Contig Data
morexGenes
Links



Map Locations of contig_2549567 (5611 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2549567

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38027 3 3698 bp MLOC_38027.1 Available Available LOC_Os09g33860.1, FRAME:-1, EVALUE:0.0, 13109.m03383 protein protein kinase, putative, expressed





CDS Structure of MLOC_38027






Contig Sequence (5611 bp)

>contig_2549567 5611 assembly3_WGSMorex_rbca.fasta
GTACGCTATCAGGGAGTCGCACCCCTGTCTATATAACATGCAACCGTGGCCCTGAACCGG
GTACAACGTTCCCACAAAGAAGAGTTTGACAGTGAACAAGTCAATGAGTAAGATGAGGAC
AAGGATGGTCAAAGTCCAACTCCAAGCTTGGAGATTCCCACAAAAAGAGGCCTCCAAGGA
GGAAGCAAGAGAAGAAAATAATGAAGACGATGTTGTGTTCCAAACCACGACGGACCAGTC
GATGACTACAACAAAGAGATGGAGAATAAATGGAAGCAAGAAGGTGTGTGCATGTGTTGT
GGTAGCGTGTGTTTGTACTGAGTTGTTGATGATCGTTGGTTTATACGTAAATCGGGACGA
AAGTCTTTTTCGGTAAAGGAAGCAAGATAAGGAATCAAGTGGATGGAGGTCATGCCCATG
GAAGAGAGTGCAAGATGGCGTATAACGTGCACAAGGTGGCAATTGAAGATGAGAAGTTGA
GATTCCCTGGAGAGGGGTGTTTGCGAAAAATATGGAGCGACAATACAAGATTATGTTCAT
GGACACCAGTGGGCTCAATGAAACACGGTGGAAATAAGAGCATGCTGCTCTATGTTTAAG
TCCTGTGATTCATGTTTGAATTTACCAAATTTCTCACAAAGAATTTTTTTGACTACCAAG
TGCCTGTTCAAAATTTCTTCAGGTCTCACAACTCCGGTCCACACGAGAAGATAGGTTTGA
GCAACTCCGTGCAATTGTGCTGTCGCTCCCTCCGCTCCGGGAGCTGCGGTTGTGGAGCGG
AGAGGATCCGAACAGGGCCTAAGACTAGTAATTATAAGTGAACATAGACAAGAAAAGCTT
ACTGAAGAGAACATTCCATGGGCACAGAATCTAAGCTCTACAAAAAGAACTCAACAAACA
TGCACTAGCACCTGTGGCATTTTTATCTATGTTCTATAAACACTAGAATACAAACTCAAA
GAATAAAGGCATTATTAACCACTGAGATCGAAGTATGAGAAACCCAATTACAAGGTGAAA
GGAAGCATCAAGTACTGCCCGAAGAACACATAACACAGAACAAAAAAAACGAAGTATATG
AGTGAAAAAGACACAAAATAACAAATTAACTGCAGTAGTCCTCGATGACCACAAGAAATA
CGGGCAAGCAGTACCTGCCAGGGTAACCTACAAGGTGATCCATAAGAATGCGTTATTTTA
TTTCTCTCAGATATACAATCTGATCAAGACAACACAAAAAACATGTGGCAAAGTTGAATC
AAAAGGACGTACCAAGGAAAATTGCTATCACTTTACATGAACCTCGCATTGCACATGTTG
TCATGTATCTGAAGGTGTGTCTGGAGCTCCCGGTTGCTGTTGTGGTTTATTTATAAGAAG
GGGAGACAATGCTTTGACTACAATGCTCATGCTAGGTCTAAACTCAGACTCGTATTGCAC
ACAGAGAGCTGCCACTGCCGCGAGCTGCACAGATAGCAAATAAAACAACAGTTGATATGT
TAGAATTTCACAAATCTAGCGGATTTTCCCTAACAATTCATAGCAACTTGAAGATTGTAT
CAAAGCTGAGAAATGCCCATTCATTCCTAAAGGAAAGAAAAACTAGAGCTAGCAATGCAG
TTTTTCCCTAGCAACACAAAGTAACTTGAAGAATATTTTAGCAAAGCTAAGAAATGTCCA
TTCACTTCCTAAATAAAAACCATCTTTGGATATATTAAGCATGTACATAGTGTTGTTCTC
ATCAGGTTGCAGCCACTTTGAGTGGCTTTATAATTGTTGGCTATCTATAACTTCCCTTTT
AAGCACAAAATGATACACATATGGATGTGTACTAAAAATGGTGCTTCAGAAGAGCATATC
GGCATTATGGAGGAGGGCGAAAGATATACCTTGGCAACTCCTTTTGGAGGGTACTCTCCA
TTTAATCTTGGATCAACACATTGTTTTACCTTGTCCTCACCAAGCCTTGGTGTTGCCTGG
TTAGAAGATGAACAACAAATCAGTCTATAAATTAAACCTAGAAAGTACTACATCCAGCTA
CCTTTTTTGGTAATAAATTAGACGAAACATTGCAAAAACTTTACTGACGTGCCAAACAAC
AAAGTTATCAGATATGTACAGAACTGCTTACACATAATCCAGAACAAATATGTTATATGG
AATTATAGAAGCATGCATTATTGCATCTAGTTCCAGAAAAAACAAAGGGGTTTGAAATTG
AGCATACGTATGTTACAGCTTATGTCCTGTGAAAATGGGGCTGTTAGTCTCAGCCCTATT
GAGTCTATTATAGCCTCTATAAATCAACCCCCATCAGGACAATACCACAGACAAAGAAAT
GGCAGCTCTTCCCCTTTGAGGGCAGAATCTTGTTGAATAATAGGGTGAACAAAAGATGTG
AATGGATACATACCCAGGTAACAAGACTCTGCTGTCCCCTTGGCATCGTGTGATCTACTG
GTTTCCTTCCAGTTAGGAGCTCTAAAAGAACAACCCCAAAGCTATACACATCACTTTTTT
GCGTCAGTTGGCCAGTCATGGCATACCTGCATGGCGTAAGATACCTCTTATATGCTGAAA
TCAGGTGATTATTATAGTTTGCCATATATATTCAGTACCTAAATATTAAGAGTTAAAGGA
AGTTCAGTTGCAAAACACAAAACTGAAGTTCATTAGAATGCTTTCTTACATTCATGATTT
GGTGAAACCCCAACAGATTATTACTCAGAACCACAATCGAAAATATATTATACAGGACTA
TGGAAAATATTTCAGATATATAAGTCGAATAATTACTCGGGAGCATGATATCCAAAGGTT
CCAAGCACACGAGTCGAATGTAGACGAGCAGCCATATCAGGGGATTGATTTGAAAGGTTG
AAATCTGCAATTTTAGCTTTGTAGTCCTCAAATAAAAGTACATTGCTCGACCGTATGTCT
CGATGGACTACAGAAGGCTGGACCTTCTCGTGAAGATACTCAAGCCCTTTTGCAGCATCA
ACAGCAATGTTGATCCTTTGCATCCAGTCAAGTGCAGGGCCAGGCTGTGCACCAGCAACA
CCCTTTCTCCCTGTTGAAAGAGCAAATTTTCAGAAAGAATACGCATGATGTTATATATGT
GTAGCTTTGACGGCAGCGTGCATGGAATGGACATACATAAAACCTTGAATTAGCTCTATG
ATAACTCTTATGTGTCTGCTAGATAAATACCATGCAAAATATCATGTAGAGAGCCCATAG
TAGCAAATTCGTAGGCCAGTAAGCGTTGATCTCCTTCCAGACAGTACCCAAGCAAGTCAA
CAAAATGTTCATGTTTTAATCTAGAAATAACGGAGACCTATATCCAAAGAAGTAAAAGGT
CCATAACAATTGGTCAATAAAATCTGTAGATAAATTGGAGTTACATTTGCATATAGCTAT
ATACCTGGCAACCATACCTGCGCGATAAATTCATTGTCAGGCTCAGGGTCTGCTGAAGTA
TCAAGCTTTTTCACAGCCACATGTGTCCCGTTCTCTAGAACAGCGTAATACACTCTTCCG
TATGAACCCTCACCAACCAAAGCTTTTGACCCAAAATCATCTGTTTTTTCTTTCAGTTCA
TCAAATGACAATTCAGGTACTTGAATGGAGGGAGGTGCTTTTCCCTGATCACCAATTTGA
GTAAAACCATTACCTGAAACCCATATGTTAAAATGGATATGGTGTCAGCAGCAGAAACAT
AGAATGCAGAGATACAGAGAGATATTATGCAGAATGCGTTGATATATGATATACCTGCGC
TTGAGAAAAAGATATATGATATGAACTACTTCTTTCTATAACTATCATGAACTACTGGAT
AAAACAGATATAGAACAAAAAAGAAGGTAACTGAACCTTGCAATAGTTGAATCAGCAAAA
ACCAACAACTAATAAATGCCGTTCAACTGTACCAGACAAGTTTCCTCGAAGACCTTGCAT
AAATAGACTGTCATTTGTTCAACAAAAAAGACAGTCTAATGTAATCACATAGCCCTGAAG
GAAGGAACTACAAACTTCGCATTGATAACTGAATAATTGTATCAGTTAGACTAGTCTAGA
TCATGTGACAGTACAGTTTGGCTGTTTCAGTCAACTATCTGCTAAATACAGCTAGCAATG
CATGTACCCAGCAAAGTTGTGTATCGCTATATTATACGAACTATATAAAAGTGGTTTTCC
ATCGTGATGGTCGGAGGGAAACAAAGTTGTACTGTAATTGGTCAATGACCTCAAAACCGA
TTGCAAGTGAGACAAGTATGCCCATTGCACTGGAAATGCTACTCCCATCTGGAGTAATAG
TACAAAGCTCTATCAACCAGCAAGGTGAATTACACGCAGTTCCTTGTTATCAATTCCTAA
TAGTACAAACTGTCATTTACACTAGTCCTGTTAAAAATGTCAACTGAACATGGACAAGGG
TAGAAACATGATGTGTCAGTCTGTCAGAAGGTCATTTATATGTTCAGACTGAAGAAGCAG
GGGCATGCTCACATCAAGTAAAGAACAGACGTACCATTTGCCCTTTCAGGACTGTGTGGA
AACTCATCCCCATTTTCCTCATACGGTGTGTCAACATGTGCGCAGCAAAACCACCGCCGC
ATAATGACCAATCGATCCACTTCTCCTTTTGCTCGCTTCTTGTCCCTGCCTCAACAAGCG
AAACCAAGATTTGACATTAGCACAAACGGTCATGCCAATACACGGCGGAGGCATACACAA
ATGGCGGAGCCAGAGAAGCCTCACCTCAGCTGCGCGCGACGGCGCGGCGGAGCAAGAACC
AGGCGGGGATAGTGGCGCGGATGATCCTGGCCTCTTGGGAGAGGAGGAGACCCTGAGCTG
AACTGAGCTGAGCAGAGCAATCTGCCTATCTGGGACGGCGGCGAGGAGGGAAAGGGAAGA
AGGGGAGGTGGTGGCGACGATGATGGAAAAGCGAGCTACTTACTGGCTTGGATTTCTTTA
AAGCCCAAAACGAGTTTTCCCTCTGTAATCCTCCTGTCGTCGGTCGCCGCCTGGTTTTAT
TCCAGCTCGGCTCCTCCTGCTTTCCAGCTCGCCGCCGTCCGGATTGATTTTGCCTAACGT
GTTCGGTGATGATCATTTAATTGATTTAATTGGTTCATCATTGCTGTCGATTGATTGTCT
ACGCTTTGGATTTGGTTGCGTGACGGTTGGCGGTGATTCTCCACTTGGCCAGGTACCGCT
AGTGTCCAGTCAGTTCCCAAACAAAATTTCGGTGCTCTTGTTGGGGGTAGGAATCAAATA
ATGGGATCGCGGTCCTTTGGTGGCACAAATCATCTAACTGAACTAGTCACCATCCACGTA
ATCATAAAAAATTAGATGATGCCTCGACACGATGTTGTGAAAAACTTCTAAAAGAATAAA
AGAATAGGGCGTCTACGCATTCACCGGTGGATGTTTACTAAACATCCATCACTTGGAGGG
TCATCCGATCTACGCGTAGCCGTCCGATCTGCTCCGACCAGGCACCCCATAATTTCTGAA
ACGATGGCTGAGTTGTAAAAACTTTCGCTTTGTTGCAAGAAATAAACTTTGGACCCGTTA
ATTCCTGAAACAATGGTCGAGTTTCAGAAAC