Contig Data
morexGenes
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Map Locations of contig_2549486 (4347 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2549486

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37991 1 294 bp None Available Available None
MLOC_37990 1 2203 bp AK354459 Available Available None





CDS Structure of MLOC_37991






CDS Structure of MLOC_37990






Contig Sequence (4347 bp)

>contig_2549486 4347 assembly3_WGSMorex_rbca.fasta
GCCGGCTGTTGCCACCGCGTTTGCTTCGCACGGGGTGCACTTTATCAGGCTCCAGCGCCA
GAGAGCTGTAAGCAGCTTCTGTTTCATTCTATACAGCTTCTGTTCATTCATGTGCCTGCA
CTGCATCGACTGTTTGATTGACGCAGGTGCTTTTTTTCTTCTGTATGTAGAGTGCGTTGC
TGCAGAGGCCTACGGTGAACTGCGGGTGGTGCGAGCTCCGTGGTGCTGGCCCGTCTCGGC
AGCCGGTGCTGTCGGTCAACTTCTCGGCGTTCCCTTCTTACTTCCAGGGCTTGCATTCTG
CGACAGCTCTTCGTTTCATATATCTGCCAGCCGTGATTCGCCGGGCCATGGGTTTGGCTG
GAGGAGCTGAAGAAGAATCGTATTCTCGAGATCATCCAGAGGTGGATTCTGGGTCTCCGA
GCACCGGGGACGCCACACCCGCTGTCGGATCTTACGGAGCGGTTCAGGATTATGTGCCCC
TTGAGCAAGCTCCAGGAGTGGTGCTGCATGGTCTGCGGCTGAAGAAGCACCAGAGGAAGC
GAAGCTCGATGAGGCATCCCCTGAGCCGGCGCCGCCGTCTCACAGTGAGATTTTCTGACA
AGGAAATTGGAGTGAAGGAGGGCACCGTGACCTCTCAGACGGAACTGCAAAATCCACCAT
TGACCGGAGGCCCTGAGGTTTCCGAGGAACCTGTCCAGCCCAAGCCAGCAATGGAAATTT
CTCTTGATCTGCTTGATAACATGGATGACAGCGATGTCTCGACGCCCATGGGACCAAGTG
GGAAGCAAAAGAGGTCTTTTTTCAAAAGTCCCGTTGACCGCACGAGTGAAAGGCCGGCCC
TGTCAGAGGTTAGGCAGAATATAGATACCTTCCGCTGCAAAGCAAACCTCTTGATTATTC
AGGCTGATAGGTGCTGGAGGGAAGAGGGAGCTGAAGTTATGCTGGAACTATCAAACTCCA
ACGGGTGGTGCGTGGCTGTGAAGCTACACGGTGTCACTAGAGTCTCTCTTAAGCCTTCAG
AGCAGAGGTTCTATGTCGTCAACCGGCACACCCATGCCTACGTCTGGGCGGTCGAAGATG
GATGGAAGCTTGAGTTCCCTGACAAATGGGACTGGCTTTTATTCAAAGAATTGCACATCG
AGGGCCGGGAGCGCAATTCTCAGGGAAAGATCATCCCGATTCCAGGTGTGCATGAGGTTT
CCGATGGCATGGGAGGGACTGTAGCAGATCCTTTCTCACGCCCTGTGACAGACTATATCA
GAACGGCGGATGATGAGGTTGCGCGGGCCCTCTCGAGAGATTCAGCTTATGACATGGACT
CGGAGGATGAGGAGTGGCTCATTCAGCTGAAGCATGGGCCTTCCGATAGAAGGAGGACCC
GCCTGAACCAGATTTCCTACGAAGATTTCGAGAAATTAATAACCTTGTTCGAAAAGGACG
CCTACAATAATCCTGAGGAAGCTAATGATGTGGATCAGCTTCTCTCCAGGCATCCTGCTT
TAGGCAAGGGTGACAATGTCCTTGCCATATACGGATACTGGACTAATAAGAGAGATAAGA
AAGGCACACCACTGCTTAGGATATTTCAGGTAAAGCCGGAGTATATCCCTTGCCTAATCC
CCTGATGTGATCTTTACCGCAACCATCCTTTTTATTATGCCTTCTTTCATATTATCTAAC
CCAGCGAAATTGATTTTCCAAAGGGTGCACCTGCTGTAAGGCGAGGACGGCCGTCGCAGA
AATCTTCTGTAAAAAAGAAGAGATCCGTGAAGAGACCACAAAGAAGCCAACCTGGCCGTG
GGAAGCCTGGGTTCTTCTTGCAAGGTATTTAAAGCTCTGTAACATGCCCTGCTTTTGGAT
GCCGCAAAATCATTTTTTTAAAGTTTGCTGTACACAAATCGTGATGCTAGAGATCTTCTG
TGACAGGGAACAATCAATGTCTTGTCTTTTTACGTTTTGCCATTTGACATAGTAACAATT
AACCTCATTATGACCGAACATAGTGAACATTGCCGAGCTCAAGATATAGTATGTCTGTTG
GCATTACCTTGGTTGTATATCTATTCTACCTCAGCATTCAGTTGCTGAAGTTATGGAACA
ATCTAACCTGTAAGGTATTTAAAGCTGTGTAACAAGCCCTGCTGTTGGTTGCCACAAATA
TTTTTTTTGTTGGCTTTGCTGTATTCAAGTTGTGATGCTAGAGATCTTTTTATGGGAACC
ACCAATATGTAGTAACTTTTATTTATGTCTCGGCCTTCTCCATTTGCCATTGGACATTGT
AACAACCAGAGCTCATTATGCCCGAACATAGTAAACATCATTGTTCCCAATACATAGTAT
AACCACCCCCTTAGTTGTATATCTACTATACCTTAGCATTCAGTTGCTGAAGTTATTGGA
CAGTCCTGCTGCGGGTATTTAAAAACCCTGCTGTTGGACAGCACAAAATCTTCCTTTGTC
TTTCGTGTAGTCAGACTGTGATGCTAGAAATCATTTGTGACAGGGAACCACCCGTACACT
TGATGACTTTATAATACGTGACGTGTATGTCTTGTATTTTTGTGTTTGTCATTTATTTGA
CAATAGTATCATTTAAACTTCATTATGCCTGGATGAGCGTAGTAAGTAGGCATCATCGTC
GCCGGCGGAGCTTAGTGTAGTCTTGGGGGGGAGGGGCACAGCCCTCCCAGCTTTGCACAA
TTCTTTGAAGGAAAAAAAAACAGAGGGATTAGTTGAAAGAAAATTAATAGTTTACTTCCT
GAAATGTTCACTGATCATCGTGCTCAAAATATAGTAGTAAGCTTGTAATCATCCTCTTAG
CTGTATATCTATCATGCCCAAAATATAATTCATTCAGCTGCTGAAGTGATGTAGAACAGT
CTTATCTGGCCTGTACTCATCATCCTTGTGTTGTGCATTCTGCTGTGTGCAGGTGGCGAA
GGTGAGGCCTTGCAGAGGGTGGTGGAAGCCGACCGTGCCGCGAAACAGGCCGTAGACAAG
GCCATCCAGCTGCGCAGCAGAGCCCAGGCCCTCATGGAGCGGGCCAACCTGGCGGCGTAC
AAGTCGGTGATGGCCGTGAGGATCGCCGATGCCGCGAGCGTGTCTGAGAGGTGCCGGGAC
GTCGTCTGGAGGAGCCTCGACTAGGCCTTGCTTCTTTCTTTTGTTCCCGCCGCATGTGTG
ATATCATTGGCTAGTCTGCGAGGCTGTGTTTTTTTTTCGCCCCATCCTCCTCTCCTCCGG
TTGTAACTATGCGCAGAAGAAGCAGAAGCGGAAATTGATGGGTCCCGGGTCGGACTCGTA
GACAAAGAAACTGTAATTCGTTTGTGTAAATGATATAGTTTGGTAGCTAGATGTTGGTGG
ATGGATGGATGGATCCGTGCCTGACGACTCTGTATGTTATATGTAGTGCCCATGTTTTGA
CAGAGAAAAAAGATGAGGTATTGTTAGATCATAGAGGAGGTGAAAACAGTTGAATGAATG
AACGAGTGGATGAATGGATCATCTGATCTGATGAGAGTGGCGTAAATGCGATTTTCCCTG
AAACCTCCCATTATGAATGAATCATCTGATCTGATGAGAGTGGCATAAATGCGATTTTCC
CTGAAACCTCCCATTATGAATGAATGAATGAATCATGTGATGAGCTGTGGGCCTGTGGTT
TTGTTTGTTTGTTTGTTTTATCAACAGAGAAGAGATTGGCTTTAATCTTGGAGGATGAAT
GGACCTTGATGATCATCTTCTACTCCCTATGTGAATAGTATAGTAAGCTGGAGAGATAGA
TAGGAGGATGATCATCTTGTTTAAAAAAAAATTATATCATTTCATTATCTTGGGAAAGTG
AAATCTTGTGTTCGATTAACCTTGTGGGGGGTGTGAAGTCTGATTTATTTAAAACGAACG
GAACCTCGCCTCTGTATTTTTATATATACAGTATAAATTTGTGTATATTTCACAGCTTGT
TACGTGCTCCCTTCGTTTTAAAATAAGTGTCTTAAGCTTAGTGCAAAGTTGAGACACTTA
TTTTGGAACGGAGGGAGTACAATTTTGTATTAGAGCTAGTACAAAGTTGAGACAGTTATT
TTGAAACGAAGGGAATATATTGTTGCAGTCTTTTTTTTTTATTCATAATAGGAAAAAAGA
TGAGTTGCAAATGCAAAAATGGTAACTTTGAAGATGATGAAAACATGTGGCGAGAGGAGG
AGAGGAGATGAGATGAGATGATCCGTCTCCAGACACACATGAGGGCGGAGGTGTTCCTCC
TCTCGTCTCGCCTTATCCCTCTCTCCTCCCCACTCTTCCCCACTCGACCCACCCACGGCC
ACCGCCGATGATGTCCATCACCTCCAC