Contig Data
morexGenes
Links



Map Locations of contig_2549666 (5232 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2549666

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38086 3 1456 bp AK376303 Available Available None





CDS Structure of MLOC_38086






Contig Sequence (5232 bp)

>contig_2549666 5232 assembly3_WGSMorex_rbca.fasta
TAGGAACGGAGGGAGTACTATTTATGTCTAGAACAAAATAATCTTTACAGAGCTTCACAA
GCACAATTCTCGATAAAAATAAATTTTAGTTAGCAAGTTAATTGGCGCTCATTGCAGAAT
TGGCGAGTGAGAAATAAGAGTCATCACATAATTCTCACGAAATGGTTTCCTTCATATCAT
GAGGTTGTGATACGCTCAAAATGCTTCAGGGTCCATGCTTATGAGTAGGGAATAGCAAAA
CATATCTCCAAACTGGAATGAAAACTCCAGGGGCTGGCAAGCAATAAATAGGATATGAAT
GGGTAATATAATCCAAAGATGGACCAAAATTTTGTCGAAATATGCAGGGGAACTATTCCG
AAGAACAATCTGTAAAATGTAAAAGGGAGTTTATCTTAATGTGGGTATGAGATCAATATG
AGAATTTTGGTTATCTGTTAAAACATTCACAAGGCGATGTGTTCCAGTGAAAGAGATGAA
GTTCATGGGTTAATAAGCATCTTGACACTTCATCAAACAAAAGCATGAAAGGAGGTGAAT
TCAAGACCTACCACAGAATCTGAATCATCTTCAGAAAGGGTTTTCAGATATGCAAATCCA
GCAGAAAGGCTGAGCACAGATTGCACAGAAATATATAGACCAGGGACATTAAAGGTCTCA
AACATAATTTCTCCCATACATTCACGACTTTCAGGCGTACTGACAGGACTATCTGTAAGT
AGGAAGTAGTGTTCCTCAGGATTGCAGCGTAGATAATTGAAAATGGATTGCTGCCAAAAT
CTCTCCATTGTATCCCAGTCATTCACCTGGAGAGCAGGGAAAAGGACATGACATAGTGGC
ATGGTGCACCCCGAAGGACAATATTACAAACAGAAAATATATATGCATACCTGACCATGG
CGAATTGGGCTTCTTAAACTGTACAGGCCACTAGATTTGAAATGTGACAGAGCCTCGTCC
CCGATAAAAAAATCAAGATCAGCCATGACACCTGCATTATACTGTGCTAACCAATTTGCA
CTACTGCACTGCTCTGATTGGTCCAAGAAAGATTCATTCACAGCTACTACAGTAGGGATG
GTGAAAGACGGCTCGGAGTTACCAGCAAACCCAAGTTTGCTATACCTAAACATGAGAGCA
TACAGATTATGTAAGGACACGGTGTGATGAGCTAATAGAGCAAATTTTACAAGTGACATG
CATATGGAAATTTTCAAGCGGCTTTGAAGAAACCAAAACAATCCGGCTTCAAGAGAAAAA
CAGTAATTTCCTGTCTTCTATCGCAGTCTGTTAGCGATTGTCGTTTTTATGTTTCACGGA
ACACACATAGTGCATCAGTTAAGACATGTTATAGTACTTCGTAATAGTCTACAGTGTAAC
AGTAACGATAAATTTGAGCTAAAGCACTTGAACACCACTATTAGCTATAATCCCGAAAAA
GTAGCAGTCCCTAGATTTTCCGTTGGTAGCTCCAACCATTAACCAGACAGATATTGCCTT
ACCGCTGGCAGCGTGGATTTAAAGACAAACCAAAAATGAATGGGCCAACACCTAGTTCAA
CCAATGATGAAATAAAGATAAGCCATGGAAAGTCCATTCTACTGTAGAAAAAAAAAATCA
AACACGCATAGAAATTCGTGTCATTTCAGGTTCAGGTTCAACATACTCTAGAACGCTCTA
GCTACCAATGTGAATGTTGGCTCGCAATTAGGGAGCAAGCCTCACGGCAGTCGTTGGTGG
TGATCCATGTCCCATTGGCTAACGAAATGCATTTATTTCCACGGCAGTCGGTAATCCGAT
CCGACCTGCCCCAGTTCACCTCCCAGCGCGGTCAGCGGGAACACACGGGCACGCATACGC
ACTCAGGGACCCGCACAAACGTAAGGAAAAAAAAACCTAGCTACTGCGCAGTCGCAGGAT
CGGACGGGGAGATTCGGAGCTGTACCCTGTGCCGTTGTCGAACACGACGGCGGGGCGCTC
GGAGGGGTCCATGGCGGGCGGCGTGAGCGGCTCCGGCGATTCCCCGCCGGCTCATATCTC
GTCCGCAGCCGCCCGGAGAAGCATGGGTGGTCGAGGGCTGCCGCGATCGGTCGGCTGAAT
CGGCGGGGAGGAAGGCGCGGACGCGGCCGCGGCTGCCGCTGCGCAGTCGGTCGGCAGGGG
GATCGATCCCCGCAGGGTGGGTGGGGGGTTTGGGACGCGATTGGCGAGGAGAAAGAAGGC
TCGGGAGATTGGGGAAGTGGGAGGAGGGGCGTGCTTGATTTGGTTGACGAGGGAAGCGGG
AAGGAAGGGAGCACTTGCAGGGGAGGGGGAGCCTCGGTTGCCGTGGCGTGGTCGGAGTCT
CGGAGATGGAGGCGCACTAGCGTAGTAGGTTGTCTGTTGGGTTCAGTTGGTCCGCACTTG
CTCAGATCGTGGATCGAACCAAACCACAGCACACACTTTAAATTTCTGAGTATACGGATT
TAGGTTTATTTTGTCAGCTCTACTCAGACCGGACCGGACCGGCCATTGTTTGTTGGGTTC
AGTTGGTCCGAGCTCTACTCAGACCAGACCGGACCGGCCATTGTCTGTTGGGTTCAGTTG
GTCCGCACTTGCTCGGATCGTGGATGGAACCAAACCATAGCACACACTCTAAATTTCCGA
GTATATAGATTTAGGTTTGTTTTGTCAGCTCTACTCGGACCGGACCGGCCATTGTCTGTT
GGGTTCAGTTGGTCCGCACTTGCTCGGATCGTGGATCGAACCAAACCACATCACACACTC
TAAATTTCCGAGTATACAAATTTAGGTTTATTTTGTCAGCTCTACTCGGACCGGACCGCC
CCGGCCCGGCCCGTAAATAGTTTACAGTGGCCCGCAAACATACCATGCGCGATACGTATG
CGGATCCGCGAGTTTGATCTTCCTCCACCGTCGTCGTGATTCTTCATTTCTCTCCTTCAT
TTCTCACGTCGGTGTCTAAAATCCGTCGCACGCCCACCGATCCGTGGGATGTGGAGATCC
GACAAGTGCGGTGAGGATGACCCCGACGGAAGCGTTGCGTCAAAGCCGACGTGACGCGGA
AGCGTTCTGCCCTACGATACACAAATTGCAGACTCACGTCGTGTAGGATCGAAAGTATGC
CTGAAGGGAGTGATGATGAGGACAAGGCTACCTTCGATATGATCACAAATATTACACGTG
TGTATTTATTTAAGGTGATTCTTAATAAAAGTTATGCAATAATATATTTATGCTATATAG
AAACAAAAGTATTTTATCTTTTTTTATTTTGGTCCTAATTGCAGAACTATCAGACACTTG
TATAATTCACATATGAAGATAAGGGAAAAATAGACGTTTAGGTGTTGTTTAAGAAGTTCT
CTCACGTTACTTTTAGACCAAGAGAAGATAGAGTCCAAGTCTCTCACGTTCTGAATTTAG
ATTCGGACTGCACATACATACCTGTCTCAAAACGTCAAGAACTTTTACATATGGACTTCA
AATTGGATGATTCTTTTTTGTTGGAAAGTAGATTTTATGTACGTTCCAACCCAGTTATGA
TCACCTTTAAATTCGTCCGGAGCATGGAGATATTGACGAAACAATCTGACGTTCCATTAG
AATCCGAGTCAAACTATAAGTCCAAAGGTATTGCATCACCTCCACTTGGATCCATAGAAA
TTGTATGACCTAGGGTTAGTTTTAGCTTGCCTTTAGACGTCCTCCCACATCCTTGGCTGA
CACCCCTTACTCCTATATAAGTAGATCAATCTAGTAAAAAATTGGGGATTTGTTTATTTA
AAAGTTAGCCATTGCAACTTTGTGTACTTCGTTTGTGTCCAACGACCAGACCAAGACCGC
TTTCGGATCCTCACCTTTATCAATACTTTATCTATATTCGCAATATTCAGATTGCTTTAT
CATATTCTTGTTTGTTCTTTGATTGCTTGTAGGAAGACCTTCGTGGTCAGGTTGATCGTG
CGCCGACGTGGTCAATAACCTCCTAGAGATTGGTTTAGCGATTGCTAAGGCGCAACGTCG
TCCACGTTTATAGTCGGGTCATGAAAGTCGCTTCCACCAAATCAATAGCTATCATCTCAT
CAAAAGGTCGGGACCCTCGCTTCTATCAAGTGGTATCAGTTTCCAGGTTGCTCAGTGAGA
ATTTCCAGTTATTCCTATATTAGATTTATTTTTCTTCCCTATTGTCCAAGTAAAAGCCAC
AAAAAGAGTTAGATCTATTCATCCTTTGTCCAAGCCAGTGTGATCCTTTGCAAATTTCTT
TTTAATGCTTGCATAGTTGAATTATCGGTTGCATCGTCCTGTCAAGTTGCTGGTCCTAGT
ATTTAGTTCCTTTAGAGTTTTGAGTTCTGTTCACATTAGTCGCACCACCGCTGCATCATC
ACCCGTTTTGTTGTTGTTCACCACCATCCATCAATTTCCATCACGTGCTTTCATTGTTTA
TTGTCATTATCAGACTTGAGGTCATTTGCATCTACGCTTGACCTGATTTGCATCTTATCT
CGTTTGTTGAATGAAAGAAAAAAGAACAAAAACTATAAAAAAAGTGAGAGAGAGAAAAAA
AAGGGATAAGAAAAAATAGTGAAAAAAGGAGAAAAGAGAAAAAAAACAAATTTCGGATCT
ACCTAGATTCAATCTCGTATTTGAATTTGGATTGGAATATGTTTTGCCCATGTTCAGTAA
AACATGCATATCTTTCTCATACGAAGTCCGTTTTAGATCCACGGGTACTCAAATTCAAGG
TATCGACGAGACGCATCTGAATACTTAATCAAGAAAGTTAATTATTCTCACTTCTAAATC
GGCTTATAAATAGGACTTTTTGTCCTACAAAGTTTGGGAACACAATTTACCAATAATTTC
TAGGTATGTTTGCAAAAACTTTGACTCCTCATATTAACTCAGAATTGAGTGATTCTTTTT
TGCATTGGAAAGCTTGAGTCAGTAGAATTCTTGAAAAAAATGAAAATTTTGACATAATAT
TTTCTAGAGGAAATTTGCACAGAGAATTTTGGTATATCCTACTTGAGAGTCATTTGTTAT
CATTATCTTTACTGTCATTGTGATCTTCACTTATATCTTGCTATCTAGAGCTACTTCGTA
TCATCCGTTGCTGTTATTTGTACTTTGTCATGACTCCATTAGTGTTCTAGACTCTCGTCT
CTAGTATGGTCTAGCCTAGGACCAGCACAGTANNNNNNNNNNNNNTTTATTCAACATTGC
ATCTCTGAATTG