Contig Data
morexGenes
Links



Map Locations of contig_2549524 (3572 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2549524

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_38004 2 2789 bp AK371185 Available Available None





CDS Structure of MLOC_38004






Contig Sequence (3572 bp)

>contig_2549524 3572 assembly3_WGSMorex_rbca.fasta
GAGCTGGCGCGGGGGCGTCCACGGCGGTGGAGGCCGCCGATGTGGTCGGTTGGGTGGCGC
TGCGGCTCCGAGGAAGCTGGCCGACGGTGCTGCAGGTTCTGCAGCTGCTCAGGGAGCAGG
GCCTTGTCCTCGCCCTACTGCTCGGCCTCTCCGCCTTCTTCTCCATGGCCGAGACCGCCA
TCACCACGCTCTGGCCCTGGAAGGTTCGCGAGCTGGCCGATAAGGAACCCGAGAACGGCG
TTTTCAAAATGCTCCGGAACGATGTCACTCGCTTCCTCACAACCATACTCATCGGCACGA
CTGTGGTCAACATTGGCGCCACAGCAATTGTCACCGAGGCAGCCACGGCGATGTTTGGCG
AAGCAGGTGTCAGTGCAGCTACAGGCGTCATGACTGTTGCCGTTCTGCTTCTTACAGAAA
TCACGCCCAAAAGTGTTGCAGTCCACAATGCCACAGAAGTTGCCAGGTTTGTGGTCAGGC
CAATCGCTTGGCTTTCAATCATCCTCTATCCCGTTGGCCGGATTGTTACAATTATATCCA
TGGGAATTCTGAAGCTCCTAGGCCTGAAAGGAAGAAGCGAGCCATATGTGACTGAAGACG
AACTGAAGCTAATGCTCCGGGGAGCGGAGCTGAGTGGTGCAATTGCAGAAGACGAGCAGG
ACATGATTGAGAATGTACTCGAGATTAAAGACACACATGTCAGGGAGGTGATGACACCGT
TGGTAGATGTGGTTGCAATTGATGCAGCCGCAACACTGATTGATTTCAAAAACCTATGGG
AAACCCACCAGTACTCTAGAGTTCCTGTATTTGAGGAGCGCATAGATAATATCGTGGGAA
TTGTATATGCAATGGACATGCTTGAATATGTGGAAGAGGCCGAGAAGTTGAAGGACATCA
CAGTGAAGGAAATTGCACATATGCCTATATACTTTGTCCCTGATTCAATGTCCGTTTGGA
ACCTGCTGAGAGAGTTCCGGATCAGGCAGGTTCATATGGCAGTGGTCCTCAATGAGTATG
GTGGAACGATTGGTATTGTGACATTAGAAGATGTGGTGGAAGAAATAGTCGGTGAAATCT
TCGATGAGAATGATTCAAAGGAGGAAATCCAGAAGAAAACAGGCAACATAGTAATGCTGG
AAGATGGAACATTTGTTGTTGATGCAAATACATCGATAGACGATCTATCTGAAGAGCTTG
TTGTTAAAATACCAGATGGCCATCAGTATGAGACCGTGTCTGGTTTTGTTTGTGAATCTT
TTGGCTATATACCAGAAGAAGGTGGGAAAATGCTTGTGATACTCGAAAGGGATAAAAGAG
AGGAGAACGATGAATATCAGGACGAAGGATCTGATAACCAAGATGGCCGAGAAACGACTC
AAGCTTATGAACTTGAGATACTTGAAGCTAATGCAAGAAAGGTTAGCAAAGTACGTTTCA
AGCCCATAAGCAGTGAATGTGTAGACGTTGACAACAAGGGTGTGAACCGGCTGATGTCAA
AAAAGATTATCAAGCGGAAGAAGAAGAACTCTGGTAATTCTTCCGACAGCGATGATGACG
ACGAGTGTCCTGATATAACAGAAAATGGTTGCCCTGTGGAGCCGGTTTCATACTCAGATG
ATAGTGCGGAGCTAGAAGATGCTGGCAGTTCTGTGGGGACAAGGTAACAAAGTAAGCAAT
TAGCACCATTGTGCTACTGCCAATAACCAACCTCCTGCCCCTTGTTGCATCATACAACCG
AAGAAGAGAAAAGAGGAGAAACATAGTAGGCGACGTAAAACAGCGGCAGTAAGCATTGAC
TGCTCTCGTGTTGAGTTGGGTGGAGTTTTTGTTTGTCTCGCTACTTTGGTCTGCTTGATG
TGTGCGTGTGTGAGGCTTTAGTGGTGGTAGTGGAGAAGAGCATTGTGCGTACTTGTAAGC
AGCAAGTTTGGTCGTGGTGCAGCTCTTAAACAAAAAAGTCAATTCCTGGATCCGCCATCG
TATATGGGGGCCGTCCATGAGGAGACCAATAATCTAGTTTCCATGAATCCTAAGTAATAA
TCTAGATAGGAAGCTTGGAATAGTCCCTGTAATTGTTCCAACTCTATTGATGTTTGGCAA
TTTGAATTAAGAAAATTTAAGAAACCATCCCAGGGTTGGAGTGCTAACATAGAGGCTGCA
ATGAGAGACCATAAGAGCATGCTAGAATGGAGGAAGTTATTGTAGAAATAAATAGTTCTC
GGGTGATGGAAGAAGCTAAGGCTAGAGATCACACATCTTACTAATCAAAGGGAGAGGAAA
ACCCTAGTCCATGAACTAGCGGGACATGAGGGCATTGTAACTGAAGTGGAGGATGATAGA
GGTAGGAACTGATTACTACAAATATCTTTTTAGCTTCAGAACAGACCTGACAACATATCC
CTTAGAGAGGACTTCTTTAGAGAAGAGGAAAGCTGACTTAAGGAAAATAATTCACTAGAT
GCACTTTTCTCCGACGAGGAAGTGGAAGATGTTGTTCTTTACTCTTATTCTGATGGAGCT
CTAGGCCTTGATGTCCTTTCTTTTATGTTTTAGCAAAAAAATATGGGATGCCATACTGAT
GATCTCTTAGCTGTTTAGACTGAACTTTGTCATGCTTACTCTCATTCCTAAGGAAGTTGG
TACTCTGACTATGAAGAATTCTGACCAACGAGCCTTTTGAATTCTGACCAATGAGCCTTT
TGAACTATAGCATCAAAGATTTTTTCTTCCTAAAATTCCTAAAAATATCTATTATAGTTA
AAAAAAGCGCTAGGCGTTAATTGTGTTTTTTGCCACCGCCTTGCGCTTTTCTGACCAAAG
CGCATGCTTATGCGCAGTTATGCGCTAGGCGTTTTGCTATCGCCTAGAGCTTAGACGCAC
TTAAGCGTTTGCTTAGGCGGGCCTTTTTTAACTATGATATCTAGGCCTCCTTATGCACAT
ACTCCTTCCGTTCCTAAATGCTCCCTCCGTCTCAAAATAAGTGACTAAAAAATGATTCAG
TTTTGTACTAACTTTAGTACAAAGTATAGTCACTTTTGAGTCACTTATTTTGGGACGGAG
AGAGTATAAGATATGTGAGCTTATCTCTATTTTCTTAGTTTTGTATGCATCTAGACGCGT
TTTAGTGTGTATATTCACTCAGTTTTAATCCTTATGTAGTCCATATTGCAATATCTAAAA
CATTTTATAATTAGAAACGGAGGGAGTACTAGTTTCCGTAATTGGTGGCTTTGATCAAAG
GCAGATGTATTTTAGAGAGTGTGGTGATTGCTCATGAAATTCCATCAACTCTAAACATGA
ACAAGGTTTAGTTCTTACACTATACTATGATAAAGCGTATGATAAAGTCGATTTGGATTT
CCCAATTGAAGTCTGGCTGACTCTGAGAGGCTTTAGTCCCAAATCGATCTTCTGGACCCA
GTCTTTAGTCAGAGGTGGCTGTGTTGGAGTCAAGCTTAGAGCAAGTACAATAGAGCTGNN
TCAGCTGGCTATAAGGAATAAACTAACATATTTTTGTTTAGTTAGATGAAAGAGAAGAGG
AGAGAGAAGGTAAGCAGGCTCTTAGCTAAGAG