Map Locations of contig_2549410 (3745 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2549410

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37956 2 849 bp AK361815 Available Available None





CDS Structure of MLOC_37956






Contig Sequence (3745 bp)

>contig_2549410 3745 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGCACGGCTAGAGATGCTCTAACTTAACATGCAAATTTATCCCCA
AACTCAAACCAAACCAACAGCACAACATATGAAACCATCACCACTTATTAAAATATATCC
TATACTTCATTCAATTATTACGGTTATGCTTCGCCTGGGAGCATCAAACAGGCGAGTCCT
CAGGCTTTGGGCAGTCCGTTCTCTGCTTTTGTCGCAGCAGCATGTGGAGGCCATGGCGCG
CCAGCCATTACTGCTTCAATTTCCCAGATCTCCCGGGGGCAATTCGTCAGGTTCTTGCAT
CCTTGCCCTGTCACATACTGCATCAGTGGAATATATTGTTAGCATGGAAATAACACGGCT
AACACTTTGCAAAGGCCAATGCAATGTGGATGGTACAGAAATTACTGTTGAATTTGGCTG
CTGCACTTTTACTTGAGAACAAAGAAAAAAAATGAAACTAAAACCTAACACAGCTGCGTT
AACATAGTGTGGTTTTCAGCACAATTGATTTCCTTGAACAAGAGGGAGGGAGGGAGAGAG
AGANNNNNNNNNNNNNNGGGAGGGAGGGAGAGGGAGAGAGATTACCACAGAACTAGTTTA
GGCTCGCTAAGCTTTTAACGGTTTAAAAGTTATCAATAAATGTAAAATAAATAGTAGAGC
ATCACTATAATGTAATAAGATGACCAAAGGGATTGTGAAAATATGCATTTATATGTCCTC
GGCAAAAAAGACAAAAGTTTCAGCTCACTGTGACATAAATATATACCAAACCATTTGTTA
TTTTTGTCCAAGTCACAGATAGTCATATTTTCTAATCGCACCGTTGGATCATCTTATGAT
ATAGGTGTGTTGTTTCAGTATTTTTTCAGAATTTTTGAGAACTTTTACATCGTTGAAAAC
CTTGACTAGTTCTGTGGCATTGTCAATTCAAACTTTACTGGACAGGTGTGGCCATTGACA
TCAATACGTAATATGCTTATCGAATTCTTTGTGTTCCACTATGAAATACTCCATTCACAA
ATATAAGATGTTTTAGATATTTCAGTATGTACTACATACGGACTGAAATGAGTGAACAAA
CACATTAAAATGTGTCTATACATCCGATTAAGAAGTTAGAACATCAGGGAGCATAAAATA
CATGTAAAGAGGTAAACACAAACTGTCAAATTCGTACTAGTATCTACTCAAACTTTACAG
GAGAAGTGTCCCGTTGTCTAATATGCTTATCAAGTTCTTTGACACCAGAAATACCAAGAT
AGCTGTAAAGTTGATAGAAACATATTGCTACATCTAAGTTAACTATGAGAAACGGAATAT
TCCAAGGGAAAAAATCAGTCCACCTTACAATTTAAAAAGTGCACGAAATTTTAGGATATG
GCACAAATTTTGACCAACTTTATTTAGAAAATTATGTATATCTACAATACCAAATATATA
CCATATGAAAATATATTCCATGATGAATCTAATTGTACCTATTTGGTATTCCAGATGTTG
GCAACGTTTTCTACAAACTTGGTTAAAGTGTACAAGGTTTGACTTCGAAAAAATCTAATG
AGCGCTATATTTTGGGACGGAGGGAGTAGAACTTTTCCAAGAGAGACCAGTAATAGAGCA
AATGTGTTGGCATTAGTTCGTACCTACTACAAGTTAGCCACTACAAGTAGCGGACTAGCC
GTGCACCAGCAATTAAGAGAGTAAAATTCTTTTACTATGTAATGGAGGAGAGGAACCAAG
ACATACCAGATCACTTTCAATACGAACACCACCAAAACTTTTGTACTTCTCAATCTCTTC
CCAGTTGAAGAACTTTGAGGAAATTGGATCATCTCTGGCAGGCCTCAGCAAAGCATCGAT
GAAATAACAGCCTGGCTCAACCGTAATAACCTGCAGTGCAAAAACCATGTGAGCTCAGAT
GCTTGTTATATCTATACGTAAGATGCCCACACACCCTTCTCAACATGGATGCAGAAAATA
CGGTACTATTCAAAGGAGGATTCACGACCATCTATTGTTCAAATTACATAATCTATGTTT
TCCTTAATTTCTTATCCTCGCCCTCAGATAGAATATGCTAAAATAGGAGGAGATATACAT
CCATATATATGTCGAAGACCTTTAGATGCTTCCATTCAAGTTTGTCATCAAAATATCCAT
TACGATTACTATATCACAACAAGTCTCAAGGCCTTGATGCCTAACTGCCTACACAAAGCA
GCTTGGATATGAAGAGTTGACAACAGAAAAGGTATCAACTTTCAGAAGTTGTGGCCTATG
ATGTTGTTCATTTAACCACAATACCAGGCAAATGTGACATATATAGTGGTTATGTGTGCT
ACTAAATGGTCAATAGTCGGTCCGAAAGAATACACATTAACAGAGTTCCAAACAGCTCAG
AAATTGTACTACCATCTTGTTTGAATACCCAAATGGTCAATAGTCTGTTCAAAAGAATAC
ACATATACAGAGTTCCAAACAGCTTATAAATGTTACTGGCTAACATGACAACCCAACCAC
TTCTCAAACAAGAGCGTGTGAAATTGCCAGAGTATTGTGTGCTACTAAATCTTCATAAAT
TAATGAGAAAGGTAATTATTTACCATCCCTTCTTTAAGTTCTCTTATGGTACGCAAGGAG
CTCAGTCCTGGCTCATTTGGCCTCTCTAAGCCCTAAATTCAAGAAACAAACATTAATCTT
GGTTGCAGGGAGGCAAGTATAAAGATTAAACTCGCATAGACATCTGTAAAATCCATATCT
CAACCTCAGGGTAGCCTCCGGGATCATGGGTGTCAATTCCAAGCAAGTGCCCAAGACCAT
GAGGCATGAAAACAGCACCCAACCTTCGAGCCATCATATCAGCAATATCACTGAAATAAT
TGGATTCCGGGGAATAGAAAAATCAGCATTGTAGCTTTACATATTATCATATTTAAGTTC
TATGAGCACAAATAATTTGCTCTCACACACGCACCCATGGATAATCTTTTCTTTCTTGAG
AGATTCAAGTATTGTCTGCTCGGCCAGCCTGCAAAAAAGATCAAATGGTGCGTAAGTCAT
TATAATAGACAAGGATGGAGAAACAGAAGAAAAAAGGGTATATCAGCATTATACATTAGC
AAAAGATGTTGCAAAATCTAACAACACAGAGGCCAACAGTAAATATTCTTGATATCAAAC
ATAGCAATGAATATAGTGACATTCTATGCATTGAAAATTGCACCCTAGAGGACAACCCAT
CAAGGATGTTTAAAAATTGCATGGTTCCGTAAGTAGCAATTGTTCTTACTTGTGCATATC
GATCCATTTTACTCCAGGCTGCATGTGTGATATGACAGCATTATGAGCCTTAAGGACAGC
CTGTAAAATAGTCAGTGTTGCATCAATAAAGATTTAAACAACCTGTCCAGGTTCCAATTC
ACATACAAGAAGAAAAGCACCAATTCTAACACAAGTACTTACATTGTATACTATTGTCTG
GTTGCTGTTGAACTTTCCATTTATCTGAAAAGACAAAAACTCATTCAGGTGATGTCACTA
GACAAATAGTATATTCAGATGTGATGATAAGAATGCTCCAGTTTGCATTGAGGTTTGTTG
GAAAGAAAACTTCTAGAATTACTCCCTCCGTTCCTAAATANAAGGTGTATTAGTTTTTCA
AAAAGTCAACCATTGTCTATGTTTGACCAACATTATAGCAAAATATATAAATATTTACAA
TATAATATAAAAATATATTTCAGGG