Map Locations of contig_2549588 (3639 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2549588

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38038 2 926 bp AK356634 Available Available None





CDS Structure of MLOC_38038






Contig Sequence (3639 bp)

>contig_2549588 3639 assembly3_WGSMorex_rbca.fasta
AAAACGTCTTATATTGTGGGACGGAGAGATACCATTTATGTAGAACATTAATAGTCATGT
CTGCCATGCACTAACTACAGTTATGCTACAGGATGTTAAATGGCAGGTTGGTTCAGAATA
CACTCCAGCGGATGCTCTGGCCCAGGGTTTAAAATCATTGGCTCTGAATGAGACTAGGGT
CCTCTCAAGAACTATCGCTGACTACTTCAGATCCCTTTAGAAGCTTAGATTATAATAATT
CTATGTCCATTGAAACTTCAGAATGCTGCTTATGAAGGTATGTGATTTTGCTGAATCTTT
ATGTAACTTCTGTGGTGTAAAAACCTAGGACCATGGCCTGCATTACAGCCATTACTCATA
CAGTTAGCACATTGGAGATGCTTTAGCACATATCAGGGCCAAAACTGCAGAAATGTCTGT
AGAATCTGCAGTACTATACGGCCTCCTTTCAGTTAACTTTGGGTCATGCATCACAAACAT
TTTGCTGGTCGCCTCTTTCCTGATGCAGTTGGCTGGGGTGTGGGGGTTGCCACTACAAGG
ACACACCGGAGTAAATATTATAGCGCCTACGACTCGAAGAGCGATGTATTTGGACTGTTT
GGCACCGGCTGGCCGTACTAGTTCTATTATCTGATCAAGATGGGGAGGTTGGGACCAAGT
TGTTGGACTCTAGTCAGGCTATACACTGCATTTAACCCGAAATCCAAGAGGAACAAGGAT
CCATTCTCAGGTATGGCACCAGCGACGCTGAGTTGGCCGTATACACCTTCCAGCAGGCAG
GCAAGTCTGTCCATGCACGGCCTTCTTCTGGTCGGCATTTTACGTGTGTAATACGACAAT
GCATACATCATGTGTAGATTTGCCATGTTTATATGCTCTGTATAAGATGAAGTAACATTT
GGGACAGCATTGTGCACATGTTTGAGAATGTTGTGAGTTATTGGTCATGGATTTCACGGG
TTGGGTAAAAGCTCGGTAAGAAGTACCGCGCCCAGTTCTCTAGAGTAAATTAGCCAGTAG
TTCAGATAATAGCCATTGTATCTTTTCCTGTGGCTTGAATGAATGGTGGGTGAAAAGAGC
AGCCGCCGCATGGATCGACGCCAGTCCATGCCCACTCGTCCGGCCTGAAAGAAAAGAAAA
ATATCCATGGGGGTACGAACGCACTGCGTGAGCCCAGTTGAGCGTTGCCTGCGCATCGCA
ACTTGTCCGGCGATCGTCGGCGTAGATTACGTATCGCGTGACAGCACAGCTCAGGTCTAG
CAAGCCACTGCCAGAGCCAGTCCAAGGCCTGGACCCTGGACGCGTCCGTGCTTGCAGCCG
CGTCCGTTGGTCCGTTGGCTCGTATCCATGCTCGATCTGGCACTGACGAGATAGATAGAG
AGAGAGAGAGAGAGACGAGGCGCCCATGCAGCATGCCCACCTGTAGCTAGCTAGCTACCC
GGGCCGGCACGCAGAAACTGTCACGCCCGCCCGCAGAGCCGACGGCGGTTTGCGCTCTCG
GGATCCGCGCCGCCACGCAAGTGGTAGCGAGCGATCGTCGGACCTGCATGTGGCCGCGTT
GCCCGGCCGGTAGTTTCCTGTTAATTCCTACGGCCTCGTTCGCCTTGGCGGCTGCACAAC
TAACTAACCTTCCTACTCGATCGGTGTTTATTTTGTGCCATGCTCGACATTCAGTTGCGT
CCTCAACTTCGACATGACACATGATCGATCGCTCGTTTGGATTCGATCACGTAAACGCTT
TACTTGTCTGCGTGTGTTTCGCATGTTTTGTGTGTGTGCGCGGGAGAGTCCACCTCCACC
GTCTACGTGTTTCAAACGTGCCACCAAGTACTCCTACTTCGGCGCAAGATTAATGCTCGA
TCGACACGGCGCGATGGCCAGCCCAAACTCCGTGCTTCTTATCTTATGGCCCAGCAAACT
GACGATGCAAAATGCAAGACGCCGGCTACACTGCCTGTATATGCGTTCATATGCATGCGC
GCACGTGGTAGATCAGAAAACGGAGACGACGGCACGATCCCGCGCCGATTGTTGATTATT
TCATCTACACAGTGCGCCACAGCAACCTAACGTGCATCGACGACGACGGCGACGACGACC
GTGTACTGGACTAGCAGTACGCGACATGGTTTGAGGTTAATACACATAGTACATACACTG
ATACGCGACAGCAGCTTGGCATACACACACCATGTTCCTCTGTCGCAACAGATCTGTTAC
ACGGAAGCGACTGAATAAGCATGCATGGTCTTTTGTCTACGTCTCACCACTGCACCGCTG
GTAAATCGGGCGGGCAAAGCACCAAGGGATCCAACGCGACCGAGGGCTCAGTCTCCGTCT
CACCACTGCACCACCATGTACCGACACAGTGACACCAGTACATATATGCACGATCACTCT
GTAGAGGACTTTGTTGTCTTCTAGGCACCTGGTTGTACCTGCGCTATCATGGCCACAACA
CCCGCGCCGTTTTGGACGAGCTTTGATCGGCCCGGCGACAAAGTATACCATGTAGGATAA
GGATATATACGCCGGAAACAAGGATCCAAACACGCCGCGGCTAGCTAAGCTAGGAGCATC
TTCGTACACGCATTTGGTTCCTTCAACAGTGAGCTAATGACCGAATAATTTCGTAGGTGT
TGCACGTAGGCTACTGTTGCGCATTTGTTATGCTTATCGCCAGGCTCAGGAGACGGATCC
ACGTTCGTATACGTCCATACGTGCATGCATCGTGCATGGGACGGATCGGCGCGTTTGGCT
CGTCGCGGTTCCCGGTGATGCACTGCGTAGGAAGCAGACCCTGCATGCCGCTGGCCACTG
TGAATTGCTGCTCTTTGCTTGGTCTCGCTTCGGCCAGGCAGGCGCGCCAGTGTGCCGCGA
TAGTATATGCTATCGCCCCCCAGATGCTCCCAACTGCTTGTCGATCGATCGGTCATCGAC
CCCTATGTGCCACCTCTATGTAGCACGTGCGGGCTACACTGGCTAGCAGCAGCCAGTATA
TTTTTTTCTACTCCCTCCGTTTTATAATATAATTTTATTTTGACACTAGTATAATATCAA
AATCGTTTTTATACTATGATACAGAGAAAGTACATGATAGTCTCATCAGTTTCTTTTTAT
CCGATTCTAAAAAAAAAGTTTCTTCTTATCCGTGAAATAAATCATCTTTTATCTCTTTCA
ACCGATGGAGTCACGAGAGGCATGATTCAGGACCATGGTTCAGCCGACCCTATGCTCCAC
GTCGTACGATTCAACATCCTTCTACATGTGGATTCGTGCCATGCATACTAACTCCATCCA
ACACTTCTGTAATATGCATTGTTTAACTTGCAAACATCTTTCACCATGCATTTTTAACTA
ACTATGCGCATATCCTTATGAACAGTGTCCAGAGATCAATGTTATCGAGTGTAGGTTCAG
CTGAAAGCTGAACCATGGTCCAGAGAAACATTTTCGTGGAGTCACACTAGCATAGCATAG
CCTTTCATTTTATTTTACACCAAAAAGACAAAACTCCAACTCAGCTAATATAGACTGGCT
AGATGGGATATTATTTGTAGACCCAAGGATCAGGGAGGTTTGGGGATTGAAAATTTAGAG
GTTAAGAACAGGTGTCTGCTTAGCAAGTGGCTATTCAGA