Contig Data
morexGenes
Links



Map Locations of contig_2549661 (3897 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_2549661

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38080 1 638 bp AK250510.1 Available Available None





CDS Structure of MLOC_38080






Contig Sequence (3897 bp)

>contig_2549661 3897 assembly3_WGSMorex_rbca.fasta
CCGCCGCCGCGTCGGGCCTCATCGCCTTGCTCAGGTCCTGCATCCTGAACTGCTGCGCCG
CCTGCGCCTGCAGCTGCGAGCTCAGGTCCTCGATCTTGGCCTCCCCGAATATCACGTACG
TCTCCGACGTCGGGCTCTTGAACACGTCCGGCTTCGACACCACGAACAGGATCTGAACCC
CAAGGTTTAATCAACAACACGCATGAATGAATTATTTAATAACCTCAACAATCTATCTAC
ATATACATATATACACACACAGATAGAAGAATTGCTTCTTACGTTCTTGGCTCTCTTGAT
GGTAATCCTGCTGACGCCGGTGACGGGCTTCATCCCGAGCTTCATCATGGCCTTGCGGCT
CTTCTTCTCGCTCCGGCTCTGCTTCGACCCCTCGCTCCCGGCCACACCCAGCTCGCCTTC
ACGCACACCAAAACTACAAGTCAGACGCACGCACGTACGTACTCCCACTCCCTCGCCGCA
AATCTACTTCATCTACCACCACGCACCCATAACAACTAACTAATTCAACGTTACACGACC
GCTCATTCCCGATAGCTAGAATTACAGTGCAAAAGCACATCATTTCCGAGATGCTGCACC
AACTATCTAACATTCATTCCTAAACAGCGGAACCTACACGGTCACACAGTAAGTGTGACC
GGAAGAAGACAGAACGAGGTGAGAATGCAAAAGGGAGCAGGGGGTGATGGTTAACTACCG
TCTTCATCCTCGTCGTCCTCTTCATCATCCTCGTCCTCCTCCTCGTCTTCGTCACCGTCG
CCCTCCTTGACGTCCTCGACGACGGGCGCCCCGTCCTCCGCGGGCTCCTCGGCCTTGACG
ACAGGCGCCGCGTCGACGCTCTCCAGCTCCGGCTCGGTGGTCACCGGCGTCTGCTCGCTG
ACCATGGTGCTGGTGCAGGAACGAGCGTGCTGCTGGAGTGAGGATAAGGAGTCGGAATGG
AGAGCCGAGGCCGGTTGTGAGCGTCGCCGGAGGCCTTATCTATCCGCTTGCGCTGTGTTG
TGGGCTGGGCTGCCTTACCGTTGCTTCGGTACTACACTACACTACAACTCGGCCTTGCAC
AGGGAATCTCCTATTTGCCGCTTTATGCGCCAAGTAGTCGAGGCTCCGCACAGGTGACCA
AGGGATCGTTCTAACTGGACTAGCCCATTCAAATGGAACATCTCCAGGCGGTTTTGCTTG
TTTTGAAAGCCTTCTAGAGATTTTTAGCCAGTTTTCTCTGATTTTGGAAAACTTTTAAAA
GGTTCTTTGTACCGTTTTTTATTCGTTTTTCTTTTTCCTTTTCTATTTTCTGTTTCTGTT
TCGAAAATTGTTTTGGGTTTTCAAAAATTGTTCTTCAAATTTAACAAATGTTTTTGCTTT
TTTTTAAAATGTTCTAAATTTTAAAATAGGTGCCTTTTTTTCAAAAACATTCATAACTTC
AAAAGATGTTCAGGACTTTCAGAAAATGTTTGGTATTTTCGAAAGATGTCCGGGACTTTC
AGAAAAAGTTCGATTTTTTAAGAAACTTTTTGGTATTTTTAAAAAATGTTTGGTATTTTC
AAAAAATGTTCGAATATCAAAATTTTGTTAAATTTTTAAACTAAGTTTGTGTCTGAAAAT
TGTTCTTAAATTTCGAAAAATGTTCCTGCTTTTAGAAAATGTTACAAATTTCAAAAATTG
TTGGTTTTCAAATTTTGTTCATAAATTCAAAAAATGTTATGGATTTTCAAAAATGTTCTT
CAGATTCAAAAAATGACTTTGCTTTTTTAAAAAACATTCTAATTTTCAACTAAGTTCGTG
TTTAAAATCGTTCTTAAATTTCGAATTTTTGTTGCTTTTAAAAATTGTTCCGAATTTTTT
TAAAATGCCATTTTTTCAAACACTGTTCATAAACTTAAAAAATGTGCTTCAAATTCGAAA
AATGTTTTGCTTCAAATTCGAAAAGAAAAGGAAAAAGGAAAGAAAAAACGAACCAAAAAA
GGATATAAACAGAAAAGGAAAAAAGGAACAGAAAAAAGGAATATATCAGATTTCCTTAAG
ACAAAAAAAAACTGGGCCGGCCTAGTCAGGTGACACCCCGTGTGCGTCCGCTCGGCAGTT
CGCTGCAACGAACGGCGCATAGGAGGTCCCCTTGCATGGGTGGACACTTGAACAGAGTTA
GCCGCAAAAAAAATGACAAAACGAAATGTTCCAAAAGTATCGCGGGCATTTTCAACATCG
ACTTGCAAATTTACTCCCGTAGCCGTGTGCGGATACGGGACCAATCTGCGGATAAGATGG
AAGCCGACCATCCAAAGCTATCTGCATACAATTCAAACAATCGTTTAAACATATCGAACG
GAATTCATGCAAACCCGTTGATTTTCATATAAACAGAAGCACATTCATTACAATTCACAC
ATTTCCCATAAAAAAGAGCAGCCTCACCTAAACCAATCCTACTTCGGTGGTCGACTTCCA
CTTCCTTTATATGCCGCATCGATGACACTTCCTCCATCTGCCGTCTTCATTAGCGTTGGT
GGGATTCAAGACCCGTGAACTGAAGGCGCGGTCTCCGGCAAGGAAGAGTGAGACATGGGA
GACGGACCAACCCACAAGGGACACAAGGCCCTGTCGCCTCCCATGCCCTACTCGTCCTCG
GAGGTATTCGCGACCTGTTCGTCGTCAGTGCCGACGTATATGAGGTTGATGATGTACGTG
GTGGTCCGTCAGTGTCCACCTACCACATGCGCCCCGAAAGTTGGACAAGGGCACGTAGGA
CGCACAACTGGTGGCGTTGGAGTCCTTGACCGCGTGGGTCACTAGCGCTTGTGTGGCGGC
GTCCACATCCTACTGCGTCGGGTTTGCATTGCGAACGGCGCCTTGAGCATGTGCGGCCTC
GTAGAGCATCCTCTCCTCTACAATGAAGTTCCAGTTCACCGCAGCCACAACCTCCTCGCT
TGCGCACTCTCGTAGATTTGGCCCTCCGCCAGCCGGTGCTGTTCGTGGAGGAATAAGTTG
TACATCTGCTCCTCCTGCGGAACACCGACATAGGAGCCGACACAGACCGCTCCTCCTCCG
TCATTGCAGCGTCGTTGTGCGCCTACACATGCTCCATGGTCACACCGACATGCACAAGCG
GGGTCTGACGTTGTGTCGTTATCGGAGCCCGTCTCCATCGCAGGGTTATCGTTGGAGACC
TCGGGCGAGCTAGCTGGCATGCCATAATCGATCCGCTAGGCACGAGGGTCTACACGCTGG
AGTTTGGCACCGTGGTGAATGTGGAGCAAGGGAGGAGGATATAGAGCGGAAGTGTTACAG
TGTGGAGTTTAGCCGGATGTGGACACCTTCAAACATTGGATCCCGGTGAGGCCAAGCGTC
AGGGTGTGTAAGTGCGTGGCACCGGAGTTGGTTTCTTGGCCGACAAGCCTACTTAATGGT
GGTATATGGACGAACGAGCATTGAACAAGCATGGTAGATACCCATCCAGGCCCGCACACT
AAACATCTCTCCCACATTGAATAAGCATGTACACTAGAGACATGACGAGGAAAACGCTCT
CGTCCGACGCGCCTCTTCAACGCCAACCCCAGTGAAAGGTTGCGTACGCTCTGAGCCAGC
GTCACTATGAAGCGACCGCTCTACAATGACATGAATGCGGGCGGCTAGCACCGAGCCAGA
ACTGATACGTCACCAACATATCGATAACTTTTTATCGTTCCATGATATTATATTATGAAA
TATAGGATACTTTATATGGAATTATACGCTATGTTATATCATTTTTGGAAACTAACATGG
TAACCCAGTTGGAAGGACATGGATATCGCCTAGAGGGGGGGGGGTTAATAGGCGCTTTAA
AATAATTACAGTTTAGGCTTGCACAAATGCAGAATAAAACTAACATTTAATTTGGCA