCATCTTCCTGATGAACAACGGGCGGTACATGCTG
CAGAAGATCCGTGGCTCGCCGGAGACGAACGCCATGTTGGGCGAGACGTGGGCGCGGAAG
CAGTCGACGAACCTGAGGCAGTACCACAAGAACTACCAGCGGGAGACGTGGAACCGGGTG
CTGACCCTGCTCCGCGATGACGGCGTGCTGACGGTGAAGGGGCACGTGCAGAAGCCGCTG
CTCAAGGAGCGGTTCAAGCAGTTCAACTCGGCCATGGACGAGATCCAGAGGACGCAGGGA
GCGTGGGTGGTGAGCGACGAGCAGCTGCAGTCGGAGCTCCGGGTTTCCATCGCCGCCGTG
GTGGTGCCGGCGTACCGGTCGTTCCTGGGGCGGTTCGCGCAGACGTTCAGCGCCGGGAGG
CAGGCGGAGAAGTACGTGAAGCTGAGCGCGGAGGACCTGGAGGGGATCATCGACGAGCTC
TTCGACGGTAACCCCTCGTCCATGAGTAGGAGGAGGACATGATAAATACAGTAATAAACC
CCAGCAACACCAATTGATCGATCCATTGTTTAAGTTTAAAGGGGGATCGGAGTAGCATTT
GACCGATCGAGCTAATTCTTGGTTTAAGAAATGTACTATTAAATCGTTTATCGTTTTTGT
CTTGTTTTTTGCTGATTATATTAAAGAACAGAGGTGATGTATTTACTTACTGCATTTCTC
AGGGCAGATAGATATATGTATATGTACTGTATCCATTAATCCATGTACTATTAATTAAAC
ATTTCTTTTTGCATTCGACGGTACTAATCCCTCGGTCCGGAATTACTTATCATGAAAATA
CATACAAATGGATATATCTAGTACTAAAATACATTTAGATACATCAATTACTACTATAAG
TATTTTTAGACTAATGGAGTATTAATTAAACCTAAAATCTGAATCAAATGTATTTTCGTA
GCCTCTTTGCTGGAGTATTACACATGCTGGAATTCATCAGCACTATTGCATTGTTTCCTT
TTATCGAGAAGAGAAAAAATCATGTCAAGAACGTGCAGGTCAATTTCTTGCATTTTAGTT
TTCTCAACAAATATATGACCAAACGTCGACCTTGTCAACAATGGAAATTGTGAAAGGATC
TGATGAACGGCACACAATATACCTCTCACACACACACGCGCGTGTGTAAAGAAAATCTCA
TCGACGTAACACATTGGCGTCATCATCATCGCTTCTCTCCGAATAAGTGTCATCGACATC
CCTTCTCCCTCGACAAGCGACTCCCATTTCACCGCACACGAGCACCAACTCCCCCCTCTC
GATGCTAAATTCGGCTCGACTTGAGTAGTGTGCCACGAGCAGTGGATCTTGAATCAACGA
GTAAGAGGAGAAAGGGGAGACGATGTTTATCCAGGTTCGGACCCTTTCGAGGAGGTAAAA
CCATACATCCTCCTTTGATATATTGAGGTGAGGTGGTATCAAGTACAAGGAGATCTATCT
CGAGATCATATGAGTATGCTGTAAGCCCTAAGGTGTATATGTGTGTGTCTATGGACCTAA
ACCCTTGGCTTATATAGACATCGGGGGTACCTAGGTTCACATAAGATCGATTGCCAACTA
AGGATAAACATGTTGGATACAAAATCTCTCCTTGAAGTACACGCCAAGTTTTCAGTGGCT
TCCATCTTGCTAATGACGAGACCCGCGACTTTGGTTGTCCTCTAGGCAGTTGGTCAAGTG
GGCCCTAGTTCGGCCCGTGAAGCCACAAGAATATATATGCCAGTTCCTCAGCTACCCGCA
CCGAGGGTAACGTCGCCCCGATTCTGAGGACAACTACGAAGGAGAACTATTGAAAGCACA
TATGCTCCCTTG