Contig Data
morexGenes
Links



Map Locations of contig_2549803 (8143 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2549803

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38147 1 1377 bp AK365021 Available Available None
MLOC_38148 3 1799 bp MLOC_38148.3 Available Available LOC_Os05g12450.1, FRAME:-2, EVALUE:7e-171, 13105.m01353 protein hydroquinone glucosyltransferase, putative, expressed





CDS Structure of MLOC_38147






CDS Structure of MLOC_38148






Contig Sequence (8143 bp)

>contig_2549803 8143 assembly3_WGSMorex_rbca.fasta
CGCGGTCGCACGCACGGAAGCCCGTGAGGCCCCCCGAACCCCGCGCCCGGGCGGCCTCCC
CCGCTGCCGCTGCCTCACAAGACGAGGCCGCCCGTCACTCCGGTGCCGACGCAGCACATC
CGGCTGGCCTCGCGCTCCTCGTTCAGCGACAAGGTGCGCAAGAACCCCGATGTCCTCGTC
GGGATCGCCAGGGAGATCGCTGCGCTCCCGCCGGAGTCCGGTGTGTGCAAAGTGCTGGAC
CGTTGGGTCCACTTCCTCCGGAAAGGCTCCCTGTCCATGACCATCCGGGAGCTCGGGCAC
ATGGGACTTCCCGAGAGGGCGCTCCAGACGTTGTGTTGGGCGCAGGGTCAGAAGGCCGTG
CTGCTGTTCCCTGATGACAGGATCCTCGCTTCGACAATCGAGGTCTTGGCGCGCTTCGAC
GAGCTGAAGATGGAGTCTGCGCTTGAGGAGTGCGTCCCCTCCGCGAGCCGCGCCGTCCTT
GAAGCCATGACGAGGGGGTTCATCAGGGCAGGCAAAGTAGGCCTGGCACGCAAGCTCCTT
GAACTTGCCAAGATGAACAAGAGGACACTGCACCCTAGCATCTACGCGAAGCTGATTCTG
GAGGTTGCCCGGACACCTGAAGGCTATGGGCTCGCTGCTGCACTGCTCGATGAGCTCGGC
GAGAGGCTAGACTTTGACCTGCGACCGCAGGACTGCACAGCTGTCATGAAGGTCTGCATA
AAGCTCAGGCGGTACGCAGCCGTGGAGAGTCTGTTCAGCTGGTTCAGAGGGTCTGGCGGG
AACCCAAATGTTGTGATGTACACTACAGTGATCCACAGCCGCTCCCGTGATGGGAGGCAC
CGAGAGGCGCTGGCCCTCGTTTGGGAAATGGAACAGGCAAACTGTCTTCTTGACCTGCCG
GCGTACCGGGTCATCGTGAAGCTGTGTGTGGCATTGGGTGATCCAGAAAGGGCTTTTCGG
TACCTGACGAGGTTGAAGGAGGCTGGATTCGTTCCGACCAGTGACATATACTGTAATTTG
ATTGAAGGCTATGCCGCAGCGGGGAGGATGGCCAGGTGCCGGCAGCTGATCAGGGAGGCT
GAGTCAATCGGCGTGTTGCTGGATAAGAGGCTGATTTCAAGCTTGTCTGAGATGGGTCAT
AGACGTCCTTGAACCACTGGAAGTAAAAGTATGTGCTTGTGTAATTATCTAGAGGAGGTA
AGACGAGTGGGTTTCTTTTATGTGTTCTTTTCTTAGCTGTTCCATGCTACACGGGTGTAT
TTGTGATGCTTCATACCGAAATCTGTTGTCCTGAATCGCTTTAACCTGTAAGATTGTGGA
TAGTTTAAATTGCTAGCAGTTCCAAATATTTCTTTCTTTCTCTGAACAGTTTGTTAACGA
ATCCATGTACATTGTGTTTGTTGATATCAGGACTAATCTAAACAGATAACTTGGCGTATT
CTGAGTTTAGTGAGGTCCATATTAAGGGGCTTCTTGGAAATTGACAAGGAGTCACATGTT
TGATCATATTTTATCCTTCTTAAATGAGCTGAATTGTTCTCTGCATACAAGGGCACACTC
ATGTAATAGGCTTAATTCACATTACTGGCTAACCATATTTTACAAATTTTATAACAGTGC
AGACTCTATGTGTCATCGTGAAATTTTTATGCGTGGGTCTATGCAGAGCAAATGATATCC
TCCTCCCTGTATATATTTTCTATTTGAATGACTCTCAGTTTTGTTCTTGATTTGATGGTA
CTGGTGCTAGCTAACTGTTAAGATATTGTTACATCGTTGTTACAACTACCAAGCTTGATT
ATGATCCAGTTGATGATCACCACGATGCTTCATCAGCTACTCAATCGTCGACGCCTCTAC
CTCGGTACTATTTTTGAATCGTCTAAGTTTTGTCCTCAGAATTTTTAGACAATGTCTGTT
TTTTTCTCAGGAAAGGTCTATGATATTGGTAAATGGGGTTTACAAAACTGATGTAGTTAA
TATTTTGTTGCTCTTTTAAAATCTGATGGTACATTTTTGCCATCTGAACAGAAAGTTGAT
AAAAGAAAATTTGACTGGGAAACTGTTAAGCTTGGTAGTGCACTTACAAGACCATAAGGG
ACTTAATCATGGGCAAGGAACTGAAAGTAGACTTTTTTGGAAGAGCAGTGATATGATTTC
CCCAAGAGCAGCTCCCATTATCGTCTTCTGCTGTGTTGGTCTGAATGTTCTGAAGAATAC
GTCTGAAGATAAGGAAATCATCTAAGGAGCAGCAGCTGGAACGGATCCTGGGGGTCATCA
AGTTCTATATAGCGCCTTCTTGACAGTTACTGAGTCATTCATAGCAGCAGAGTGATGTAT
TGGGAGGAGCTGCTTAAGGTAAGAGAGGTCAACCCATTCCAGTTGTCTAGTCCAGCCATG
GATGGTCTTCCTCTGATGGAAGAAGTGGCAAAGTTAATGAATTTGTCTTGCAGTTTGATC
ACATCTCTCCACCGCAAAAGTACCACACTTAGCGCATTCTTCCCGTCTTTGCAGCGGTAT
ATCTCCTAGAAACATGGGGGAGAATTTTCGAGTAAGGACTTGCATCCATTCTTCTCAGAT
TTCATGCTTGACTGCTTGAGTATATAGATATACGTGCCACAAATACAGATTTGAGATTTT
GATGTTACCACAAAAAGAGATATATTAGTGGAGGATATTAGTGTCATGTTCCTTAACGGG
CGTGGAGAAAAAGTTAGAGCTTAGTAATCAGATAATAATGATGGTCAGAGAAGAGGAAGA
CGATTGGTTAGCATATACTCCCTCTGTACCATAATATTTGTTGTTGGGAGAACTAATCTA
GTTCTCTTCTCCCCAACAACAAATATTTAGGAACAGAGGAAGTACATGTGTAGCTGCACA
TGTAGAACATAGCAGATAAGAATCTATGTACAATATAAGTCAGATTCAGGACTTTGTATG
ATAGCTAAAAAGCCACATATCTGATTTTTTTAGAGATTTGTTCAGGAATTGTTTTTTTGT
CTGAACAAGACACATATCTGAAGATTTAGTATTGACTTACACCTTGGAGTCTACATCTGT
TGTGGTGTTCCTCTGTTCTAAACGCCATGTTTGCATGTTTATTTGATCTAGGTGTATAGG
TAAGTGCTAAACTGAACCGTGCTAATTTGATCATGTTTGCATATGCATATAGCCAAAAGT
TTGAGTGACGGTTATGTTCCAGTTGCATTTATATTCAGATTTGATAGAAGAAATAAAGTT
CCAGGAAAAAACAAGCTTTTAGTGTGTTCCTTGAAGTTATACACCTGAGCACCCCTACTG
TTATGTTAGCATCAAAATTAGCATTATTCTTGGCATCTGGGCCGGGCCGGCAAAATTCAA
GGCCCTGTGCCAAACTCTACATTGCGGCCTATTTCCTTAGAAAAATCTAACTATAATCAG
TTTATCTACAACTCCTTTATGATATTGAATTAAATCTTCTAATTTTAATTTCCTTCTCAT
GTCTTGTAAATAGATTCATATTCTCTTGAGGACATAACTTGGATCTTGAAACACAACGTC
TAGACCAATTAATATATAAGTATATAAATGATTATTTGATTATTTGATTGACAGAGGGCA
GAATAAGAGCAAACTGAACCATGAAATTTTAGAATCAGAAAGTAGGCATAGGACCTCACT
ATCGTTCCTGGAGGGATATTTAGGCCTGCATCTTGATAGATAAATTAGTTCCTGTTTTTG
TTTCTTCCAAGTTCATTGATCTGTTTATAAGCTGCGACGGAGCTGGCTAGCTGGTCTGAC
CATTTTGGTGTGCCTTGTCCAACTCGACCAACTCACGGTGCCTTGTCCAACTCACAGGTG
CGATTATATATTAACCTACCGTAAAACATACTCTCTCCGCAAACTTCTATAAGACGTTTT
AGGTCACTACGATCTAAAATGTACTCCCTCCGTCCGAAAATACTTGTCATATGAATGAAT
GTATCTTAATGTATTTTAGTTCTAGATACATTCATTTTATTAATTTGTGCGATAAATGAT
TCTGGATGGAGGGAGTAAAAGTTAACAGAGGAAGTACTATTTCCCTTGCTGCGTAAGCAA
ACCCGCTAGAAAATTTGTATTCCTGCGATTTACTTCGGGCCACAGGAAAATAGGTCACAG
ATGGAGAGAAAAAAAGTTCAGTTTCTAGTTTCTAGTGGTGCATTATTTTGTTTAGTCCTG
AGCGCGAGATCTAAAGCTAGTCTCGAGTAGATGCGAAAATATATTTTACTTACACCCATA
TCCCATTGTTGCATGGTCCATGTGCACAGTCTCGGCAATCCCATCAGTGTGCTAGCAGCC
ACCATGACACCACGATCATCGTCCACCGCAGTTATGAAACACAATATGCTAAATATAGAG
ATTCATACTCATGATATACTAGTACTCAAATTTGCTTGGAACTTTCGTAATGGCATAATC
ATCAGATAAGGGATGCTAGAGGCATACAGATCTTACATAGACAAGTGCACAACTATATCC
ATGCTAATTTGTTGACGATGACTACTACATCAAGATGATGTACTCGTCGAGCTCGATAGC
TTTGGCATGTGGTTCCGCATGTTCCTCGTCAATGACGTCCATGGAGGGTGCCTGCAGCTC
TGAACTGAACAAACAAATAAATGAGGGGATCTGAGAGAGCCCATAGAGGCAAGTTCAAAC
ACCACTTATGTATTTACCTCTTTATTTTCCCTCACTAGGAGTAGTAGAAGATTTCCACAC
ATCCGTGACCTTGGCTAGTGTAAGAGTTGAAGAACCATGCATTGTCAGCGCATGCGTGGC
CCTGTCTCTGAGCTCACCAACACGCCTCCTCATCGTCGTCGCTTCGTCGCCATCCATCAC
GCGTCGGATCACGCTCACAATCTCTTCCTTGCACACAAAGCCGGCGGCGTTAACGCGGGC
CGCCACCCCTGCGTGGGCCTCCAGCATGGCGGCGTTCATCTTCTGCTCGGCGTAGAGCGG
CCATGCCACCATCGGCACCCCGTTGAGGATGCTCTCCAGGCTCGAGTTCCACCCGCAGTG
CGTCACGAAGCAGCCGACGGCGGCGTGCGCGAGGATCGCCGTCTGCGGTGCCCACGACAA
GAGGACGAGCCCCGCCCCCGACGTCCTCTCGACGAAGCCCCTCGGCAGGAAGCCGAGCGG
GTCGTCGTCGTCGTCTCCTCGTCGTCCGGTCCCGAAGAAGGCGCCGTCTGCCGTGTTCTC
GTGTGGCCTCTTCGCCGCCCAGACGAACGGACGCCCCGTCGCCTCCAGCGCGAGCGCTAG
CTCGGTCGTCTGCCGCCGCGTGAGCGTGCCGCCGCTCCCGAATGACAGGAACACCACGGA
ACCGCGTGGCTTCTGGTCCAGCCATGCGATGAGACGTGCGTGCTCCGGCTCCCGGTTCAC
GCCGAACGGCCGTGTCCAGACCAACGGCCCGACCGCGTGCACCGGCATGCCCTTCACGCA
GTCCGTGCCGCCTTCGCCCACCGCCGGCTCTAGATCACGGAACGTGTTCACGAGGATCCC
GTCGACCCTCGACGCGTCCTTGGCCAAGGACAGGAACCCGGCGTACGTCTCGCTGCTCCG
GTCCGCGAGCAGGGACCCGGGAAGCTCGCGCGCGTGGATCGGCACGCAGCCCGGCAGCCG
GATCGGCTCCGTCGCGTCCCGGTACTCCCCGACGAGCCCCGCGTCGAGCTCCGGGAGGTG
CAGGAACAGGGACAGGAGCATCCACGGCGAGGTGAAGAACATGTAGCACGGCACGCCCAG
CTCCGTCGCGACGTCGCGCGCCGGCACGCTGGCCATGTCCACCACCAATGCGGTGAGCGG
CCCAGTCGAGGTTAATGACCGGGCGATGTCCCGGACGCGCGGGACAGCCGAGACGGCGGC
GTGCAAGACGCGTTCCCGCACGGGGGTTGAGGGCGGCAGGGCGTCCGCCGGCGGCGCGGG
CAGCACGACGAGGTCGACGCCGTCGGGCACGGACGAGGCCAGGGCGGCGTAGTGCTCGGA
GGGAGCATCCATGGCCGCGGCGAAGAGGATCGTGGCGGCCAGGCCGTGGTCCGCGACGAG
CCGGCGCGCCAGCTCGGCGAAAGGGATGAGGTGCCCCATGCACGGGCTGCACAGGAGCAG
CACGTGTGGCCGCGCGCTCGCCGGCGACGGCTCCTGGTGACCTGACTCGCCTCCCATGGC
TCCGTACGTGGTGATTCGCCGATGATCGAGCGGTCGGCGGCCAAGGAGAGTGTTTGTTGT
GTTTTGGTTGTTGTTGCCACTCTCCGGGCTTGGGCTTGGAATGCAGTCTCATACGTAAGT
TTTTGTAGTTGCCTCACTTGGCTGTATACGACGCTAGTATAAATTAGAGCATCTCTTCTA
TATGTAGTACTTATGTCGTATATATACGGGTACAAGCCAAATTTGGCATCTCGAGGAGGT
AACTGTTAGTTTGCTAAGAGCACCTCGAGGAGGTAACCGTTATTCACAAGGAAAGTTTTC
TATGGTTATTGTCAGCATCTCGAAATCACATGCCTCAACAACCAAGATTAGCAATAGGAG
CATCTTCAATATATGATGCAAATTTGAACATTTAAAAATAGGTGTTGTATAATTTATATC
AACAAAAATGTGTTTTTAAATTTTTAAAAATGTTTCAACTCCAACAGATGATGTATAGTT
GGTGATGTAAAACTCTTACTTCAACAGATGATGTATTTGAAGAGTGTTTTTTCTATCCGA
TAGGCTGAGACTGGGAGATTCCTGCAGTACATGCCCGTTCAACGAAGGAAACTGTGCATA
TTTCAATAGGCAGTACACAACCACAGGCAATTCGTATGTCTGTTCATGTCCGAAATAGTA
TCGATCAATACTTTGCCTGGGACCCATCTACAAACGTTTTTGTCGGACAAGTATTTTTTA
ATTGAAATGTATAAATCAAGTTGTCTGAGCTTCACATTGGACATTAACAAAAGGACTAAC
AAATACGATGGTAAATCATATAAATATATAAGTTGTGGATATGTTTCCATATGCGTACGT
ACTCAACATTTGTGAACATTGATACGACGAATCAGACATATATACACGCTGGCGGCCAAA
CTCTAAGTAAGTTCTGTCACAAATACTAATCAAACTATCTCAGGGTAACGTTCAGCAATA
CTGATGCATCCACTCGCAAAAGCAATTATTCAGTTCTGAAATAACGTCCAACTACTATTA
TGGATCGTCCCATCTACATTGCATAATCTTCTGAAATGAGGTTATACTTCTTTGGCAGCA
TTGTGTTGTTGGTTTTAATTTATCGACAATATACCCCATAGATCTTTTCCTCTCATTTCT
GAGAGTGCTACCTGCATGATAAAAATAAACGCGTCAGTTAATATATTGTTTACCGGCATG
CCTCATTGTTGCAATTTTTATTTTGAAGCGTTCATTGTTAAGTGGAGTTGCTACTCCTCC
CTGCCCATTGTAGTGTAGAGCACAATACATGGCATGCATAGCTGGATTTCCCTATCAAAC
ATACTTGTTATGCCAACATACTTACCAAAAAACATATGACATGCTTAATTTCTATGCCTA
CCCTTGTCTAGCGTACCTTGAGCATTTACTGCATACCGCATCCATGATCTTTATAGGCCA
AGTTTGTTCTGGCCATTCCCATGTCGGGTAAAATGTTTGAATGCACTTTGTTTATCACAC
GATGTAAATCAGATATTGTCCCAAAATGCAAATTGCTCACATCATTTTTGTGAGCCCCAA
ATTTGTTATGTCGGTGCGCTCGAGAAGAAAGTTCGGCGACGGAAGTGCAGTGGGACGGAA
TCAAATCGGAGGCTCCTCGGCGGCTACGCCGGTGCAGCGGGCGACGGTGATGCACGGTTC
GTGGGTCGTCGATGCACAGACGAACGACAACAGTGTATCCAGCCAGAAATCACTGACGGA
GATAGGCGAGCGTCGGGTGGGCTGGGGGAGTGAAATGAAGAGGTGGTTGATGGTTCACGT
GCGACTGGAGTTTTACATCATATGGGTGTTGGAAATATGCCCTAGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTACATGTGTGGATACATAGAAAAACATT