Contig Data
morexGenes
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Map Locations of contig_2549637 (5823 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2549637

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38063 2 987 bp MLOC_38063.2 Available Available None
MLOC_38065 1 735 bp MLOC_38065.1 Available Available None
MLOC_38064 1 318 bp MLOC_38064.1 Available Available None
MLOC_38062 3 1002 bp AK356819 Not available Available None





CDS Structure of MLOC_38063






CDS Structure of MLOC_38065






CDS Structure of MLOC_38064






CDS Structure of MLOC_38062






Contig Sequence (5823 bp)

>contig_2549637 5823 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCCCCCCCCCCCCCAACCCACATATCCCATCATCTCTCCGGCATAA
CGTGGTGGCGAAGATGGAAAGGCCAGTGGCGGCGGGCTAGCAGCAAAGGAATACAGTGCC
AATCCCAGCGAGAAGGCAGTTAGCGGCATAGGGTAAGCAGCGAAGGAAAATCAGCGGCGT
TCGCTCGCAGGGAAGAGAAGCAGGGCAGCGTGGAGGCGGATCGATTTGTCGCCGGCGCTG
CGATTCCTGGGCAGCGCTCCTCGGCAGCAGCTGCTTGCGGCAGATCAATTTCCTGGCTGC
TTGCAGAGTCAGCGGCCAGGCAGGAGCGGAGCAGCAACGGAGCCTGGGAAAGAAGCAGGT
AGCAGCCAGTGGAGCAGCAGCAGCAGCGGAGAGTGGGAGCGGCTAGCAGAGAGAGGAGCG
ACAACAGCATCGGCTAGCAGGGAAGGCAAGCAGCGACTTCATCACTTGATTTGCTCTGGT
GCTACTAGCTACAACATCAGCTAGCAAGTTTCCGCCTTGTTTTCTTTCATTTTCCCCTCA
CTTTATCACATCCCATAGTACTGGAGTGAAAACAAGCCTGAAGCTATGTATTGAGCTATA
ACATAGTTCATTTTTTGTTTTCACTCCATGTGAATGTATCTAACTGCCATACCTTATTAA
TTATTCTAATTAAATATAATTGAGCTATAACATAGTACATTTTTTTGACTTGCCAATTAT
TTCCATGTTTTTTCTGCTCAATCCTTATTGTTCCCACTTGTTTGCTTCATCATTTGTGTT
TGCGTGTCAGAGTTTGTTTTCAATGTTTTCAGTTGTCATCTACTCCCTCTGTCCCAAAAT
AAGTGACGCAAATTTAGTACCAAGTTAGTATAAATTTTATACTAAAGCAGTGACACTTAT
TTTGCGACAGAGGGAGTACATTTGAAGATAGCACAGGATAATAAACTTAGACAGAACCTC
TCACTATCATCTTTCTGTCCAATCAAAAGCTGCTTGTTGTTCACTGTTATTATGCATACT
ATTCGTATGGTGCAAATGGCACATTTAACCTTACTGTGTCCATGGTACTGTGGTAATCAA
TGGTTTCCTCCAAGTCATCTATTTCCTATATATAGGAGCTAACAACCTTGTCCTCCTATT
ACAGGACCTGGTGATAGAGGTCCAGAGAACCCTGTGCAGTACAGCCATGGAATTCACAGG
CAATCTCGATGAAGATAATGAGCTGGAAAGTCTAATTGACTCGCAGCTTGTTGCCCTTCG
AAAGGTGTTCAGAATACCCCACAAACCGCTTGATGATTCACATGGCCCAGCATCCAAGAA
GTTATTGACTCTTTTCAGATCAGGGAAACTCGGCCCGTTCATCCTCGATGACCTTCCTGA
CCAGCACTAAGGGGAAAGAAGATTCACTTGCCTTTGAATGCCCAGGTGATTGCAACCTTC
CAGGAATAGTTTTGCTATGAGGTAATGCGATGTGTCACAGTGTTCAGTACTACTCATAGA
TAACTCGAAGCAGACATGTGCCTTTCTGCGCAGATTCCCTTGTAGGGCTTCTCCATTTGC
TGCTTATCTGGTGGTGGGTTCTTTGCCTATGTTGATTGGCTGCCGTTTCTTGTTTTTCCG
TGGTCTTTTTGTCCCCTTCCTCTTGAGATTTTGGCAGAAGTGGTTGTGCAAGGTCTTTAG
CAGACTTGTGTGGGGCAACCGATTTTGCATCATCAGCAGGTGGGTTCCTTGGACCGTCGG
TGGGGCACTAATACATAAAAACCGTAGGCAGCCAGTATTGAACTTTTGATTGATTAAAGT
AGCAATGGTAAGTTGAGCAAGGTTTTGGATCTCCTGAAGCTAAAATGGTTTTGCATCTCT
TGAATATGAGGCTCGGTAGTAGGTTAGGGCGGTGACATTAAGTACCCTAATTTTATGTAG
GTTACCTCTGCCTAGGGGGCTATTCAAATCTTTAGGTGAAGGGTGCAATTTTGAGATGAT
ATACGAATTAATATATGTTGACATCTTATTTACTGGTGTAGAAATCGATCATGTGTGTTG
TGTCGTGTCGCATCCTTATTATCATGTAAGTATGCGTTGCAAACTTCTTTCAATTTCGAT
GCATTTTAGTAGTCGGCATCATCATCGAGCGGGACCATGAGGTCGGCACGCTGGGTGATT
TCACAGCCGATGGTGAGGGGCGGCCAATGCCGGCGGATCATCATGGAGATCACCTTACGT
GTCCCCTCGTCAACGCCAGCAAAGTTGTGCCCGGTTGGGACGTTGGGTGTACTCGATCGG
TTTCCCCTCGTCGACGCCAGCAAAGTTGTGCCCGGTTGGGACGTTGAGTGTACTCGATCG
ATTTCCCCTCGTCAACGCCAGCAAAGTTGTGCCCAGTTGGGACGTTGGCTGTACTCGATC
GGTTTCCACCGAGCTTTGCTTATGTGCAGCCGTGCAGAGGGAACTGCAACTGTTTGTGTG
CAGGCTGAATAGGCACATTACATATGTGTTCGTTGCACCCAATATATCAGATTTTATAAG
AAAAAAGAAAATAGTGAAATGTCCAATGAATTCACAAACGTGTCTTTCATATTCCAGTAA
GGGAGATCACAACCTCACAAATACTCTAATTTTGCCGTCTTGTACCTTAGAAAAGTTAAA
TGGGTTACACTGCTACATATGTAATTCATACTATCTTTTATGGTCCACCTTATTCTAACA
TACGTAACAAACCTATAACAGCATCGCACAAGCTCATTGCATACAACGTTATTCAGTGCA
ACGCTCTGCGAATTTCTCCCATGACGCTGGGCATCCAAGAAACTCTTCAACTTTTGCCTC
TGTAATGGAAGACAGCAACATGTGCTCAAACTTGAGCAAGCATCTTCCTCCAACGTCTGG
CTTCCCCACCTTTCAATTTTCAGATCCTGGAGGTTGGTTGAATCTAATTCGAACGGAATA
AAAAACCATTACACAGAAGAACAATAATTGTACAAAACCGTTGTCTGATTGTCGAGTGAA
GGTCCATGTAGAAATGGCTCGTAGTAGTATAGTAAATGCTCACCATGATCTTTTGCTTTC
TTCCAATATTTCAGAGTATTCCATAGACTGAAAGTAATATGAAAGAAAACACATCTAGAC
TCATGAACACTGGACCTTTAACATCCTAAATCCTAAGGCAGGTGAGCAGATGTGTGACTA
CATATATATAGCCTTGGACATCCAAGCATGCGATAAGTGTTGGCCAAGTCATCCAGGAAC
TTCTTAAAAGCTTTCATTATCTGGGTAGGCACTGAAAGATCATGTGATCGTTATCTGTTT
ACGATGTAGTTCTTCTTACAAAACAAAAATGAAGAGAAAAGAAGGTGAAAACTTCATGAA
ATGAGTAATTGGATCTGCATGAAGAAGGGTCAGAGCTTCATGAATACCCATTGTATGAAT
ACTCTCAGTCAGGCCCAATTCAAGACCTGTGATTAGAAAATGTGTAAGCAATCTGCCAAA
TAGTATGAAAAATTGGAGGAAACCAAAAGATCATTCAAACCACGAAGGCACCATTACTGC
ACGGGGCACTCATCACCCCACCACATGTGTGCATGCAGTGCACGGGGAAATTCATTATAA
TTGTAGAGATCCAGCTTAATTATCACAAGATAACAAGATTCCTTGAATCGATACCCACGC
TTGCAAATCTCCATGGCTCTGGTGAATCAAATAAATTTTACAATATAGCCGTACCAATTT
TTTTTAAGCATACACCTGAAGGCGGCATACGTTCCTTGCATTCATCTGAACAGGAAAACA
GTACATACATGCATACAAATACTATTACGATGGAAGAATCATGGTCATCGAACTCTTAGT
TGTTCGAGTTTCAAAAGCCTAGAATGAACAATAATTGTACACATCATTTTTGTATTTTTC
ATGTTAAGTTCCTCGGAGAAATGAAACCTTTTTAAGTTTGGGTTCCCAAAGTGTCCACAT
ATTACTATCATGGATTCTTGCAAACAATTTTCGAGTTAAGGGCTCGTGAATCATGACTAG
TTGGCTAAAATTTCGCAACATTTAATTTCTTCTTTTTTATTTTTTGAGAAACTGTTGTCA
ACATTTGGTATGGGCTGCGGGGACATCAAATATGCATGCCCTTACAACATCCTTCAAGAG
ATATAGCAAAAGAAACCGAACGGTTCACACACAACACACCCGATGGGCGTGGCTGCAACG
AATGGCTGTTGTTGCTGGTCTTTGTTAATTGCACTGCATGTTGTGTTAATACTTAATAGG
CTAACACGTCTCACAAGATTGAAACATATGAGATGCAACAGCGGTTTTAATACAGAGATG
AGATGTAAGAGCGTATTTTACTATTTTTACTGCTTTCCAAAAGCCTAGCAACACTCAGTT
GGCCCTCTCAGTCGAGCTCCTGAACCTGAATGCCACTAATGGTTGTAGCATGCTACTGCT
CTGTTTCTCAACGAAGAAGAGATGCAGGTAGCATAACCGGGTGGTCGAATGTTAGCCCAG
CTGCACCCATGAACCGAATGTTCCACTGCATGAACCGAATTATTATTTTTTCCTTCAAAA
AAATTGGTTTGAAACACAGGGGTGGAACCCCGGTTGCATCTCAGTCAGAAACGAAGCCAG
AATAGAAACATCCCAGTTTCATACATAATGCAACTAAAAAGGCAGAAATGAGTTATGAAA
GAACAACAGGCACATGCCCGACCCACCCAAACAACATACCTACACTTCGATATTCAATGG
AGGAGAGCGATCCCACTTCAAAACTTACGAAACACGGGACATGAATATCATCATCCTCGG
ATCATTCGGGGATCCGACTGATGCCCCCAAGGTAATTTGACCGCTTGAACCCTAAGCTCG
ACTAGTTTAACGACCCACTTCAGATTTGCAAATCGGCGAGTATTCTTCCAACCTTGGTGA
CTGGCATCTGGCCATGGTAGGTGAGGGCAGCAAACATCTGAAGGAGGATGCACATGTTTT
TGCGGATGTTGTCATCTCCCCGCCTCCCGCCAAGAAGGCCCGACCCACAGTGGTGTCCTC
TAGATACTCCTCTATTTGTGTCACCTCTATGGTAAAAACAATTTCCGGAAAGTGCTCATG
GTTCGGAGCAGCGGCGGGGTTCTTCCACGACCCTGTAGCATGTATAATGTAGATTGTGTG
GTGCTTTAGCGGGAGTATGGATGGGGTGCGGCGGGGCTGTGAGATGCCGCCGCTGAATAC
ACGGGACAACACCGCGACTGCGATGTGGTTGATGGCCAGCTCCATTTCTGACAGAAATGA
AACTGCAACCGGGTTGGAGTTGACAAATCTGTGGTTTTTGGTAATGCATGAGTGTATAAG
GACATATCGATATATCTTGTTTTCCTCCAATATTTTATTCGAGAGTATCCCATAGACTGG
GTACTACAATATAACATATCAACCATACAACATTGGACCTGTGACATAATAATTCCTAAG
GCAGGTGGATATATATAGGGCTAGCTAGACGCAGTTTTGTTAGCTAAGCATGCAATAAGC
GTGCTAATCAAGTCATTCAAGAGGTGTTTTCTCATCTCTCTTTGATCGTGTGATCGTTCT
ATTTCCATGTTTTGTTTCCTCTTGCAAAAACAGAAGAACAGAGAATACTTCATGACATGA
GAAGTTCAATGTCAATCGCACGAGGAACAAGCATAAGCACTAGTAGAAAAAGGTCTTTCG
TCCCAACTCAATTTACACATTAATCATGGTTCCATTATGAAACGGGACTAATGTTACCAT
TAGTCCCGGTTCGAGCAGCAAGGGCGCCGGTCGGGCAGTAGTCCCGGTTCGTGTCTCGAA
CCG