Contig Data
morexGenes
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Map Locations of contig_2549616 (2579 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2549616

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38053 2 1095 bp MLOC_38053.1 Available Available LOC_Os12g04030.1, FRAME:+2, EVALUE:0.0, 13112.m00377 protein HEAT repeat family protein, putative, expressed





CDS Structure of MLOC_38053






Contig Sequence (2579 bp)

>contig_2549616 2579 assembly3_WGSMorex_rbca.fasta
CGGCGGGGTAGTCCGGGCGGCGCGGCTTTAAAAAGTTAGAAAATGCAAATATTGTGGCCC
TAGGACTCACTTGTCAGCTCATATGCTATGGTACAGTTTTCTAGTTATGCATCTTGGCGA
TGGTGCTGAGCATGCCTTTTCTCAGTTAGATGTTTGCACTGGGCTTATGGCTATCATGAA
CATTTGGCGTTCACTTACTTTACAGGAAGCCTTTTCTCACCTTATTGGCGATTCTAATGA
GCTTACACAAGATTTGGCATCCCAAGGTATGAGTATTGTGTATGAACTTGGTGATGCTTC
TATGAAAGGGCAGTTGGTTCATGCACTGGTGAATACACTGACTGGCGCAGCAAAAAAGAA
AAAGGCCATTAAGGTGCATAATATTTTCTCAAATTTCTACCTTTTTATGAGATCCTCAAT
TATCTTTTACTTAAGTATTTTTTTTCTTGATGTACTTGCATTAGCTGATGGAGGATTCAG
AAGTTTTTCAAGAAGGAACCATTGGCAGTAATCCTACTGGAGGAAAGCTTAGCACATACA
AGGAGCTCTGTAGTCTTGCCAATGAGATGGGACAACCTGACTTGATATACAAGTTCATGG
ATCTGGCTAACTATCAGGCTGCTCTCAATTCCAAGAGGGGTGCTGCTTTTGGATTTTCCA
AGATAGCCAAACAAGCTGGGGAGGCACTTCAACCCCATCTGCACACCTTAATTCCTAGGC
TTGTCCGATACCAATATGATCCTGATAAGAATATCCAGGTATGAAGTATTTACACTCACA
TTATGATATTTTCCATATTCCTCTTTTTGGGTGGTGCGGTGAAATTAAATTGATAGTATT
AGTATGTGAATATTTGCACCTCAATGTGGACGAGTCACCTCAGCTATTGGGGAATGTTGC
TTCTGTGAAAGATCAGATGCCTACATATTTGGCCAGAATGACTTGCCTAGGATTCTTTAT
CTCATGTATTACTATTTACCAACAAGTTGGTTAGGGAGCTTGCGGAGACTCAGTTTCAGT
GATTAGCAAGTATTACCTGGTACAGTGGGTGTCATTTGGTGAAATTTTAGCATTTATCAC
GGGAAAAAAATTAACTCGTCCAGAAACAATATGTCTGCCCTTTTTGCATGTCACAGTTCC
TCAAACAAATCAGAATGTTGACCACTTCTCCAAGTTTGGCTGTGCTTTTGTGTTGCAAAT
AGAGTCATTATTGTTTCATAAAAATTGAGCTTGTTTGTTTCCCTCATCCTGCACTAGACA
CCACCATTTTCCTGATGCAGCAGCACACTTAGCTATAAAATGTCTTGCCTGTTGAATAAT
CCTGTGAGACTGCTGTTGCTTGGCCATACCATTGACTACCATGGTCCCATATGGTTGGCT
AACCAGCCGTGACACAATCAACTATTGGTGTCGCTGCTGCTGCAGTGCACAACTGCACAC
CATCCTTACTGTGCCTGCAATTAATAAAGCTTGGATTTATAAGGAACGGATAGTTATAAT
GCTATAAGCATCTTTAGCTCTGCTTTTTATGTATACTAGGTACAGCGCCAATCATTAGTA
TTTTTGGCATCGTATATTAGCACTCTTTGTTGATCTTCTTACTGATGTGTGCACTCATAG
ATTAGCTAATTATGACCTAGAATATTATCTTAAGCAGCAATAAGCTTTCCTCCCAGTTGA
CAATTCCAATTTCATTTCTAGGATTCAATGGGGCATATCTGGAAGTTAATTGTTTCAGAT
CCCAAAAAGGCAATAGATGAACATTATGATGTCATAGTAGAGGATTTGTTGGTTCAATCT
GGATCACGGCTTTGGCGCTCACGCGAAGCTTCTTGTCTTGCACTCGCAGACATCATCCAA
GGTCGAAGATATAGTCAGGTATGTGATTATTTTGAAGTTAATTTCAAACTTTCAGTCAGT
GCACTAGGCTGCACAATCTTTTGAGAATGAAATAGAACTCAGCATTTCTTTTGTTCTTCT
CAAGGTTTCTAAGCATTTAAGAAAAATATGGACAACCACCTTCCGTGCAATGGATGACAT
AAAGGAAACCGTGCGAAATGCTGGTGACAGTTTGTGCCGAGCTGTAAGCTCATTGACAGT
TAGGCTCTGTGATGTGTCACTTACTACCTCTTCTGATGCAAAAGAAACAATGAATATTGT
ACTTCCATTCTTGCTTTCTGAAGGCATACTCAGTAAAGTTGCAAGCGTTCAAAAATCATC
TATAAATCTGGTCATGAAGCTTGCTAAGGTATTGTCAGCGGTGAAAGTTATAATGTTTAA
CTGTACTTATACCATAATGAGTAAGATGCAGCATCCAATGCTATTAAAATTCAGTGGTAG
TTTCTGAAAGCTCTATTTTATCTTGACATATTAAGCGAGCACGAGATCACAGGTTACAAT
ATTCATGGAATTGTTTCTCGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGAAAAAA
TTCCGGGGGGGGGGTGCTTTTGGTGGGGGAGTTGGGGGGCACGACAGTTGGGTGGGGGCC
GCCCCGGGGGCCGGGCGGTGGGAAAACACGCAAGGGGGGGCAGCGGGACCGGGGAGCGG