Contig Data
morexGenes
Links



Map Locations of contig_2549485 (3951 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2549485

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37989 3 2247 bp MLOC_37989.3 Available Available LOC_Os12g08090.1, FRAME:+2, EVALUE:0.0, 13112.m00853 protein amino acid transporter, putative, expressed





CDS Structure of MLOC_37989






Contig Sequence (3951 bp)

>contig_2549485 3951 assembly3_WGSMorex_rbca.fasta
GCTCCTATTTTTTGAAATGTATATGTAATTTGTGCGTGCTGTGCTCGCTTTATTTTTAGG
CGTCCAGCAACGCACGCACGCTGCATTATAACGCGGTCGTTGGAGCCAGCGTCTATCACC
ACGCTAAATCAGCCAAAGCACGTGCGACAAACATATTTTTTAGATCCGATGCACGGCTGT
TGGAGATGCTCTAATATTTTAACGTCAATTTCGATGCTAGTTGGGCAGAGAGCACCGGAA
GCACTGCAAGTGCAAGTGCTAGTGCGATGGGAAACACGGGGCTACATATACACCTCCCCT
CTTCCCTCCCATTTCCCCCACCCACACACACACCTCCTCGCCAAGAAGTCTGATCTTAGG
CCGTCACACGCACCAAACTCCATCAGTTCTCTCCACGACAACTCAAGCTAGCTGAGGATT
GTCGAATAGCAGCACAATTTAAGTGATGGCGGTAGGCAACGGCGGCGCCAAGAAAGTGGT
GGCGCCAATGGAGGTGTCGGTGGAGGCCGGGAACGGCGGGGACGAGGCATGGATGGACGA
CGACGGCCGGCCACGCCGCTCCGGCACGTTCTGGACGGCGAGTGCGCACATCATCACGGC
CGTCATCGGCTCCGGCGTGCTATCGCTGGCCTGGGCCATCGCGCAGCTCGGTTGGGTGGC
CGGCCCCGCTGTCATGCTCCTCTTCGCCGCCGTTATCTACTACACCTCCACCCTGCTCGC
CGAGTGCTACCGCACGGGTGACCCGGCCACCGGGAAGCGCAACTACACCTATATGGACGC
CGTCCGCTCCAACCTTGGTGGTCCCAAGGTCATCTTCTGCGGTGTCATCCAGTACGCCAA
TCTCGTCGGCGTCGCCATCGGCTACACTATCGCCTCCTCCATCAGCATGCGGGCCATCAG
GAGGGCCGACTGTTTCCATGCCAATGGACACGCCGACCCTTGCAAGAGCTCCAGCAACCC
ATACATGATCCTCTTCGGCCTCGTGCAGATCGTCTTCTCGCAGATCCCCGACTTCGATCA
GATATGGTGGCTATCAATCGTCGCCGCCGTCATGTCCTTCACCTACTCCGGCATTGGACT
CTCCCTGGGCATCACCCAAACCATATGTATGTCGTCGGAACTCCAAGCATACCTTTTTTT
TTCTTTTTCTTTTTGTCCTCTCAACTTATATACAGTACTTACGTAATAAGTTAGGAAATC
CTATACAGTAAAATAAGACGATACTGTAATTGCAGCCAATGGTGGAATCAAGGGCAGCCT
CACAGGCATCAGCATCGGCGTCGGTATCACGGCCACGCAGAAGGTGTGGCGCAGCCTGCA
GGCATTTGGCGACATCGCCTTCGCCTACTCCTTCTCCAACATCCTCATAGAAATCCAGGT
ACGTAAAAGCTAGCCATGACCGGCCTGTGCTCTGCTCAACGAGGGTTTTGCTCTGCCTTT
GTTGCCGCGGACTGACATATATAAGGGGTGTTTCTCAGGACACGATCAGGGCGCCGCCGC
CGTCTGAGGCGAAGGTGATGAAGCAGGCGACGCGGCTAAGCGTGGCGACGACGACAGTGT
TCTACATGCTGTGCGGGTGCATGGGGTACGCGGCGTTCGGCGACGCAGCCCCCGACAACC
TCCTCACCGGCTTCGGATTCTACGAGCCCTTCTGGCTGCTGGACATCGCCAACGTGGCCA
TCGTCGTCCACCTCGTCGGCGCCTACCAGGTCTTCTGCCAGCCCATCTTCGCCTTCGTCG
AGCGCTGGGCTGCGTCCACATGGCCCGACAGCGTCTTCATCTCCCGCGAGTTCCGGGTGG
GGCCATTCGCGCTCAGCGTGTTCCGGCTCACGTGGCGGTCGGCGTTCGTCTGCCTCACCA
CCGTCTTCGCCATGCTGCTCCCCTTCTTCGGCAACGTGGTGGGACTTCTGGGAGCCGTCT
CCTTCTGGCCGCTCACCGTCTACTTCCCCGTCGAGATGTACATCAGGCAGCGCGGCGTGC
CCGGGAGGAGCACGCAGGGGATCTGCCTTAGGATGCTCAGCGTCGGATGCCTCATCGTGT
CCATCGCCGCCGCAGCGGGCTCCATCGCCAACGTTATCGAAGCGCTCAAAGTGTACAAGC
CGTTCAGCGGCTGATTAGCACCACCTGCACCAATTCCCCTCCCTACCGAAATGATTATAG
TTGAAAACAACTATAATTATTTACATACAAAGGAAGTAGTTATAACTGTATGCAATACAT
ACATTACATACACCGCTAAACGTTCGCCGAAAGGCCCTTGTTGAACCTAGTTATAGTACC
TAACGGACTGGGCGGCCTTTGGTTGCATTTTCTTGGAAAATGAGGGGCCTATGCTGAACG
GCAGGAGGTGCTCTCTGTAACGAAGAGTAAGAGCGTAGCGTGCCCTATGCAAAATAGTTC
CGTTCTTTGTGAAGGGATTCTAATTCTGTACCGGAGGAAAAAACATACAGTACATATGCG
CTTAAACATGATTAAAAAAATCAGTTTTGCTAAATCTTGCACGAATTCGCTCAGATTTAG
TTATATCTCAGTCGATGTTATATTTACATGATCTACGGGAATGTTGTCACGGAATTTTCC
TTTTAGTTTCCCTTTGTTTTTAATTCTATATAAGCATGTGGATGATGTCACTCAACAGAG
ACTTAAATCTCAATCGATTAAGACCTAGCCACATAAAAAAAATCCTTATGCCTCAATTCT
TCTAACATTTATATATAACATTCTAATATATGTTGTTACGAATAGTTATAGTTTTTGAAA
TCGTGATAGAGACCAACTGTGGTTGAACCAAATGTGAATATTTTGGGGGTTCATTGAAAT
CAACGCAATATCCGTAATCTCAACAAGATGTTTTGAACCTTGATGAAATCATTTGCGAGG
TGCAAACCATTGCTCATGAGCTTATAAAGAAATGTCAGGTTATCTTACTTTAACTTGTGT
CCTCTCCCACAAAAGGATATGGTCCAAGGTATTTGAAACAAATAATTGTAGAACACTGTT
TACAAAGAATAACTGGATTAGCAAGTGGGGAATCTTAGGTAGATCATTGATGATAAGCTC
TTTTCTCTCATCCAAAGAAGAAATGGGTGGACAGACAAGTAGGATGGGTACGCATGGTAC
TAGTCACGAAAGCGCGCTCACATGGACCATTTATGTTGCTTTCTTTGTTTTCTTTGCAGG
TATGGAAAATGAAAAGGAACGGTCAAGCAAACTTGGAATCCTTCCATTTGCTTCTTAGAT
TATACTTCCTCCGTTTGAAAATATTTATTTTTAAGATAAATTTATTTAAATTACTTTTAG
TTATAGATACGTTTATTTTATTTATTTTTAGACCGATATTTTCAAATGAAGGGAGTACTT
GTTTGTGATAATTGGTGACTGTATAGCTGTCCTGTTCTGTTTAGCTGCTAGCAGCACGGG
GTATATGCCAAATCTGGCCATACAAAATTAATGTCAAACTTCAACTAACACGGCCCTTCG
AAAGAAGAGAGAGTTAATTTTCTTGCATGAACACATAGGCAATAATAGAGCCAATGGTAG
CGTGCGTCTAAGGCCTTGTTTGGAACCACTCATATTATCTCTTTCTAATAATAAAGCGTT
GACTGCTTCTGTCGTCCGTCGTGTCACTTTTACAAAAAAAAACTCTAACGTTTCCTGAAA
TCAACCCGCAGTCTAGATTTAAGTCAGAAAACGAATCCTTTTTTTGCATTTTTTAGAAAA
GCCCGTACTGTTTTAGCTAATCAACTCGCAGTCCGGATTTAAGTCAGAAAACGGATCTTT
TTTTGCATTTTTAGAAAACTCATTGATGTTTCACGTAATCAACCCGTCCTCCGTATTTAA
GTCAGCCGAAATGTTTTTTGTTTTAACAAAAAAACCCTGACTTTTCACTTAATCAATGCA
CATTTTATCTAAAACAAAATTATCGATATATTTTAAACCGTAACTCCGATT