| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_2549534
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_38008 |
1 |
955 bp |
None |
Available |
Available |
LOC_Os06g45510.2, FRAME:-2, EVALUE:2e-14, 13106.m04798 protein thioredoxin, putative, expressed |
CDS Structure of MLOC_38008
Contig Sequence (3225 bp)
>contig_2549534 3225 assembly3_WGSMorex_rbca.fasta
CGCCGCCGCCAGCGCCCGCGGCAGCGCTCCGCTCCCCGCCGCGCCGGCCTACCCGCTCGC
CCCCCGGTACGGCGGCGGGCCCGGCCGCCGGTCGCCGGAAGAGGCCAAGGGTCGTCGGTG
GTCCTGCCCGGGCGGGCGGGGCGCCCCACGACGCTGCCCACCAACACCGGCAACACAGAC
AGACGCAGGCGCATTATTGGGCGCGAACCGAAGCCAGCGGCCGCGGACCGGAGACGCCGA
CCGCCGACCGCCGACGAGACCAGCCGGCAGCCGCATCGCCTCACCGTCTTCGTCTCACAG
TAACGAACCGGGCCGGACGCGCTCTGCGGCGTGGACCGATCGGCTGCCCCGTTCACGTGC
CGCCTAGCGTCGACGGACGGATGGATGGATGGATGGATTCGGTGGCGATGTGCGGGTGGG
TGGTGGTGTCACTTGGACGGGAGACACGCGGGCCGATCCTCTCCACGGGGAACAGGCTCC
AGCGGGCGGGAGCGTGCCCGGCGCAGCGGCGTCACTCACAGGCTCACAGTGGCCGCATGT
GTGGTGGCAGACCCGGCCGGACCCCCCACTCTCCTGCCTGGCTCGGCATCGCGTGCGCCT
GCAGACACGACAGGCTCGGGGCCGGTAGGTAACGAACGGGAGCAGGGCCGGACCCGGTTA
ATTTGGCAATGCCATAGGTTTCCTCGTGGTTGTGTGCACTGTGACACGCTCGCCGGGACT
AGCTTGAGTGAATTACTTAACTCGGCAACTCGGAATGCACAAACTCGTACTCCCTCTGTC
CCAAAATAACTGAGACGGAGGGAGCATGAATTAAAGAAAGCGCTATTAGAGAACCCTGAA
CGATGCAACCTAAACATAGATTCCTTTCCTTGCGGTGCGGTGGAACCAATCCTCTCAGGT
TTAAATCTCCGGACCTGGCACAGATGCTTGCATATATCTTATAAGATTAATAACAAAGCC
GTTTGGAATTAAGCCTTAAATTCAACGGAGGCCCGGACTGTCATGCGAGTCAAGCCGAAC
CATGAGACAGGCAGTGGCTGGCTCCTGCCGCTGCCAGTTAGAAAGATTCCCAGATCCTGC
TTGCAGAAGCTGCTCCGTCTATGTTACTTTCACAGCCACCAATCATAACGACGAAGAAAA
CCTCGAGTTTCCACGACATTGCAGACTCTGATCATAAGTGTTTGACGTCTTGACTTACTG
TTGGCTTTACAAGCACAATTCGTGATGTCGAGAGCGTTGCGTTCTCCAAAGACTCACGCA
ATTGCCAGGCCAGGTTTCGCTGCTAGATCAACTGCAGGACTCGAATCATCGTCTTTTAAG
AAAGACCGAAGAGACAAGAAGATGACAGTCCAAGATAGGAGTAATAGTTTGTGCCCAAGG
CCGAGACCACAAGCAAGTCAGGCCCAACCATCAGAAACGGATAGCTGCGCCACACTATGG
ACAGATTCACAGATGCTCCTAAATACACGTGCATAAATTGGACAAAAGCTGTGCTCACAA
GGGCATTAATTCAGATTTCGATGTTTTTCAGATAAGATGTATCGAGATATCTAAACAAGG
TCGAAAGGCATCAAAAACGCCGATTCAAATCACAACATTACAGCGTATTCAACTCTTCAT
GCAAAAGAACTGTCCCCCCGTCCAAGTCAGTCACTGTTGCCTGTGCAAGTAGAATGTACA
ATGTCAAGAAGGCTGCCATATAAAGTACTGTATAATGTCAAGAGTATCCCAATACAAAGT
AAATGGCCAAGTGCTGGAGACATGTTTAATACGTAGCATATTTACGTTTGTAGTTGAGTA
CAAGATTCAAACTATCATTGGCCAGGCTTGTTTATTTTCGTTTACTTCACCGCAGATGAG
ATCATTCAAACAGCAGTGTACTGATTGTGTAAGAATTAAAAGGAGGACGAGAACAAAGCT
AATATCTTACTTGTGAAGACTTTCCATGGCAGCTTCAAGCTTCTTCACGTCAGCACCAAC
CACTTCGCTGCTCTTCTCGCCTTTGTGATAGAAGTGGAAAGTTGGCTGTGCATGATTCGC
CATGAGTCAAATATTTGGATTAAGAATTAGGATGAAGGTTGGTAAGAACCATGTTTATGC
AAATACACAAACATGCTGGGAGAAAGGATATTCCTACAATCATGGCTCTCTCCTCAACTG
AACTGAACGAACATGCACATATGTATGCATCTAACAAATTAAGGTTGAATCATTGTATTC
TCAGATTCCTCCAGTAAGAACCATGTTTATATGAATACACAAACATGCTGGGAGAAGGGT
AATCATATAATCATGGCTCCTTGTTTAAGTGAACTGAACAAACATGCATGTACACATAAC
AAAGTAAGGTTGAATCACTGCATATTCTCAAGACTCCTCCAGTCACAAAAACATATGCAA
CACATCATTACCAAGAAACAGAATGAAAGTACTGCTAAAATTTATATCATAAAAATGAGA
AAAGAATGTCATGAATTACAGTTTCAGGCATGCAACTTACAATAGAGCATATTTTCAGAT
TACTAAGTCTGTTCCCAAGCCCCTCCTGCAGCACAAAAGGAAAAGAAATCATGCATCAAT
AACCAAGTGGAGGAGCAGGCATAATGCTGAGAAAAATAAAAATAGCGACAACAACAACGG
CTTTTTATGTATTTGGAATGCATTCAACCCTGCATGTACTGACAGCTGTCGTGGTGTTTA
TTCCCAATAAGACAGCCAGTTAACAAACTGATCAAACCAGTCTAATATTTGTCCCCTTTA
CACGCAATCACAAATTCACAAAAGAGTAAAACCACTGCAGCAGATTAACAAACAGTTGAT
TCCGGATCTTGGATCGTTCCTACTTAAAAGTACCATGCAGATATGCACCAACTTTCAAGT
CAATCTGCCTACTGTAAACAAATGAGCAACCCCATACATGGAAACCATGAACAGCTATGT
TTTAATAGGATTACTAAATACTAAATTGCATCAGGGCTTCTATAATATGTTAGTGAAGGT
AAATGGTCTAGATTACTAGACTAATTTGCAGAACTAAGAGCAGACTAGCTACGAAGCAAC
TTCTACAATCATCCTTATCAACAATGGATGCTGCTAAGCACTAATTTCATGTGTTATCAA
AAGTTGTAGACAGAAGGTGGTAGAGGCTAGGGTTCTACCAGGTCTCGAACGTAGGTTGTA
GGAGTGGAAGTGCGGGCTGCGAGGTTGGGGACGCCGGCGCCGGCG
