Contig Data
morexGenes
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Map Locations of contig_2549645 (4011 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2549645

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38071 2 1625 bp AK365357 Not available Available None
MLOC_38070 3 553 bp AK368556 Not available Available None





CDS Structure of MLOC_38071






CDS Structure of MLOC_38070






Contig Sequence (4011 bp)

>contig_2549645 4011 assembly3_WGSMorex_rbca.fasta
GGGCACGACGCGGCGCCACCCGAAGTGCGCGGCGAGCGCGGCGACAGCGCCGGCCTGCGC
CGCGTCGCTCACCGCGGCGCGGACGAAGAAGCTCGGCGAGGCGGGCGACACCGACGGGCT
GGTGGCCGAGAAGGACACGACGGGGACCTCGGCCCGCGTGGCGAGGTCGGCGACGAAGGC
CGCCTCGACGGACGACTGCGGGCCGAGGATGGCGCGCGCTCCCTGGGTCGTCATCAGCTG
CAACGCTGCATGCACCGATGGACGTGACGTCAAGCCAAACGAGCGGCAGAAAGGAACAGA
AGCGTCTGTCTGTTGGCCATACGTACCGGCGGACGCGGCGGCGACGACGTCCCCGCCGGA
GTCGTGCTGCAGGATCCGAACCCGGAAGGAGGAGTTGGGGAAGGCGGCGTAGAAGTCGTC
GAGGGCCATGGGGATGGTGGTGTTGGCGACCTTGCCGACGGGCGAGGCGGCGTCGATGAT
GAGCCCCACCCTGACCTCCGCCGGCGTGGTCGGCTGCGCCCGCGAGGTCACGGTGAAGGA
GGCGGCGAGGCCGGCCAGGATGAATAGAAGGTAGGGACGAGCGAACGAGTCCCCGGCCAT
GGCAGGAGAGAGCAGGGCAGTCAATTGCTTGGGCGAGACAACTACTAGTACCACCAGAGT
TCGGTCGCATCATCCTTCCTCTCTGTTTTTAACGAATTTGATTGGTTGCGCGCGTGGGTT
TGACCTCCTTTTGTAGAATCAGAGCCAATGTGCGGGTTTTGCATTTGTTCCAGTAGTTTC
TTTTCTGAAGATATATGCTGTATGTGTGTGTGAATCAGAGACAAATGTGACGTTGAATTT
GGATCCTATCCCAGGCATCTCATCAGTATGCTAGACAGAAGTTCAAGACCAAACAAGTAA
AACCAGACAACTCGTTGCAGATTTTTGTATAGTTTGCATTTGGTAAAAGCAAAACAAGTA
AAAAACCAGTGCTGAGTAAAACCAGTGGTGAGAAACAGCATCAGGTGGCACCTTAAAAGA
CGGCGTCATTTGGTAATTGCTTCGAATTTTGAGGGGGTGAGGAAATCAGCATACAGGCTA
GCAATTTACAGGTTTTTCATGAACCACAAGCATCCATGGCAAAAAAAAAAAAACATCAGA
ATCGCTTGCTCCTCACATCTATCACCAACCGCCAATGTGGCAATGCACATCAAGCATTGC
GTTCCACAAGAGATAAACTCTAAACATGTACATACAGACAGCTAAATGAACTACTAGTAC
TAAATTACAGGCTTACAGCGATCAGTAATTTACGCGCTCATCAAGCAGTAGTTCATTCCA
TGCTTATCTGTCTCCTGCGGATTGAGCTCCCACTGCGAGACAAGGAAGCTACTCTGTTTT
GCCCCCTCTCAGAATGCATGTAAGCAAACGACAGCGGTTCCGTGTCCTGAACCGAGATCT
CCCTGCCTGGTGTTCCTTCTCCTTCCTGTGGGCTTCCTGTCTCCGTGTTTGACAGGTGCT
CGACAATGTGACCAGGTATGCGTATGCTCAGTGGGGTCTCAACTGCACTACCAACATTTT
CCGTTGCGGCTTCATCTTCAACTGGAGTGTTGGAAGGACTATCGTCCCCGTGGAAGAGCT
TGGAGAGAACGACAGGCCATCTGCGCCATGAACTCTGACTGCTGTCACTGCTGAATTCAT
GTCGGTTGTTATAAATGGTTATGACAGCGTGCAGGACTAATGCCAGCACTGAAGATACTC
CGCTGATGATGAACAGCCCCTGAAAGCTGTGCAATGTAAGGCTGCTTGAAGTTTGGGAGT
CATCTTTGTCGGGGCATGAAGTATAGCCATACAATTCATTCTGCATCTTAACCATTCTGT
CATCCGATGCGAATTTCAGTATTCCCCTAGAAATATCAGGTGTGAGTGGAGAGCCTCGAG
GGAATGCCTGCAGAGTTAGCACACGATGGAGATCAGAAAGGGCTTCAGTGGTGATACACA
AGTCTGGCTTAGCGCTGAGCCAGTTATATTATCATTATTTCATGCCAGCCCAAAATAACG
TTGAGCCAGTTATATTAATCACTCATGCAAGCCCTTGGTAAGGTTCGAGGCAATCATATT
GATCATGATATTCCATCGTTCTTGAATGAACTTCAGAAAGTCTAACATAAAGACAAGGTA
GTAAACTAGATGAAAACCTGATCAAGTAGATAGATTCATCACGTTACGGAATACTTCAAT
AAGCAAGCAAGTCTTGTATTCCCTCTCTACCTAAATACTTGTAGACTAGTTCTCCCCAAC
TACAAGTATTTCGGTACAGAGGAAGTAGTTCCCAACAGAAAACCAATAAAATCGGCACCA
CTTTCCGCAGAACATGATCGTGCATTTTAGGTTTTTGACAAAACAAATCTAATCTTGCAG
TTGTCCTTTAGCATGTTGGCATATGACAAATTTAGGAATTTCGAAGTACAACTCAGACAT
GAGCTAAAACTATAATCTTAATCAGAAGTTTAAACTGATGGTACATTAATATATAAATTT
GAGCTACTAGCAGGATCCTGCAACAAATAAGCAGCGAAAATTGATTCGGCATCTAGAATT
TAACCATGTCAAAAACGAGCTACTGTTCAACGACTGGAAAAATGTTACTCACATAACCAA
ATCCATCAAACTTGTAGGTTGGTCCAACCATAGTGTAGTTCTGGCAATACTTTGAAAGGA
ACACCTTAAGGTATGGTATCTCATCAACAATGACGGCAACTTTTCCAGTTGATAACGCTT
CATTGTATTCCACTGGGGAGTCAAAGGCAATCATCTTTGATTCATCAATTTTCAACCTTT
TCAAAAGCCCAGGCAAGAAAGAATCATTGAGGTAGCCAACATTGCCCCCATTTCTGATAA
CTTCTTCTAAATTTGTGACTGTTGGCTGAAGTTGCTCCACTGTAAGGATCGAGCTTAAGC
TTGCAGTATAGCTCTGCTGCACTATTAGCGCGACAAAAAGCCAAACAACTATTGCAATTC
TTGATAAGTTGTGCAGGATCTGCTCCCTGTGAGCAAATACTAGTGTTGAGAAGGAGAAGT
AGAAGACTGATCCAATTTGACTGGCTGGGGAACCTCGGAAGTCTTGATTTATTCTATGCT
CAATACTCCAGACTACAAAACCTGTGAAGACAAAGAAGGCCCCAGTTCCTAACCATAGGT
CAGCTGTGAAAGGCCTTAGGAATGTCCATGCAGTCTTCTGTCTCCGGTCCTGAACTGGAA
CCAGCATGCGTACCCCTGATTCTGTGTAGGGAAGAGTAAAGTCCACATAGGAAGAACGGT
TGGCCAAGATTGTTATATCACCTACAACTGCATCATATCTCTGCCAGCAACAAATATAAA
AGTAAGTCGGGAAACTTTGTAGTACAGGCTATAAGGCTTTACAAGAGTATAAAATAAAAT
TCTACAGACAGGCTAAACTATCAATCACCTGAGAATGCAAGTCATACAGAAGTATACTAC
AGATTCAGAGGGGGGTAATGATTCTTTTAGAACACAATACAAGGGGGAATTGTAGATTTT
GCTGTGGAGCTGGTAACTTAGTACTTGAGAGTTAAGCTTATCAAGGTACACTGTTTGTCT
TGATATCCTACAGGTTAATTTGTCTCGATCTTCCTGGTTGACTAGAGAGACGGGTTCGTT
GAATAGGAACACGGCTCGATAGCAACCACAATGCTGCTTCTTTACCTTTGGGAGTGGTTA
ATAAAAGTTATGTTATTGACCGACCCTCTTGTAGTTACTTCGAATCAATAGGCCTATCAA
TTTTCATTAGGTGGGCCAAACAGTGATGAATAAAATGAAAAAATAGGGGAAGAGGAGATG
GTTGTGCCTTTAATTTTGTTTAACTGTGAACGGGTGCAGAGATATGGTTGTTAGGAAAGC
AACTTATCTTTATTAAAGGCCCAAGGGGCATATATATATTACACATGACTTGAGGCGCAA
GGAAAATAAACATAGACTAATAAGGACTCCTAGACTAATACTAATAGACTA